Gene: Kdm3a (lysine demethylase 3A) Rattus norvegicus
Analyze
Symbol: Kdm3a
Name: lysine demethylase 3A
Description: ENCODES a protein that exhibits androgen receptor binding (ortholog); core promoter binding (ortholog); histone demethylase activity (H3-K9 specific) (ortholog); INVOLVED IN male gonad development; positive regulation of gene expression; response to hypoxia; PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Hypoxia; Askin's tumor (ortholog); bone Ewing's sarcoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleoplasm (ortholog); INTERACTS WITH 3H-1,2-dithiole-3-thione; allethrin; ammonium chloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: jmjC domain-containing histone demethylation protein 2A; Jmjd1; Jmjd1a; jumonji domain containing 1; jumonji domain containing 1A; jumonji domain-containing protein 1A; LOC312440; lysine (K)-specific demethylase 3A; lysine-specific demethylase 3A; probable zinc finger protein; testis-specific gene A protein; zinc finger protein TSGA
Orthologs:
Homo sapiens (human) : KDM3A (lysine demethylase 3A)  HGNC  AGR
Mus musculus (house mouse) : Kdm3a (lysine (K)-specific demethylase 3A)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Kdm3a (lysine demethylase 3A)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM3A (lysine demethylase 3A)
Canis lupus familiaris (dog) : KDM3A (lysine demethylase 3A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm3a (lysine demethylase 3A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0499,503,160 - 99,547,315 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.04164,282,422 - 164,326,579 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.44104,866,501 - 104,911,355 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14105,110,981 - 105,155,233 (-)NCBI
Celera492,789,151 - 92,833,037 (-)NCBI
Cytogenetic Map4q31NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Kdm3a
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 708351
Created: 2003-09-23
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE