Gene: Pdx1 (pancreatic and duodenal homeobox 1) Rattus norvegicus
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Symbol: Pdx1
Name: pancreatic and duodenal homeobox 1
Description: ENCODES a protein that exhibits DNA binding transcription factor activity; promoter-specific chromatin binding; protein complex binding; INVOLVED IN animal organ regeneration; animal organ senescence; cell differentiation; PARTICIPATES IN forkhead class A signaling pathway; maturity onset diabetes of the young pathway; type 2 diabetes mellitus pathway; ASSOCIATED WITH Diabetes Mellitus, Experimental; Diabetes Mellitus, Type 2; Fetal Growth Retardation; FOUND IN cytoplasm; nucleus; intracellular (ortholog); INTERACTS WITH 17beta-estradiol; 9-cis-retinoic acid; aldehydo-D-glucose
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: IDX-1; Idx1; Insulin promoter factor 1; insulin promotor factor 1; IPF-1; Ipf1; islet/duodenum homeobox 1; islet/duodenum homeobox-1; pancreas/duodenum homeobox protein 1; pancreatic and duodenal homeobox gene 1; somatostatin transactivating factor 1; somatostatin-transactivating factor 1; STF-1; Stf1
Orthologs:
Homo sapiens (human) : PDX1 (pancreatic and duodenal homeobox 1)  HGNC  AGR
Mus musculus (house mouse) : Pdx1 (pancreatic and duodenal homeobox 1)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Pdx1 (pancreatic and duodenal homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PDX1 (pancreatic and duodenal homeobox 1)
Canis lupus familiaris (dog) : PDX1 (pancreatic and duodenal homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdx1 (pancreatic and duodenal homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0129,496,044 - 9,501,211 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01211,609,488 - 11,614,655 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera129,495,501 - 9,500,668 (-)NCBICelera
Cytogenetic Map12p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdx1
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 62387
Created: 2001-04-26
Species: Rattus norvegicus
Last Modified: 2017-10-31
Status: ACTIVE