Gene: Efnb1 (ephrin B1) Rattus norvegicus
Analyze
Symbol: Efnb1
Name: ephrin B1
Description: ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN nervous system development; axon guidance (ortholog); embryonic pattern specification (ortholog); PARTICIPATES IN altered ephrin - ephrin receptor bidirectional signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Craniofrontonasal Dysplasia (ortholog); craniofrontonasal syndrome (ortholog); Craniosynostoses (ortholog); FOUND IN synapse; cytoplasm (ortholog); extracellular exosome (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ELK ligand; ELK-L; EPH-related receptor tyrosine kinase ligand 2; ephrin-B1; LERK-2; LERK2
Orthologs:
Homo sapiens (human) : EFNB1 (ephrin B1)  HGNC
Mus musculus (house mouse) : Efnb1 (ephrin B1)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Efnb1 (ephrin B1)
Pan paniscus (bonobo/pygmy chimpanzee) : EFNB1 (ephrin B1)
Canis lupus familiaris (dog) : EFNB1 (ephrin B1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Efnb1 (ephrin B1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X68,891,227 - 68,904,034 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0X69,764,314 - 69,777,121 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4X87,163,176 - 87,175,982 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X87,236,467 - 87,249,273 (+)NCBI
CeleraX64,624,957 - 64,637,749 (+)NCBI
Cytogenetic MapXq22NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Efnb1
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 2540
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2017-06-13
Status: ACTIVE