Gene: T (T brachyury transcription factor) Rattus norvegicus
Symbol: T
Name: T brachyury transcription factor
Description: ENCODES a protein that exhibits RNA polymerase II activating transcription factor binding (ortholog); RNA polymerase II core promoter proximal region sequence-specific DNA binding (ortholog); RNA polymerase II distal enhancer sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to retinoic acid; anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH Neural Tube Defects (ortholog); Sacral Agenesis with Vertebral Anomalies (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear chromatin (ortholog); INTERACTS WITH bisphenol A; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 5-fluorouracil (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: brachyury; brachyury homolog; brachyury homolog (mouse); LOC292301; T, brachyury homolog; T, brachyury homolog (mouse)
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0152,887,067 - 52,897,323 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0154,139,554 - 54,147,385 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4146,937,223 - 46,944,988 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1146,940,188 - 46,947,933 (-)NCBI
Celera148,061,384 - 48,069,149 (-)NCBI
Cytogenetic Map1q11NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on T
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1310141
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2016-05-10
Status: ACTIVE