Gene: Pou5f1 (POU class 5 homeobox 1) Rattus norvegicus
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Symbol: Pou5f1
Name: POU class 5 homeobox 1
Description: ENCODES a protein that exhibits DNA binding transcription factor activity; HMG box domain binding; POU domain binding; INVOLVED IN regulation of transcription, DNA-templated; response to cytokine; blastocyst development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Amphetamine-Related Disorders (ortholog); Carcinoma in Situ (ortholog); FOUND IN nucleus; cytoplasm (ortholog); cytosol (ortholog); INTERACTS WITH 3-isobutyl-1-methyl-7H-xanthine; bisphenol A; cadmium dichloride
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: POU domain, class 5, transcription factor 1
Orthologs:
Homo sapiens (human) : POU5F1 (POU class 5 homeobox 1)  HGNC  AGR
Mus musculus (house mouse) : Pou5f1 (POU domain, class 5, transcription factor 1)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Pou5f1 (POU class 5 homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : POU5F1 (POU class 5 homeobox 1)
Canis lupus familiaris (dog) : POU5F1 (POU class 5 homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pou5f1 (POU class 5 homeobox 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,747,231 - 3,751,994 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0205,833,973 - 5,838,736 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera20650,325 - 655,095 (-)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pou5f1
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1359491
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2017-10-31
Status: ACTIVE