Gene: Pou5f1 (POU class 5 homeobox 1) Rattus norvegicus
Symbol: Pou5f1
Name: POU class 5 homeobox 1
Description: ENCODES a protein that exhibits HMG box domain binding; POU domain binding; RNA polymerase II transcription coactivator activity; INVOLVED IN regulation of transcription, DNA-templated; response to cytokine; blastocyst growth (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Carcinoma in Situ (ortholog); Carcinoma, Embryonal (ortholog); Carcinoma, Transitional Cell (ortholog); FOUND IN nucleus; cytoplasm (ortholog); cytosol (ortholog); INTERACTS WITH 3-isobutyl-1-methyl-7H-xanthine; bisphenol A; cadmium dichloride
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: POU domain, class 5, transcription factor 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0203,747,231 - 3,751,994 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0205,833,973 - 5,838,736 (-)NCBIRnor5.0rn5Rnor5.0
Celera20650,325 - 655,095 (-)NCBI
Cytogenetic Map20 NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pou5f1
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1359491
Created: 2005-07-29
Species: Rattus norvegicus
Last Modified: 2016-05-31
Status: ACTIVE