Mdm1 (transformed mouse 3T3 cell double minute 1) - Rat Genome Database
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Gene: Mdm1 (transformed mouse 3T3 cell double minute 1) Mus musculus
Analyze
Symbol: Mdm1
Name: transformed mouse 3T3 cell double minute 1
RGD ID: 1621610
MGI Page MGI
Description: Predicted to have microtubule binding activity. Involved in photoreceptor cell maintenance and retina development in camera-type eye. Localizes to centriole; centrosome; and non-motile cilium. Is expressed in brain ependyma; retina inner nuclear layer; and retina outer nuclear layer. Used to study age related macular degeneration. Orthologous to human MDM1 (Mdm1 nuclear protein); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; chloroprene; choline.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: age-related retinal degeneration 2; Ar; Arrd2; double minute 1; Mdm-1; mdm4 transformed 3T3 cell double minute 1 protein; nuclear protein MDM1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910117,977,446 - 118,004,904 (+)NCBIGRCm39mm39
GRCm3810118,141,540 - 118,168,999 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10118,141,811 - 118,168,997 (+)EnsemblGRCm38mm10GRCm38
MGSCv3710117,578,843 - 117,606,055 (+)NCBIGRCm37mm9NCBIm37
MGSCv3610117,544,825 - 117,571,990 (+)NCBImm8
Celera10120,092,487 - 120,120,063 (+)NCBICelera
Cytogenetic Map10D2NCBI
cM Map1066.65NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
centriole  (IDA,ISO)
centrosome  (IDA,ISO)
cytoplasm  (IEA)
cytoskeleton  (IEA)
cytosol  (ISO)
microtubule  (IEA)
non-motile cilium  (IDA)
nucleus  (ISO)

Molecular Function

References

Additional References at PubMed
PMID:2026149   PMID:2203673   PMID:3182840   PMID:3474784   PMID:7590734   PMID:7849395   PMID:8111118   PMID:8220433   PMID:8390965   PMID:8486363   PMID:8589516   PMID:10349636  
PMID:10712011   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11197690   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12766041   PMID:15226823   PMID:15747579  
PMID:16141072   PMID:16141073   PMID:21052544   PMID:21267068   PMID:21873635   PMID:23300604   PMID:26337392   PMID:32290105  


Genomics

Comparative Map Data
Mdm1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910117,977,446 - 118,004,904 (+)NCBIGRCm39mm39
GRCm3810118,141,540 - 118,168,999 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10118,141,811 - 118,168,997 (+)EnsemblGRCm38mm10GRCm38
MGSCv3710117,578,843 - 117,606,055 (+)NCBIGRCm37mm9NCBIm37
MGSCv3610117,544,825 - 117,571,990 (+)NCBImm8
Celera10120,092,487 - 120,120,063 (+)NCBICelera
Cytogenetic Map10D2NCBI
cM Map1066.65NCBI
MDM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1268,272,443 - 68,332,381 (-)EnsemblGRCh38hg38GRCh38
GRCh381268,294,566 - 68,332,362 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371268,688,346 - 68,726,161 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361266,974,613 - 67,012,379 (-)NCBINCBI36hg18NCBI36
Build 341267,005,167 - 67,012,350NCBI
Celera1268,352,374 - 68,390,189 (-)NCBI
Cytogenetic Map12q15NCBI
HuRef1265,739,499 - 65,777,306 (-)NCBIHuRef
CHM1_11268,656,328 - 68,694,144 (-)NCBICHM1_1
Mdm1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0761,165,652 - 61,200,865 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl761,165,640 - 61,200,879 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0761,161,294 - 61,197,124 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4757,455,598 - 57,482,092 (+)NCBIRGSC3.4rn4RGSC3.4
Celera750,507,908 - 50,534,254 (+)NCBICelera
Cytogenetic Map7q22NCBI
Mdm1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545814,780,437 - 14,822,954 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545814,789,842 - 14,823,117 (-)NCBIChiLan1.0ChiLan1.0
MDM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11268,588,541 - 68,626,359 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1268,588,541 - 68,626,326 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01265,803,548 - 65,841,404 (-)NCBIMhudiblu_PPA_v0panPan3
MDM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1010,524,328 - 10,696,181 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11010,523,656 - 10,552,824 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Mdm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365456,261,887 - 6,294,487 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MDM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl532,640,945 - 32,673,638 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1532,640,939 - 32,673,624 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2535,453,845 - 35,486,488 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MDM1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11163,926,950 - 64,082,149 (-)NCBI
ChlSab1.1 Ensembl1163,927,640 - 63,965,097 (-)Ensembl
Mdm1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248022,648 - 9,999 (+)NCBI

Position Markers
RH118338  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810118,157,003 - 118,157,176UniSTSGRCm38
MGSCv3710117,594,059 - 117,594,232UniSTSGRCm37
Celera10120,107,517 - 120,107,690UniSTS
Cytogenetic Map10C1-C3UniSTS
Whitehead/MRC_RH101234.31UniSTS
Whitehead_YAC10 UniSTS
M20823  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810118,168,281 - 118,168,437UniSTSGRCm38
MGSCv3710117,605,337 - 117,605,493UniSTSGRCm37
Celera10120,119,347 - 120,119,502UniSTS
Cytogenetic Map10C1-C3UniSTS
Whitehead/MRC_RH101234.31UniSTS
Whitehead_YAC10 UniSTS
MT905  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381027,014,268 - 27,014,395UniSTSGRCm38
MGSCv371026,734,074 - 26,734,201UniSTSGRCm37
Celera1027,943,340 - 27,943,463UniSTS
Cytogenetic Map10A4-B1UniSTS
Cytogenetic Map10C1-C3UniSTS
cM Map1021.0UniSTS
Whitehead Genetic1016.4UniSTS
D10Mit213  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381020,407,439 - 20,407,588UniSTSGRCm38
MGSCv371020,127,245 - 20,127,394UniSTSGRCm37
Celera1020,296,520 - 20,296,655UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic Map10C1-C3UniSTS
cM Map1011.0UniSTS
Whitehead Genetic106.6UniSTS
Whitehead/MRC_RH10211.86UniSTS
Whitehead_YAC10 UniSTS
UniSTS:236468  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810118,147,898 - 118,148,042UniSTSGRCm38
MGSCv3710117,584,954 - 117,585,098UniSTSGRCm37
Celera10120,098,590 - 120,098,734UniSTS
Cytogenetic Map10C1-C3UniSTS
D10Mit180  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810118,150,611 - 118,150,744UniSTSGRCm38
MGSCv3710117,587,667 - 117,587,800UniSTSGRCm37
Celera10120,101,304 - 120,101,511UniSTS
Cytogenetic Map10C1-C3UniSTS
cM Map1064.0UniSTS
Whitehead Genetic1067.8UniSTS
Whitehead_YAC10 UniSTS
M20823  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810118,168,220 - 118,168,357UniSTSGRCm38
MGSCv3710117,605,276 - 117,605,413UniSTSGRCm37
Celera10120,119,286 - 120,119,423UniSTS
Cytogenetic Map10C1-C3UniSTS
Whitehead/MRC_RH101234.31UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018383585125739363Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1019000000129800000Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024800000121200000Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039300000129800000Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039300000129800000Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045600000120800000Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059500000122500000Mouse
13208560Wght9_mweight 9 (mouse)1060000000121000000Mouse
26884430Zlq5_mzygomatic length QTL 5, 10 week (mouse)1068000000125000000Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069900000132500000Mouse
11353832Pcholq4_mplasma cholesterol QTL 4 (mouse)1074151384125680038Mouse
11353843Gluq1_mblood glucose QTL 1 (mouse)1074151384125680038Mouse
1357779Tesq3_mtestis weight QTL 3 (mouse)Not determined1084243786122205623Mouse
4141479W10q8_mweight 10 weeks QTL 8 (mouse)Not determined84243786122205623Mouse
4141387Lgaq5_mlate growth adjusted QTL 5 (mouse)Not determined84243786122205623Mouse
4142496W6q8_mweight 6 weeks QTL 8 (mouse)Not determined84243786122205623Mouse
4142365Egq9_mearly growth QTL 9 (mouse)Not determined84243786122205623Mouse
1357594Estoq3_membryo survival total QTL 3 (mouse)Not determined1084243786122205623Mouse
1357622Espq3_membryo survival preimplantation QTL 3 (mouse)Not determined1084243786122205623Mouse
1357638Cia29_mcollagen induced arthritis 29 (mouse)Not determined1085619118118661448Mouse
1300797Sluc22_msusceptibility to lung cancer 22 (mouse)Not determined1086877747120877895Mouse
1301520Uvbi1_mUVB induced immunosuppression 1 (mouse)Not determined1087073224121073368Mouse
1300908Insq4_minsulin QTL 4 (mouse)Not determined1087073224121073368Mouse
1300921Skl4_mskeletal size (tail length) 4 (mouse)Not determined1088252393122252530Mouse
4142386Tgq20_mtriglyceride QTL 20 (mouse)Not determined89000595123000595Mouse
1301758Fcsa3_mfemoral cross-sectional area 3 (mouse)Not determined1090091790124091893Mouse
11039516Ltpr5_mLeishmania tropica response 5 (mouse)1090671039125739363Mouse
13208554Lgth11_mbody length 11 (mouse)1091000000121000000Mouse
4142461Bmd25_mbone mineral density 25 (mouse)Not determined1097381196130694993Mouse
1357544Vtbt10_mvertebral trabecular bone trait 10 (mouse)Not determined1097381196130694993Mouse
11533919Mvb4_mmodifier of vibrator 4 (mouse)397381196130694993Mouse
11533921Mvb2_mmodifier of vibrator 2 (mouse)1097381196130694993Mouse
12880413V125Dq9_mvitamin D active form serum level QTL 9 (mouse)1097700000130694993Mouse
4141402T2dm1sa_mtype 2 diabetes mellitus 1 in SMXA RI mice (mouse)Not determined97922739130694993Mouse
11040593Lmr5e_mleishmaniasis resistance 5e (mouse)1099384730130694993Mouse
11040595Lmr5c_mleishmaniasis resistance 5c (mouse)1099384730130694993Mouse
11040597Lmr5a_mleishmaniasis resistance 5a (mouse)1099384730130694993Mouse
1301968Estq4_mestradiol regulated response QTL 4 (mouse)Not determined10101150611130694993Mouse
1357744Cfbw4_mcystic fibrosis body weight 4 (mouse)Not determined10101150611130694993Mouse
1301901Im5_mimmunoregulatory 5 (mouse)Not determined10101661259130694993Mouse
4141361Cfmq3_mcystic fibrosis modifier QTL 3 (mouse)Not determined10101661259130694993Mouse
1300678Leg2_mlongevity extending gene 2 (mouse)Not determined10102671003130694993Mouse
27226725Tibw1_mtibia width 1, proximal, 5 week (mouse)10102900000123400000Mouse
1301895Exq1_mexploratory and excitability QTL 1 (mouse)Not determined10103011947130694993Mouse
14696727Kidrq2_mkidney weight, right QTL 2 (mouse)10103066603130694993Mouse
4141007Obrq10_mobesity resistance QTL 10 (mouse)Not determined103407822130694993Mouse
4141487Tgq21_mtriglyceride QTL 21 (mouse)Not determined104274116130694993Mouse
14746996Manh69_mmandible shape 69 (mouse)10104927733130694993Mouse
1357482Nhdlq4_mnon-HDL QTL 4 (mouse)Not determined10105205399130694993Mouse
1300679Nociq2_mnociceptive sensitivity inflammatory QTL 2 (mouse)Not determined10105205399130694993Mouse
1302200Sle12_msystematic lupus erythematosus susceptibility 12 (mouse)Not determined10105205399130694993Mouse
4141269Ipng2_mimprinted postnatal growth 2 (mouse)Not determined105252393118661448Mouse
11040594Lmr5f_mleishmaniasis resistance 5f (mouse)10105343808130694993Mouse
11040596Lmr5d_mleishmaniasis resistance 5d (mouse)10105343808130694993Mouse
11040598Lmr5b_mleishmaniasis resistance 5b (mouse)10105343808130694993Mouse
4142089Obrq9_mobesity resistance QTL 9 (mouse)Not determined108680038130694993Mouse
4141153Ltgq2_mliver triglyceride QTL 2 (mouse)Not determined108680038130694993Mouse
11039496Ltpr5b_mLeishmania tropica response 5b (mouse)10108739225130694993Mouse
11041664Lmr25_mleishmaniasis resistance 25 (mouse)10108739225130694993Mouse
11049563Lmr25a_mleishmaniasis resistance 25a (mouse)10108739225130694993Mouse
11049570Lmr25b_mleishmaniasis resistance 25b (mouse)10108739225130694993Mouse
27226722Tibw7_mtibia width 7, proximal, 16 week (mouse)10108800000125600000Mouse
27095902Scvln11_msacral vertebrae length 2, 10 week (mouse)10110200000125600000Mouse
11353822Insq12_minsulin QTL 12 (mouse)10110617486125680038Mouse
11353823Homaq2_mhomeostatic model assessment QTL 2 (mouse)10110617486125680038Mouse
10412078Hylaq3_mHyperlocomotor activity related QTL 3 (mouse)Not determined10111732321118150744Mouse
26884391Skwq11_mskull length QTL 11, 16 week (mouse)10113700000121800000Mouse
26884433Zlq2_mzygomatic length QTL 2, 5 week (mouse)10113700000125900000Mouse
4141242Psrs2_mpsoriasis susceptibility 2 (mouse)Not determined10114381196118661448Mouse
26884383Bzwq3_mbi-zygomatic width QTL 3, 5 week (mouse)10114400000122900000Mouse
13506931Recrq11_mrecombination rate in male meiosis QTL 11 (mouse)10114500000123800000Mouse
26884377Skwq3_mskull length QTL 3, 5 week (mouse)10114800000122900000Mouse
1300796Lmr5_mleishmaniasis resistance 5 (mouse)Not determined10116384730122343923Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:976
Count of miRNA genes:184
Interacting mature miRNAs:208
Transcripts:ENSMUST00000020437, ENSMUST00000163238, ENSMUST00000164077, ENSMUST00000169817
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001162904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001162905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_148922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030244936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036155660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC158804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC137608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP768394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU490427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU490428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M20823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M20824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000020437   ⟹   ENSMUSP00000020437
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,141,832 - 118,168,997 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163238   ⟹   ENSMUSP00000127919
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,141,859 - 118,168,381 (+)Ensembl
RefSeq Acc Id: ENSMUST00000164077   ⟹   ENSMUSP00000132966
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,141,924 - 118,168,997 (+)Ensembl
RefSeq Acc Id: ENSMUST00000169817   ⟹   ENSMUSP00000126258
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,141,945 - 118,168,163 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217767
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,157,012 - 118,158,468 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218011
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,141,924 - 118,148,139 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218400
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,151,995 - 118,159,549 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219087   ⟹   ENSMUSP00000151424
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,141,914 - 118,147,748 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219605
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,146,665 - 118,152,267 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219827
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl10118,141,811 - 118,146,760 (+)Ensembl
RefSeq Acc Id: NM_001162904   ⟹   NP_001156376
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,692 - 118,004,904 (+)NCBI
GRCm3810118,141,787 - 118,168,999 (+)NCBI
MGSCv3710117,578,843 - 117,606,055 (+)RGD
Celera10120,092,487 - 120,120,063 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001162905   ⟹   NP_001156377
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,692 - 118,004,904 (+)NCBI
GRCm3810118,141,787 - 118,168,999 (+)NCBI
MGSCv3710117,578,843 - 117,606,055 (+)RGD
Celera10120,092,487 - 120,120,063 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_010785   ⟹   NP_034915
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,692 - 118,004,904 (+)NCBI
GRCm3810118,141,787 - 118,168,999 (+)NCBI
MGSCv3710117,578,843 - 117,606,055 (+)RGD
Celera10120,092,487 - 120,120,063 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_148922   ⟹   NP_683724
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,692 - 118,004,904 (+)NCBI
GRCm3810118,141,787 - 118,168,999 (+)NCBI
MGSCv3710117,578,843 - 117,606,055 (+)RGD
Celera10120,092,487 - 120,120,063 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006513305   ⟹   XP_006513368
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,446 - 118,004,904 (+)NCBI
GRCm3810118,141,540 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006513306   ⟹   XP_006513369
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,697 - 118,004,904 (+)NCBI
GRCm3810118,141,792 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006513307   ⟹   XP_006513370
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,697 - 118,004,904 (+)NCBI
GRCm3810118,141,792 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006513308   ⟹   XP_006513371
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,697 - 118,004,904 (+)NCBI
GRCm3810118,141,792 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006513309   ⟹   XP_006513372
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,706 - 118,004,904 (+)NCBI
GRCm3810118,141,802 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030244929   ⟹   XP_030100789
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,697 - 118,004,904 (+)NCBI
GRCm3810118,141,792 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030244930   ⟹   XP_030100790
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,697 - 118,004,904 (+)NCBI
GRCm3810118,141,792 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030244931   ⟹   XP_030100791
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,697 - 118,004,904 (+)NCBI
GRCm3810118,141,792 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030244932   ⟹   XP_030100792
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,706 - 118,004,904 (+)NCBI
GRCm3810118,141,802 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030244933   ⟹   XP_030100793
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,706 - 118,004,904 (+)NCBI
GRCm3810118,141,802 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030244934   ⟹   XP_030100794
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,707 - 118,004,904 (+)NCBI
GRCm3810118,141,802 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030244936   ⟹   XP_030100796
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,707 - 118,004,904 (+)NCBI
GRCm3810118,141,802 - 118,168,999 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036155656   ⟹   XP_036011549
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,697 - 118,004,904 (+)NCBI
RefSeq Acc Id: XM_036155657   ⟹   XP_036011550
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,697 - 118,004,904 (+)NCBI
RefSeq Acc Id: XM_036155659   ⟹   XP_036011552
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,706 - 118,004,904 (+)NCBI
RefSeq Acc Id: XM_036155660   ⟹   XP_036011553
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910117,977,707 - 118,004,904 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001156376 (Get FASTA)   NCBI Sequence Viewer  
  NP_001156377 (Get FASTA)   NCBI Sequence Viewer  
  NP_034915 (Get FASTA)   NCBI Sequence Viewer  
  NP_683724 (Get FASTA)   NCBI Sequence Viewer  
  XP_006513368 (Get FASTA)   NCBI Sequence Viewer  
  XP_006513369 (Get FASTA)   NCBI Sequence Viewer  
  XP_006513370 (Get FASTA)   NCBI Sequence Viewer  
  XP_006513371 (Get FASTA)   NCBI Sequence Viewer  
  XP_006513372 (Get FASTA)   NCBI Sequence Viewer  
  XP_030100789 (Get FASTA)   NCBI Sequence Viewer  
  XP_030100790 (Get FASTA)   NCBI Sequence Viewer  
  XP_030100791 (Get FASTA)   NCBI Sequence Viewer  
  XP_030100792 (Get FASTA)   NCBI Sequence Viewer  
  XP_030100793 (Get FASTA)   NCBI Sequence Viewer  
  XP_030100794 (Get FASTA)   NCBI Sequence Viewer  
  XP_030100796 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011549 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011550 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011552 (Get FASTA)   NCBI Sequence Viewer  
  XP_036011553 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA39511 (Get FASTA)   NCBI Sequence Viewer  
  AAA39512 (Get FASTA)   NCBI Sequence Viewer  
  AAI37609 (Get FASTA)   NCBI Sequence Viewer  
  AAI44778 (Get FASTA)   NCBI Sequence Viewer  
  ACD03209 (Get FASTA)   NCBI Sequence Viewer  
  ACD03210 (Get FASTA)   NCBI Sequence Viewer  
  BAB23566 (Get FASTA)   NCBI Sequence Viewer  
  BAB27830 (Get FASTA)   NCBI Sequence Viewer  
  EDL21853 (Get FASTA)   NCBI Sequence Viewer  
  EDL21854 (Get FASTA)   NCBI Sequence Viewer  
  EDL21855 (Get FASTA)   NCBI Sequence Viewer  
  Q9D067 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_683724   ⟸   NM_148922
- Peptide Label: isoform 2
- UniProtKB: Q9D067 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_034915   ⟸   NM_010785
- Peptide Label: isoform 1
- UniProtKB: Q9D067 (UniProtKB/Swiss-Prot),   E9PW14 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001156376   ⟸   NM_001162904
- Peptide Label: isoform 3
- UniProtKB: Q9D067 (UniProtKB/Swiss-Prot),   B2RPU6 (UniProtKB/TrEMBL),   B7SNM8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001156377   ⟸   NM_001162905
- Peptide Label: isoform 4
- UniProtKB: Q9D067 (UniProtKB/Swiss-Prot),   B7SNM8 (UniProtKB/TrEMBL),   E9Q0B1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006513368   ⟸   XM_006513305
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006513370   ⟸   XM_006513307
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006513369   ⟸   XM_006513306
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006513371   ⟸   XM_006513308
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006513372   ⟸   XM_006513309
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_030100789   ⟸   XM_030244929
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030100790   ⟸   XM_030244930
- Peptide Label: isoform X5
RefSeq Acc Id: XP_030100791   ⟸   XM_030244931
- Peptide Label: isoform X9
RefSeq Acc Id: XP_030100792   ⟸   XM_030244932
- Peptide Label: isoform X10
RefSeq Acc Id: XP_030100794   ⟸   XM_030244934
- Peptide Label: isoform X11
RefSeq Acc Id: XP_030100793   ⟸   XM_030244933
- Peptide Label: isoform X10
RefSeq Acc Id: XP_030100796   ⟸   XM_030244936
- Peptide Label: isoform X11
RefSeq Acc Id: ENSMUSP00000132966   ⟸   ENSMUST00000164077
RefSeq Acc Id: ENSMUSP00000127919   ⟸   ENSMUST00000163238
RefSeq Acc Id: ENSMUSP00000020437   ⟸   ENSMUST00000020437
RefSeq Acc Id: ENSMUSP00000151424   ⟸   ENSMUST00000219087
RefSeq Acc Id: ENSMUSP00000126258   ⟸   ENSMUST00000169817
RefSeq Acc Id: XP_036011549   ⟸   XM_036155656
- Peptide Label: isoform X7
RefSeq Acc Id: XP_036011550   ⟸   XM_036155657
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036011552   ⟸   XM_036155659
- Peptide Label: isoform X10
RefSeq Acc Id: XP_036011553   ⟸   XM_036155660
- Peptide Label: isoform X11

Promoters
RGD ID:6819577
Promoter ID:MM_KWN:5711
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001162904,   NM_001162905,   NM_010785,   NM_148922,   UC007HDS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610117,578,504 - 117,579,004 (+)MPROMDB
RGD ID:8673342
Promoter ID:EPDNEW_M14702
Type:initiation region
Name:Mdm1_1
Description:Mus musculus transformed mouse 3T3 cell double minute 1 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810118,141,833 - 118,141,893EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96951 AgrOrtholog
Ensembl Genes ENSMUSG00000020212 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000020437 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000126258 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000127919 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000132966 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000151424 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020437 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000163238 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000164077 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000169817 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000219087 UniProtKB/TrEMBL
InterPro MDM1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:17245 UniProtKB/Swiss-Prot
MGD MGI:96951 ENTREZGENE
NCBI Gene 17245 ENTREZGENE
PANTHER PTHR32078 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MDM1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mdm1 PhenoGen
UniGene Mm.101191 ENTREZGENE
  Mm.442618 ENTREZGENE
UniProt A0A1W2P6V6_MOUSE UniProtKB/TrEMBL
  B2RPU6 ENTREZGENE, UniProtKB/TrEMBL
  B7SNM8 ENTREZGENE, UniProtKB/TrEMBL
  B7SNM9_MOUSE UniProtKB/TrEMBL
  B7ZMS8_MOUSE UniProtKB/TrEMBL
  E9PW14 ENTREZGENE, UniProtKB/TrEMBL
  E9Q0B1 ENTREZGENE, UniProtKB/TrEMBL
  MDM1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q61841 UniProtKB/Swiss-Prot
  Q61842 UniProtKB/Swiss-Prot
  Q9DBR6 UniProtKB/Swiss-Prot