ONTOLOGY REPORT - ANNOTATIONS
Term: stem cell differentiation
Accession: GO:0048863
browse the term
Definition: The process in which a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
Synonyms: xref_analog: Wikipedia:Stem_cell_differentiation
stem cell differentiation
G
A2m
alpha-2-macroglobulin
ISO
4
158,103,711
158,153,423
RGD:1624291
RGD
G
Ell3
elongation factor RNA polymerase II-like 3
ISS
3
108,241,165
108,245,260
RGD:1600115
UniProtKB
G
Etv4
ets variant 4
ISO
10
90,808,439
90,824,019
RGD:1624291
RGD
G
Etv4
ets variant 4
IEA
10
90,808,439
90,824,019
RGD:1600115
ENSEMBL
G
Foxo4
forkhead box O4
IEA
X
89,332,278
89,338,835
RGD:1600115
ENSEMBL
G
Foxo4
forkhead box O4
ISO
X
89,332,278
89,338,835
RGD:1624291
RGD
G
Gpm6a
glycoprotein m6a
ISO
16
39,670,748
39,783,384
RGD:1624291
RGD
G
Gpm6a
glycoprotein m6a
ISS
16
39,670,748
39,783,384
RGD:1600115
UniProtKB
G
Hmga2
high mobility group AT-hook 2
ISO
7
59,638,555
59,753,791
RGD:1624291
RGD
G
Hoxa7
homeobox A7
ISO
4
80,515,622
80,517,521
RGD:1624291
RGD
G
Hoxd4
homeo box D4
ISO
3
57,326,880
57,343,942
RGD:1624291
RGD
G
Hoxd4
homeo box D4
IEA
3
57,326,880
57,343,942
RGD:1600115
ENSEMBL
G
Kit
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
ISO
14
34,906,043
34,984,819
RGD:1624291
RGD
G
Lif
leukemia inhibitory factor
ISO
14
84,887,856
84,890,630
RGD:1624291
RGD
G
Lin28a
lin-28 homolog A (C. elegans)
ISO
5
152,730,997
152,766,317
RGD:1624291
RGD
G
Lin28a
lin-28 homolog A (C. elegans)
ISO
5
152,730,997
152,766,317
RGD:1624291
RGD
G
Msx1
msh homeobox 1
ISO
14
78,257,345
78,261,144
RGD:1624291
RGD
G
Msx1
msh homeobox 1
IEA
14
78,257,345
78,261,144
RGD:1600115
ENSEMBL
G
Msx2
msh homeobox 2
ISO
17
17,243,262
17,248,927
RGD:1624291
RGD
G
Msx2
msh homeobox 2
IEA
17
17,243,262
17,248,927
RGD:1600115
ENSEMBL
G
Nanog
Nanog homeobox
ISO
4
159,190,786
159,198,160
RGD:1624291
RGD
G
Nanog
Nanog homeobox
ISO
4
159,190,786
159,198,160
RGD:1624291
RGD
G
Osr1
odd-skipped related 1 (Drosophila)
ISO
6
33,074,410
33,076,769
RGD:1624291
RGD
G
Osr1
odd-skipped related 1 (Drosophila)
ISS
6
33,074,410
33,076,769
RGD:1600115
UniProtKB
G
Pax2
paired box 2
ISO
1
249,804,055
249,895,306
RGD:1624291
RGD
G
Pax2
paired box 2
ISS
1
249,804,055
249,895,306
RGD:1600115
UniProtKB
G
Pdx1
pancreatic and duodenal homeobox 1
IEP
RGD:2311162
RGD
G
Pdx1
pancreatic and duodenal homeobox 1
IMP
RGD:2311168
RGD
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Psmd11
proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
IEA
10
68,664,950
68,710,616
RGD:1600115
ENSEMBL
G
Psmd11
proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
ISS
10
68,664,950
68,710,616
RGD:1600115
UniProtKB
G
Psmd11
proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
ISO
10
68,664,950
68,710,616
RGD:1624291
RGD
G
Runx2
runt-related transcription factor 2
ISO
9
11,869,234
12,025,219
RGD:1624291
RGD
G
Sox10
SRY (sex determining region Y)-box 10
IEP
7
117,138,694
117,149,939
RGD:1600051
RGD
G
Sox17
SRY (sex determining region Y)-box 17
ISO
5
15,241,405
15,246,904
RGD:1624291
RGD
G
Sox2
SRY (sex determining region Y)-box 2
ISO
2
120,969,021
120,971,430
RGD:1624291
RGD
G
Tcf7l1
transcription factor 7-like 1 (T-cell specific, HMG-box)
ISO
RGD:1624291
RGD
G
Zfp281
zinc finger protein 281
IEA
13
49,700,599
49,704,316
RGD:1600115
ENSEMBL
canonical Wnt receptor signaling pathway involved in mesenchymal stem cell differentiation
G
Fzd1
frizzled family receptor 1
IEA
4
25,994,423
25,998,821
RGD:1600115
ENSEMBL
G
Fzd1
frizzled family receptor 1
ISO
4
25,994,423
25,998,821
RGD:1624291
RGD
G
Wnt3
wingless-type MMTV integration site family, member 3
ISO
10
92,925,605
92,969,613
RGD:1624291
RGD
G
Wnt3
wingless-type MMTV integration site family, member 3
IEA
10
92,925,605
92,969,613
RGD:1600115
ENSEMBL
germ-line stem cell maintenance
G
Crebbp
CREB binding protein
ISO
10
11,598,680
11,724,122
RGD:1624291
RGD
G
Crebbp
CREB binding protein
IEA
10
11,598,680
11,724,122
RGD:1600115
ENSEMBL
G
Nanos2
nanos homolog 2 (Drosophila)
ISO
1
78,341,105
78,342,565
RGD:1624291
RGD
G
Nanos2
nanos homolog 2 (Drosophila)
ISO
1
78,341,105
78,342,565
RGD:1624291
RGD
G
Nanos2
nanos homolog 2 (Drosophila)
IEA
1
78,341,105
78,342,565
RGD:1600115
ENSEMBL
G
Piwil2
piwi-like RNA-mediated gene silencing 2
ISO
15
50,757,820
50,823,943
RGD:1624291
RGD
G
Piwil2
piwi-like RNA-mediated gene silencing 2
IEA
15
50,757,820
50,823,943
RGD:1600115
ENSEMBL
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Pou5f1
POU class 5 homeobox 1
IEA
RGD:1600115
ENSEMBL
G
Tfap2c
transcription factor AP-2 gamma
ISO
3
163,459,283
163,467,166
RGD:1624291
RGD
G
Tfap2c
transcription factor AP-2 gamma
IEA
3
163,459,283
163,467,166
RGD:1600115
ENSEMBL
hematopoietic stem cell differentiation
G
Batf
basic leucine zipper transcription factor, ATF-like
ISS
6
109,793,076
109,817,614
RGD:1600115
UniProtKB
G
Batf
basic leucine zipper transcription factor, ATF-like
ISO
6
109,793,076
109,817,614
RGD:1624291
RGD
G
Cdk6
cyclin-dependent kinase 6
ISO
4
27,362,656
27,618,006
RGD:1624291
RGD
G
Chd2
chromodomain helicase DNA binding protein 2
ISO
1
128,609,727
128,720,325
RGD:1624291
RGD
G
Ercc2
excision repair cross-complementing rodent repair deficiency, complementation group 2
ISO
RGD:1624291
RGD
G
Ercc2
excision repair cross-complementing rodent repair deficiency, complementation group 2
IEA
RGD:1600115
ENSEMBL
G
Hoxb4
homeo box B4
IEA
10
85,050,695
85,053,277
RGD:1600115
ENSEMBL
G
Hoxb4
homeo box B4
ISO
10
85,050,695
85,053,277
RGD:1624291
RGD
G
Sfrp1
secreted frizzled-related protein 1
IEA
16
73,030,458
73,067,304
RGD:1600115
ENSEMBL
G
Sfrp1
secreted frizzled-related protein 1
ISO
16
73,030,458
73,067,304
RGD:1624291
RGD
G
Sp7
Sp7 transcription factor
ISO
7
141,109,771
141,118,397
RGD:1624291
RGD
G
Sp7
Sp7 transcription factor
IEA
7
141,109,771
141,118,397
RGD:1600115
ENSEMBL
G
Srf
serum response factor (c-fos serum response element-binding transcription factor)
ISO
9
9,788,378
9,797,639
RGD:1624291
RGD
G
Tal1
T-cell acute lymphocytic leukemia 1
IEA
5
135,430,985
135,444,692
RGD:1600115
ENSEMBL
G
Terc
telomerase RNA component
ISO
2
117,234,446
117,234,833
RGD:1624291
RGD
G
Xrcc5
X-ray repair complementing defective repair in Chinese hamster cells 5
IEA
9
71,472,459
71,581,936
RGD:1600115
ENSEMBL
G
Xrcc5
X-ray repair complementing defective repair in Chinese hamster cells 5
ISO
9
71,472,459
71,581,936
RGD:1624291
RGD
hepatoblast differentiation
G
Hhex
hematopoietically expressed homeobox
ISO
1
241,736,542
241,742,129
RGD:1624291
RGD
G
Hhex
hematopoietically expressed homeobox
IEA
1
241,736,542
241,742,129
RGD:1600115
ENSEMBL
G
Hnf1b
HNF1 homeobox B
ISO
10
72,081,091
72,187,014
RGD:1624291
RGD
negative regulation of amniotic stem cell differentiation
G
Rest
RE1-silencing transcription factor
ISO
14
33,136,046
33,151,142
RGD:1624291
RGD
G
Rest
RE1-silencing transcription factor
ISS
14
33,136,046
33,151,142
RGD:1600115
UniProtKB
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis
G
Pax2
paired box 2
ISO
1
249,804,055
249,895,306
RGD:1624291
RGD
G
Pax2
paired box 2
ISS
1
249,804,055
249,895,306
RGD:1600115
UniProtKB
G
Pax8
paired box 8
ISO
3
2,671,478
2,726,801
RGD:1624291
RGD
G
Pax8
paired box 8
ISS
3
2,671,478
2,726,801
RGD:1600115
UniProtKB
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis
G
Bmp7
bone morphogenetic protein 7
ISO
3
163,723,429
163,799,567
RGD:1624291
RGD
G
Bmp7
bone morphogenetic protein 7
IEA
3
163,723,429
163,799,567
RGD:1600115
ENSEMBL
negative regulation of mesenchymal stem cell differentiation
G
Rest
RE1-silencing transcription factor
ISO
14
33,136,046
33,151,142
RGD:1624291
RGD
negative regulation of stem cell differentiation
G
Hes1
hairy and enhancer of split 1 (Drosophila)
ISO
11
72,603,482
72,605,673
RGD:1624291
RGD
G
Hes5
hairy and enhancer of split 5 (Drosophila)
ISO
5
171,763,869
171,764,636
RGD:1624291
RGD
G
Hes5
hairy and enhancer of split 5 (Drosophila)
ISS
5
171,763,869
171,764,636
RGD:1600115
UniProtKB
G
Jag1
jagged 1
ISO
3
125,181,063
125,216,481
RGD:1624291
RGD
G
Jag1
jagged 1
IEA
3
125,181,063
125,216,481
RGD:1600115
ENSEMBL
G
Notch1
notch 1
ISO
3
4,631,797
4,677,640
RGD:1624291
RGD
G
Notch1
notch 1
IEA
3
4,631,797
4,677,640
RGD:1600115
ENSEMBL
neuronal stem cell maintenance
G
Dll1
delta-like 1 (Drosophila)
ISO
1
54,240,395
54,248,183
RGD:1624291
RGD
G
Dll1
delta-like 1 (Drosophila)
IEA
1
54,240,395
54,248,183
RGD:1600115
ENSEMBL
G
Hes1
hairy and enhancer of split 1 (Drosophila)
ISO
11
72,603,482
72,605,673
RGD:1624291
RGD
G
Hes1
hairy and enhancer of split 1 (Drosophila)
ISO
11
72,603,482
72,605,673
RGD:1624291
RGD
G
Hes1
hairy and enhancer of split 1 (Drosophila)
IDA
11
72,603,482
72,605,673
UniProtKB
G
Hes5
hairy and enhancer of split 5 (Drosophila)
ISO
5
171,763,869
171,764,636
RGD:1624291
RGD
G
Hes5
hairy and enhancer of split 5 (Drosophila)
ISO
5
171,763,869
171,764,636
RGD:1624291
RGD
G
Hes5
hairy and enhancer of split 5 (Drosophila)
IDA
5
171,763,869
171,764,636
UniProtKB
G
Hook3
hook homolog 3 (Drosophila)
ISO
16
70,338,144
70,424,173
RGD:1624291
RGD
G
Hook3
hook homolog 3 (Drosophila)
IEA
16
70,338,144
70,424,173
RGD:1600115
ENSEMBL
G
Jag1
jagged 1
ISO
3
125,181,063
125,216,481
RGD:1624291
RGD
G
Jag1
jagged 1
IEA
3
125,181,063
125,216,481
RGD:1600115
ENSEMBL
G
Mcph1
microcephalin 1
ISO
16
75,839,877
76,026,968
RGD:1624291
RGD
G
Notch1
notch 1
ISO
3
4,631,797
4,677,640
RGD:1624291
RGD
G
Notch1
notch 1
IEA
3
4,631,797
4,677,640
RGD:1600115
ENSEMBL
G
Pcm1
pericentriolar material 1
ISO
16
54,321,572
54,419,178
RGD:1624291
RGD
G
Pcm1
pericentriolar material 1
IEA
16
54,321,572
54,419,178
RGD:1600115
ENSEMBL
G
Prox1
prospero homeobox 1
ISO
13
106,421,541
106,471,350
RGD:1624291
RGD
G
Prox1
prospero homeobox 1
IEA
13
106,421,541
106,471,350
RGD:1600115
ENSEMBL
G
Sct
secretin
ISO
1
201,472,250
201,472,944
RGD:1624291
RGD
G
Sox2
SRY (sex determining region Y)-box 2
ISO
2
120,969,021
120,971,430
RGD:1624291
RGD
positive regulation of mesenchymal stem cell differentiation
G
Sox6
SRY (sex determining region Y)-box 6
ISO
1
173,556,966
174,069,437
RGD:1624291
RGD
G
Sox6
SRY (sex determining region Y)-box 6
IEA
1
173,556,966
174,069,437
RGD:1600115
ENSEMBL
G
Sox9
SRY (sex determining region Y)-box 9
ISO
10
102,392,187
102,394,256
RGD:2290270
MGI
G
Sox9
SRY (sex determining region Y)-box 9
ISS
10
102,392,187
102,394,256
RGD:1600115
UniProtKB
G
Sox9
SRY (sex determining region Y)-box 9
ISO
10
102,392,187
102,394,256
RGD:1624291
RGD
positive regulation of stem cell differentiation
G
Gsk3b
glycogen synthase kinase 3 beta
ISO
11
64,284,731
64,428,698
RGD:1624291
RGD
G
Gsk3b
glycogen synthase kinase 3 beta
IEA
11
64,284,731
64,428,698
RGD:1600115
ENSEMBL
G
Hoxb4
homeo box B4
IEA
10
85,050,695
85,053,277
RGD:1600115
ENSEMBL
G
Hoxb4
homeo box B4
ISO
10
85,050,695
85,053,277
RGD:1624291
RGD
G
Sp7
Sp7 transcription factor
ISO
7
141,109,771
141,118,397
RGD:1624291
RGD
G
Sp7
Sp7 transcription factor
IEA
7
141,109,771
141,118,397
RGD:1600115
ENSEMBL
G
Tacstd2
tumor-associated calcium signal transducer 2
ISO
4
97,803,151
97,804,851
RGD:1624291
RGD
regulation of hematopoietic stem cell differentiation
G
Eif2ak2
eukaryotic translation initiation factor 2-alpha kinase 2
ISS
RGD:1600115
UniProtKB
regulation of mesenchymal stem cell differentiation
G
Pdgfra
platelet derived growth factor receptor, alpha polypeptide
ISO
14
35,369,422
35,418,126
RGD:1624291
RGD
G
Pdgfra
platelet derived growth factor receptor, alpha polypeptide
IEA
14
35,369,422
35,418,126
RGD:1600115
ENSEMBL
G
Pdgfra
platelet derived growth factor receptor, alpha polypeptide
ISS
14
35,369,422
35,418,126
RGD:1600115
UniProtKB
regulation of stem cell maintenance
G
Cnot1
CCR4-NOT transcription complex, subunit 1
ISO
19
9,712,024
9,803,182
RGD:1624291
RGD
G
Cnot2
CCR4-NOT transcription complex, subunit 2
ISO
7
55,823,982
55,880,812
RGD:1624291
RGD
G
Hmga2
high mobility group AT-hook 2
ISO
7
59,638,555
59,753,791
RGD:1624291
RGD
G
Hmga2
high mobility group AT-hook 2
ISS
7
59,638,555
59,753,791
RGD:1600115
UniProtKB
G
Sav1
salvador homolog 1 (Drosophila)
ISO
6
92,081,608
92,101,975
RGD:1624291
RGD
G
Sav1
salvador homolog 1 (Drosophila)
IEA
6
92,081,608
92,101,975
RGD:1600115
ENSEMBL
G
Smo
smoothened, frizzled family receptor
ISO
4
56,623,494
56,645,571
RGD:1624291
RGD
G
Smo
smoothened, frizzled family receptor
IEA
4
56,623,494
56,645,571
RGD:1600115
ENSEMBL
G
Tal1
T-cell acute lymphocytic leukemia 1
IEA
5
135,430,985
135,444,692
RGD:1600115
ENSEMBL
G
Tcf7l1
transcription factor 7-like 1 (T-cell specific, HMG-box)
ISO
RGD:1624291
RGD
G
Tcf7l1
transcription factor 7-like 1 (T-cell specific, HMG-box)
ISO
RGD:1624291
RGD
G
Tcf7l1
transcription factor 7-like 1 (T-cell specific, HMG-box)
IEA
RGD:1600115
ENSEMBL
satellite cell commitment
G
Pax7
paired box 7
ISO
5
158,547,765
158,648,053
RGD:1624291
RGD
G
Pax7
paired box 7
IEA
5
158,547,765
158,648,053
RGD:1600115
ENSEMBL
satellite cell differentiation
G
Cdon
cell adhesion associated, oncogene regulated
ISO
8
35,238,899
35,291,743
RGD:1624291
RGD
G
Cdon
cell adhesion associated, oncogene regulated
IEA
8
35,238,899
35,291,743
RGD:1600115
ENSEMBL
G
Megf10
multiple EGF-like domains 10
ISO
18
52,948,935
53,051,823
RGD:1624291
RGD
G
Megf10
multiple EGF-like domains 10
ISO
18
52,948,935
53,051,823
RGD:1624291
RGD
G
Megf10
multiple EGF-like domains 10
IEA
18
52,948,935
53,051,823
RGD:1600115
ENSEMBL
G
Megf10
multiple EGF-like domains 10
IEA
18
52,948,935
53,051,823
RGD:1600115
ENSEMBL
G
Mylk2
myosin light chain kinase 2
ISO
3
143,252,183
143,263,849
RGD:1624291
RGD
G
Mylk2
myosin light chain kinase 2
IEA
3
143,252,183
143,263,849
RGD:1600115
ENSEMBL
G
Sepn1
selenoprotein N, 1
ISO
5
153,295,598
153,308,305
RGD:1624291
RGD
satellite cell maintenance involved in skeletal muscle regeneration
G
Cdk15
cyclin-dependent kinase 15
ISO
9
57,840,625
57,930,096
RGD:1624291
RGD
G
Fzd7
frizzled family receptor 7
ISO
9
58,063,740
58,066,559
RGD:1624291
RGD
G
Fzd7
frizzled family receptor 7
IEA
9
58,063,740
58,066,559
RGD:1600115
ENSEMBL
G
Igf1
insulin-like growth factor 1
ISO
7
24,531,669
24,605,742
RGD:1624291
RGD
G
Igf1
insulin-like growth factor 1
IEA
7
24,531,669
24,605,742
RGD:1600115
ENSEMBL
G
Wnt7a
wingless-type MMTV integration site family, member 7A
ISO
4
125,541,281
125,586,167
RGD:1624291
RGD
somatic stem cell maintenance
G
Apc
adenomatous polyposis coli
ISO
18
26,732,147
26,790,383
RGD:1624291
RGD
G
Apc
adenomatous polyposis coli
IEA
18
26,732,147
26,790,383
RGD:1600115
ENSEMBL
G
Ascl2
achaete-scute complex homolog 2 (Drosophila)
ISO
1
203,242,130
203,244,480
RGD:1624291
RGD
G
Ascl2
achaete-scute complex homolog 2 (Drosophila)
IEA
1
203,242,130
203,244,480
RGD:1600115
ENSEMBL
G
Bcl9
B-cell CLL/lymphoma 9
ISO
2
191,991,187
191,998,287
RGD:1624291
RGD
G
Bcl9
B-cell CLL/lymphoma 9
IEA
2
191,991,187
191,998,287
RGD:1600115
ENSEMBL
G
Bcl9l
B-cell CLL/lymphoma 9-like
ISO
8
47,453,556
47,482,323
RGD:1624291
RGD
G
Bcl9l
B-cell CLL/lymphoma 9-like
IEA
8
47,453,556
47,482,323
RGD:1600115
ENSEMBL
G
Cdkn2a
cyclin-dependent kinase inhibitor 2A
ISO
5
108,908,749
108,916,380
RGD:1624291
RGD
G
Cdx2
caudal type homeo box 2
ISO
12
8,296,103
8,303,643
RGD:1624291
RGD
G
Cdx2
caudal type homeo box 2
ISO
12
8,296,103
8,303,643
RGD:1624291
RGD
G
Cdx2
caudal type homeo box 2
IEA
12
8,296,103
8,303,643
RGD:1600115
ENSEMBL
G
Fgf10
fibroblast growth factor 10
ISO
2
50,866,799
50,940,319
RGD:1624291
RGD
G
Fgf10
fibroblast growth factor 10
IEA
2
50,866,799
50,940,319
RGD:1600115
ENSEMBL
G
Fgfr3
fibroblast growth factor receptor 3
ISO
14
82,683,191
82,697,229
RGD:1624291
RGD
G
Fgfr3
fibroblast growth factor receptor 3
IEA
14
82,683,191
82,697,229
RGD:1600115
ENSEMBL
G
Gata2
GATA binding protein 2
ISO
4
122,279,753
122,288,528
RGD:1624291
RGD
G
Gata2
GATA binding protein 2
IEA
4
122,279,753
122,288,528
RGD:1600115
ENSEMBL
G
Hes1
hairy and enhancer of split 1 (Drosophila)
ISO
11
72,603,482
72,605,673
RGD:1624291
RGD
G
Hmga2
high mobility group AT-hook 2
ISO
7
59,638,555
59,753,791
RGD:1624291
RGD
G
Hmga2
high mobility group AT-hook 2
IEA
7
59,638,555
59,753,791
RGD:1600115
ENSEMBL
G
Kat6a
K(lysine) acetyltransferase 6A
ISO
16
73,553,868
73,634,794
RGD:1624291
RGD
G
Kat6a
K(lysine) acetyltransferase 6A
ISO
16
73,553,868
73,634,794
RGD:1624291
RGD
G
Kat6a
K(lysine) acetyltransferase 6A
IEA
16
73,553,868
73,634,794
RGD:1600115
ENSEMBL
G
Kit
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
IMP
14
34,906,043
34,984,819
RGD:2292509
RGD
G
Klf10
Kruppel-like factor 10
ISO
7
73,821,190
73,826,866
RGD:1624291
RGD
G
Klf10
Kruppel-like factor 10
IEA
7
73,821,190
73,826,866
RGD:1600115
ENSEMBL
G
Ldb1
LIM domain binding 1
ISO
1
251,253,305
251,260,850
RGD:1624291
RGD
G
Ldb1
LIM domain binding 1
IEA
1
251,253,305
251,260,850
RGD:1600115
ENSEMBL
G
Ldb2
LIM domain binding 2
ISO
14
71,374,621
71,695,965
RGD:1624291
RGD
G
Ldb2
LIM domain binding 2
IEA
14
71,374,621
71,695,965
RGD:1600115
ENSEMBL
G
Lig4
ligase IV, DNA, ATP-dependent
ISO
16
84,881,880
84,888,448
RGD:1624291
RGD
G
Lig4
ligase IV, DNA, ATP-dependent
IEA
16
84,881,880
84,888,448
RGD:1600115
ENSEMBL
G
Lrp5
low density lipoprotein receptor-related protein 5
ISO
1
206,102,750
206,206,350
RGD:1624291
RGD
G
Lrp5
low density lipoprotein receptor-related protein 5
IEA
1
206,102,750
206,206,350
RGD:1600115
ENSEMBL
G
Nanog
Nanog homeobox
ISO
4
159,190,786
159,198,160
RGD:1624291
RGD
G
Nog
noggin
ISO
10
77,689,244
77,690,871
RGD:1624291
RGD
G
Nog
noggin
IEA
10
77,689,244
77,690,871
RGD:1600115
ENSEMBL
G
Pla2g2a
phospholipase A2, group IIA (platelets, synovial fluid)
ISO
5
157,654,786
157,657,360
RGD:1624291
RGD
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
ISO
RGD:1624291
RGD
G
Sfrp1
secreted frizzled-related protein 1
ISO
16
73,030,458
73,067,304
RGD:1624291
RGD
G
Sfrp1
secreted frizzled-related protein 1
IEA
16
73,030,458
73,067,304
RGD:1600115
ENSEMBL
G
Sox2
SRY (sex determining region Y)-box 2
ISO
2
120,969,021
120,971,430
RGD:1624291
RGD
G
Sox2
SRY (sex determining region Y)-box 2
ISO
2
120,969,021
120,971,430
RGD:1624291
RGD
G
Sox2
SRY (sex determining region Y)-box 2
ISO
2
120,969,021
120,971,430
RGD:1624291
RGD
G
Sox2
SRY (sex determining region Y)-box 2
IEA
2
120,969,021
120,971,430
RGD:1600115
ENSEMBL
G
Sox4
SRY (sex determining region Y)-box 4
ISO
17
42,172,863
42,177,590
RGD:1624291
RGD
G
Sox9
SRY (sex determining region Y)-box 9
IMP
10
102,392,187
102,394,256
RGD:2290270
MGI
G
Sox9
SRY (sex determining region Y)-box 9
ISS
10
102,392,187
102,394,256
RGD:1600115
UniProtKB
G
Sox9
SRY (sex determining region Y)-box 9
ISO
10
102,392,187
102,394,256
RGD:1624291
RGD
G
Spi1
spleen focus forming virus (SFFV) proviral integration oncogene spi1
IEA
3
75,456,353
75,475,722
RGD:1600115
ENSEMBL
G
Tcf7l1
transcription factor 7-like 1 (T-cell specific, HMG-box)
ISO
RGD:1624291
RGD
G
Tcf7l1
transcription factor 7-like 1 (T-cell specific, HMG-box)
IEA
RGD:1600115
ENSEMBL
G
Tcf7l2
transcription factor 7-like 2 (T-cell specific, HMG-box)
ISO
1
262,031,823
262,226,710
RGD:1624291
RGD
G
Tcf7l2
transcription factor 7-like 2 (T-cell specific, HMG-box)
ISO
1
262,031,823
262,226,710
RGD:1624291
RGD
G
Tcf7l2
transcription factor 7-like 2 (T-cell specific, HMG-box)
ISO
1
262,031,823
262,226,710
RGD:1624291
RGD
G
Tcf7l2
transcription factor 7-like 2 (T-cell specific, HMG-box)
ISO
1
262,031,823
262,226,710
RGD:1624291
RGD
G
Tfap2c
transcription factor AP-2 gamma
ISO
3
163,459,283
163,467,166
RGD:1624291
RGD
G
Tfap2c
transcription factor AP-2 gamma
IEA
3
163,459,283
163,467,166
RGD:1600115
ENSEMBL
G
Vangl2
VANGL planar cell polarity protein 2
ISO
13
87,964,426
87,988,364
RGD:1624291
RGD
G
Vangl2
VANGL planar cell polarity protein 2
IEA
13
87,964,426
87,988,364
RGD:1600115
ENSEMBL
G
Vps72
vacuolar protein sorting 72 homolog (S. cerevisiae)
ISO
2
190,012,846
190,024,407
RGD:1624291
RGD
G
Vps72
vacuolar protein sorting 72 homolog (S. cerevisiae)
IEA
2
190,012,846
190,024,407
RGD:1600115
ENSEMBL
G
Wnt7a
wingless-type MMTV integration site family, member 7A
ISO
4
125,541,281
125,586,167
RGD:1624291
RGD
G
Zhx2
zinc fingers and homeoboxes 2
ISO
7
94,528,435
94,530,945
RGD:1624291
RGD
G
Zhx2
zinc fingers and homeoboxes 2
IEA
7
94,528,435
94,530,945
RGD:1600115
ENSEMBL
stem cell development
G
Fgf2
fibroblast growth factor 2
ISO
2
123,893,314
123,947,136
RGD:1624291
RGD
G
Fgf2
fibroblast growth factor 2
IEA
2
123,893,314
123,947,136
RGD:1600115
ENSEMBL
G
Msi2
musashi RNA-binding protein 2
ISO
10
76,776,415
77,149,277
RGD:1624291
RGD
G
Msi2
musashi RNA-binding protein 2
IEA
10
76,776,415
77,149,277
RGD:1600115
ENSEMBL
G
Ptprc
protein tyrosine phosphatase, receptor type, C
ISO
13
51,246,163
51,357,995
RGD:1624291
RGD
G
Ptprc
protein tyrosine phosphatase, receptor type, C
IEA
13
51,246,163
51,357,995
RGD:1600115
ENSEMBL
G
Setd2
SET domain containing 2
ISO
8
114,913,851
114,999,955
RGD:1624291
RGD
G
Shh
sonic hedgehog
ISO
4
2,200,504
2,209,657
RGD:1624291
RGD
G
Shh
sonic hedgehog
IEA
4
2,200,504
2,209,657
RGD:1600115
ENSEMBL
G
Shh
sonic hedgehog
ISS
4
2,200,504
2,209,657
RGD:1600115
UniProtKB
G
Wnt7a
wingless-type MMTV integration site family, member 7A
ISO
4
125,541,281
125,586,167
RGD:1624291
RGD
G
Wnt7b
wingless-type MMTV integration site family, member 7B
ISO
7
123,533,713
123,554,333
RGD:1624291
RGD
stem cell fate specification
G
Sox17
SRY (sex determining region Y)-box 17
ISO
5
15,241,405
15,246,904
RGD:1624291
RGD
G
Sox17
SRY (sex determining region Y)-box 17
IEA
5
15,241,405
15,246,904
RGD:1600115
ENSEMBL
G
Sox18
SRY (sex determining region Y)-box 18
ISO
3
170,820,460
170,822,262
RGD:1624291
RGD
G
Sox18
SRY (sex determining region Y)-box 18
IEA
3
170,820,460
170,822,262
RGD:1600115
ENSEMBL
stem cell maintenance
G
Apc
adenomatous polyposis coli
ISO
18
26,732,147
26,790,383
RGD:1624291
RGD
G
Bmpr1a
bone morphogenetic protein receptor, type IA
ISO
16
10,061,943
10,105,854
RGD:1624291
RGD
G
Bmpr1a
bone morphogenetic protein receptor, type IA
IEA
16
10,061,943
10,105,854
RGD:1600115
ENSEMBL
G
Cdc73
cell division cycle 73
ISO
13
57,441,674
57,534,385
RGD:1624291
RGD
G
Cdc73
cell division cycle 73
IEA
13
57,441,674
57,534,385
RGD:1600115
ENSEMBL
G
Cdc73
cell division cycle 73
ISS
13
57,441,674
57,534,385
RGD:1600115
UniProtKB
G
Cdk15
cyclin-dependent kinase 15
ISO
9
57,840,625
57,930,096
RGD:1624291
RGD
G
Ctr9
Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
ISO
1
168,784,355
168,814,971
RGD:1624291
RGD
G
Ctr9
Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
ISO
1
168,784,355
168,814,971
RGD:1624291
RGD
G
Ctr9
Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
IEA
1
168,784,355
168,814,971
RGD:1600115
ENSEMBL
G
Ctr9
Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
IEA
1
168,784,355
168,814,971
RGD:1600115
ENSEMBL
G
Dicer1
dicer 1, ribonuclease type III
ISO
6
128,777,468
128,838,780
RGD:1624291
RGD
G
Dicer1
dicer 1, ribonuclease type III
IEA
6
128,777,468
128,838,780
RGD:1600115
ENSEMBL
G
Dppa2
developmental pluripotency associated 2
ISO
11
53,825,661
53,834,239
RGD:1624291
RGD
G
Eomes
eomesodermin
ISO
8
123,376,689
123,383,451
RGD:1624291
RGD
G
Esrrb
estrogen-related receptor beta
ISO
6
110,589,116
110,635,158
RGD:1624291
RGD
G
Esrrb
estrogen-related receptor beta
ISO
6
110,589,116
110,635,158
RGD:1624291
RGD
G
Esrrb
estrogen-related receptor beta
ISO
6
110,589,116
110,635,158
RGD:1624291
RGD
G
Esrrb
estrogen-related receptor beta
IEA
6
110,589,116
110,635,158
RGD:1600115
ENSEMBL
G
Fgf4
fibroblast growth factor 4
ISO
1
205,292,272
205,293,705
RGD:1624291
RGD
G
Fgfr1
Fibroblast growth factor receptor 1
IMP
16
70,869,974
70,910,045
RGD:2325177
RGD
G
Fzd7
frizzled family receptor 7
ISO
9
58,063,740
58,066,559
RGD:1624291
RGD
G
Klf4
Kruppel-like factor 4 (gut)
ISO
5
73,446,928
73,451,286
RGD:1624291
RGD
G
Klf4
Kruppel-like factor 4 (gut)
ISO
5
73,446,928
73,451,286
RGD:1624291
RGD
G
Klf4
Kruppel-like factor 4 (gut)
IEA
5
73,446,928
73,451,286
RGD:1600115
ENSEMBL
G
Leo1
Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
ISO
8
80,266,160
80,290,547
RGD:1624291
RGD
G
Leo1
Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
ISO
8
80,266,160
80,290,547
RGD:1624291
RGD
G
Leo1
Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
ISS
8
80,266,160
80,290,547
RGD:1600115
UniProtKB
G
Lif
leukemia inhibitory factor
ISO
14
84,887,856
84,890,630
RGD:1624291
RGD
G
Lif
leukemia inhibitory factor
IEA
14
84,887,856
84,890,630
RGD:1600115
ENSEMBL
G
Lin28a
lin-28 homolog A (C. elegans)
IEA
5
152,730,997
152,766,317
RGD:1600115
ENSEMBL
G
Lin28a
lin-28 homolog A (C. elegans)
ISO
5
152,730,997
152,766,317
RGD:1624291
RGD
G
LOC100911235
mediator of RNA polymerase II transcription subunit 7-like
IEA
RGD:1600115
ENSEMBL
G
Med10
mediator complex subunit 10
IEA
17
3,621,205
3,626,895
RGD:1600115
ENSEMBL
G
Med12
mediator complex subunit 12
ISO
X
89,351,546
89,374,489
RGD:1624291
RGD
G
Med12
mediator complex subunit 12
IEA
X
89,351,546
89,374,489
RGD:1600115
ENSEMBL
G
Med14
mediator complex subunit 14
ISO
X
22,116,986
22,205,877
RGD:1624291
RGD
G
Med14
mediator complex subunit 14
IEA
X
22,116,986
22,205,877
RGD:1600115
ENSEMBL
G
Med15
mediator complex subunit 15
ISO
11
85,270,503
85,344,999
RGD:1624291
RGD
G
Med15
mediator complex subunit 15
IEA
11
85,270,503
85,344,999
RGD:1600115
ENSEMBL
G
Med17
mediator complex subunit 17
ISO
8
12,062,713
12,081,709
RGD:1624291
RGD
G
Med17
mediator complex subunit 17
IEA
8
12,062,713
12,081,709
RGD:1600115
ENSEMBL
G
Med24
mediator complex subunit 24
ISO
10
87,477,371
87,502,682
RGD:1624291
RGD
G
Med24
mediator complex subunit 24
IEA
10
87,477,371
87,502,682
RGD:1600115
ENSEMBL
G
Med27
mediator complex subunit 27
ISO
3
8,309,117
8,483,255
RGD:1624291
RGD
G
Med27
mediator complex subunit 27
IEA
3
8,309,117
8,483,255
RGD:1600115
ENSEMBL
G
Med28
mediator complex subunit 28
ISO
14
70,666,489
70,675,285
RGD:1624291
RGD
G
Med28
mediator complex subunit 28
IEA
14
70,666,489
70,675,285
RGD:1600115
ENSEMBL
G
Med30
mediator complex subunit 30
ISO
7
88,997,614
89,019,354
RGD:1624291
RGD
G
Med30
mediator complex subunit 30
IEA
7
88,997,614
89,019,354
RGD:1600115
ENSEMBL
G
Med6
mediator complex subunit 6
ISO
6
105,432,911
105,446,531
RGD:1624291
RGD
G
Med6
mediator complex subunit 6
IEA
6
105,432,911
105,446,531
RGD:1600115
ENSEMBL
G
Nanog
Nanog homeobox
ISO
4
159,190,786
159,198,160
RGD:1624291
RGD
G
Nanog
Nanog homeobox
ISO
4
159,190,786
159,198,160
RGD:1624291
RGD
G
Nanog
Nanog homeobox
ISO
4
159,190,786
159,198,160
RGD:1624291
RGD
G
Nanog
Nanog homeobox
ISO
4
159,190,786
159,198,160
RGD:1624291
RGD
G
Nanog
Nanog homeobox
IEA
4
159,190,786
159,198,160
RGD:1600115
ENSEMBL
G
Nipbl
Nipped-B homolog (Drosophila)
ISO
2
57,908,828
58,099,422
RGD:1624291
RGD
G
Nkap
NFKB activating protein
ISO
X
7,762,215
7,781,862
RGD:1624291
RGD
G
Nkap
NFKB activating protein
IEA
X
7,762,215
7,781,862
RGD:1600115
ENSEMBL
G
Nodal
nodal growth differentiation factor
ISO
20
29,546,982
29,555,419
RGD:1624291
RGD
G
Nodal
nodal growth differentiation factor
ISO
20
29,546,982
29,555,419
RGD:1624291
RGD
G
Nodal
nodal growth differentiation factor
IEA
20
29,546,982
29,555,419
RGD:1600115
ENSEMBL
G
Paf1
Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
ISO
1
83,501,213
83,506,791
RGD:1624291
RGD
G
Paf1
Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
IEA
1
83,501,213
83,506,791
RGD:1600115
ENSEMBL
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Pou5f1
POU class 5 homeobox 1
ISO
RGD:1624291
RGD
G
Rif1
RAP1 interacting factor homolog (yeast)
ISO
3
33,574,934
33,624,794
RGD:1624291
RGD
G
Rtf1
Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
IEA
3
106,190,937
106,250,416
RGD:1600115
ENSEMBL
G
Rtf1
Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
IEA
3
106,190,937
106,250,416
RGD:1600115
ENSEMBL
G
Smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
ISO
8
20,720,915
20,812,157
RGD:1624291
RGD
G
Smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
IEA
8
20,720,915
20,812,157
RGD:1600115
ENSEMBL
G
Smc1a
structural maintenance of chromosomes 1A
ISO
X
41,503,393
41,547,830
RGD:1624291
RGD
G
Smc3
structural maintenance of chromosomes 3
ISO
1
259,822,480
259,865,602
RGD:1624291
RGD
G
Smc3
structural maintenance of chromosomes 3
IEA
1
259,822,480
259,865,602
RGD:1600115
ENSEMBL
G
Sox2
SRY (sex determining region Y)-box 2
ISO
2
120,969,021
120,971,430
RGD:1624291
RGD
G
Sox2
SRY (sex determining region Y)-box 2
ISO
2
120,969,021
120,971,430
RGD:1624291
RGD
G
Stag2
stromal antigen 2
ISO
X
2,840,102
2,970,905
RGD:1624291
RGD
G
Stag2
stromal antigen 2
IEA
X
2,840,102
2,970,905
RGD:1600115
ENSEMBL
G
Stat3
signal transducer and activator of transcription 3 (acute-phase response factor)
ISO
10
89,821,078
89,872,970
RGD:1624291
RGD
G
Stat3
signal transducer and activator of transcription 3 (acute-phase response factor)
IEA
10
89,821,078
89,872,970
RGD:1600115
ENSEMBL
G
Tbx3
T-box 3
ISO
12
38,155,494
38,166,670
RGD:1624291
RGD
G
Tbx3
T-box 3
IEA
12
38,155,494
38,166,670
RGD:1600115
ENSEMBL
G
Tcl1a
T-cell leukemia/lymphoma 1A
ISO
6
129,370,968
129,376,961
RGD:1624291
RGD
G
Tcl1a
T-cell leukemia/lymphoma 1A
IEA
6
129,370,968
129,376,961
RGD:1600115
ENSEMBL
G
Tet1
tet methylcytosine dioxygenase 1
ISO
20
25,131,169
25,155,785
RGD:1624291
RGD
G
Tfap2c
transcription factor AP-2 gamma
ISO
3
163,459,283
163,467,166
RGD:1624291
RGD
G
Tpt1
tumor protein, translationally-controlled 1
ISO
15
56,752,464
56,755,288
RGD:1624291
RGD
G
Zcchc11
zinc finger, CCHC domain containing 11
ISO
5
129,565,023
129,860,103
RGD:1624291
RGD
G
Zcchc11
zinc finger, CCHC domain containing 11
IEA
5
129,565,023
129,860,103
RGD:1600115
ENSEMBL
Term paths to the root one longest all shortest one shortest all one shortest and longest all longest