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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of autophagy
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Accession:GO:0010506 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.


show annotations for term's descendants           Sort by:
regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER2 alkaline ceramidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:39,190,873...39,223,590
Ensembl chr11:39,190,115...39,219,776 		JBrowse link
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G BECN1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236 		JBrowse link
G BOK BCL2 family apoptosis regulator BOK involved_in ISO (PMID:24113155) UniProt PMID:24113155 NCBI chr25:51,449,700...51,450,967 JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,664,942...45,688,777
Ensembl chr11:45,666,293...45,688,780 		JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:22,995,677...23,050,084
Ensembl chr24:22,995,672...23,049,287 		JBrowse link
G CISD1 CDGSH iron sulfur domain 1 involved_in IEA InterPro GO_REF:0000002
G CISD2 CDGSH iron sulfur domain 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr32:24,257,909...24,274,732
Ensembl chr32:24,257,994...24,274,064 		JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,252,543...18,266,033
Ensembl chr 6:18,254,139...18,266,033 		JBrowse link
G CRYBA1 crystallin beta A1 ISO RGD PMID:21266465 RGD:126925759 NCBI chr 9:43,372,507...43,378,561
Ensembl chr 9:43,372,505...43,378,590 		JBrowse link
G DCAF12 DDB1 and CUL4 associated factor 12 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:31267705) UniProt
Ensembl		 PMID:31267705 GO_REF:0000107 NCBI chr11:50,843,818...50,878,833
Ensembl chr11:50,845,773...50,878,838 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 involved_in ISO PMID:28694771 UniProt PMID:28694771 RGD:14390049 NCBI chr10:1,606,693...1,612,410
Ensembl chr10:1,606,693...1,611,303 		JBrowse link
G DEPP1 DEPP autophagy regulator 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr28:2,463,770...2,465,240
Ensembl chr28:2,464,584...2,465,210 		JBrowse link
G DRAM1 DNA damage regulated autophagy modulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:40,759,739...40,794,666
Ensembl chr15:40,758,810...40,792,906 		JBrowse link
G DRAM2 DNA damage regulated autophagy modulator 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:40,878,094...40,898,883
Ensembl chr 6:40,877,746...40,898,843 		JBrowse link
G EP400 E1A binding protein p400 involved_in IEA InterPro GO_REF:0000002 NCBI chr26:848,028...951,135
Ensembl chr26:848,016...951,171 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18443001) Ensembl
MGI		 PMID:18443001 GO_REF:0000107 NCBI chr 6:29,193,192...29,226,935
Ensembl chr 6:29,196,421...29,226,887 		JBrowse link
G FBXL2 F-box and leucine rich repeat protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:3,498,253...3,606,016
Ensembl chr23:3,498,979...3,607,093 		JBrowse link
G GPR137 G protein-coupled receptor 137 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:52,776,857...52,781,050
Ensembl chr18:52,776,858...52,779,783 		JBrowse link
G GPR137B G protein-coupled receptor 137B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:3,819,338...3,864,690
Ensembl chr 4:3,825,602...3,864,780 		JBrowse link
G KAT8 lysine acetyltransferase 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23863932) MGI
Ensembl		 PMID:23863932 GO_REF:0000107 NCBI chr 6:17,114,528...17,125,287
Ensembl chr 6:17,114,528...17,125,203 		JBrowse link
G KEAP1 kelch like ECH associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,651,070...50,661,178
Ensembl chr20:50,650,711...50,658,496 		JBrowse link
G LAMP3 lysosomal associated membrane protein 3 involved_in ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chr34:16,092,172...16,126,563 JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta involved_in ISO (MGI:5645828|PMID:25915474) ParkinsonsUK-UCL PMID:25915474 MGI:5645828 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530 		JBrowse link
G LOC102154780 CDGSH iron-sulfur domain-containing protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:72,536,932...72,546,574 JBrowse link
G LOC119877912 beclin-1 involved_in IEA Ensembl GO_REF:0000107
G LOC488622 myeloid cell nuclear differentiation antigen involved_in ISO (PMID:21573174) UniProt PMID:21573174 NCBI chr38:22,874,345...22,892,362 JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870 		JBrowse link
G MAPK15 mitogen-activated protein kinase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,317,061...37,322,792
Ensembl chr13:37,316,424...37,322,792 		JBrowse link
G MAPT microtubule associated protein tau acts_upstream_of_or_within ISO (PMID:19074461) MGI PMID:19074461 NCBI chr 9:9,572,174...9,674,082
Ensembl chr 9:9,570,557...9,674,349 		JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26681805) Ensembl
MGI		 PMID:26681805 GO_REF:0000107 NCBI chr19:12,905,336...13,030,901
Ensembl chr19:12,982,394...13,020,083 		JBrowse link
G MTCL1 microtubule crosslinking factor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:74,840,271...74,967,849
Ensembl chr 7:74,840,032...74,967,305 		JBrowse link
G MTCL2 microtubule crosslinking factor 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr24:25,525,564...25,602,158
Ensembl chr24:25,531,865...25,600,727 		JBrowse link
G MTCL3 MTCL family member 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:66,152,749...66,207,001 JBrowse link
G MTMR3 myotubularin related protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:23,047,500...23,187,694
Ensembl chr26:23,047,345...23,186,262 		JBrowse link
G MTMR4 myotubularin related protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:33,110,983...33,136,843
Ensembl chr 9:33,112,143...33,136,684 		JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G NLRP6 NLR family pyrin domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24581500) Ensembl
MGI		 PMID:24581500 GO_REF:0000107 NCBI chr18:25,433,481...25,440,703
Ensembl chr18:25,433,698...25,440,740 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in ISO PMID:28694771 UniProt PMID:28694771 RGD:14390049 NCBI chr 6:18,222,367...18,224,015
Ensembl chr 6:18,222,515...18,224,014 		JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,663,381...48,800,350
Ensembl chr 7:48,663,381...48,800,437 		JBrowse link
G PIK3R2 phosphoinositide-3-kinase regulatory subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,826,037...44,838,449
Ensembl chr20:44,826,339...44,836,558 		JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:27,902,500...27,973,609
Ensembl chr23:27,902,840...27,971,892 		JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,464,019...10,642,365
Ensembl chr 2:10,463,010...10,640,327 		JBrowse link
G PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:23,445,350...23,473,195
Ensembl chr 9:23,445,482...23,470,184 		JBrowse link
G PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:1,670,076...1,680,975
Ensembl chr10:1,672,380...1,680,840 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764 		JBrowse link
G PYCARD PYD and CARD domain containing involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24581500) Ensembl
MGI		 PMID:24581500 GO_REF:0000107 NCBI chr 6:17,049,352...17,051,348
Ensembl chr 6:17,049,705...17,051,240 		JBrowse link
G RAB39B RAB39B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:123,245,227...123,251,283
Ensembl chr  X:123,247,760...123,251,288 		JBrowse link
G RAB8A RAB8A, member RAS oncogene family involved_in ISS UniProt GO_REF:0000024 NCBI chr20:46,334,601...46,351,907
Ensembl chr20:46,334,601...46,351,907 		JBrowse link
G RMC1 regulator of MON1-CCZ1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:64,802,506...64,819,383
Ensembl chr 7:64,802,557...64,819,510 		JBrowse link
G RPTOR regulatory associated protein of MTOR complex 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:1,012,512...1,345,872
Ensembl chr 9:1,013,603...1,344,148 		JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107
G TPCN2 two pore segment channel 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:48,956,833...48,984,499
Ensembl chr18:48,957,249...48,984,564 		JBrowse link
G TRIB3 tribbles pseudokinase 3 involved_in ISO PMID:28694771 UniProt PMID:28694771 RGD:14390049 NCBI chr24:20,450,281...20,461,141
Ensembl chr24:20,451,001...20,457,510 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:40,355,070...40,437,758
Ensembl chr 5:40,354,263...40,435,747 		JBrowse link
G ULK3 unc-51 like kinase 3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr30:37,897,641...37,903,625
Ensembl chr30:37,897,804...37,903,700 		JBrowse link
G USP10 ubiquitin specific peptidase 10 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:67,736,215...67,774,756
Ensembl chr 5:67,736,730...67,809,206 		JBrowse link
G USP13 ubiquitin specific peptidase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:13,059,099...13,175,980
Ensembl chr34:13,059,092...13,171,234 		JBrowse link
G USP33 ubiquitin specific peptidase 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:69,118,953...69,170,864
Ensembl chr 6:69,118,333...69,169,966 		JBrowse link
G UVRAG UV radiation resistance associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:22,505,968...22,821,027
Ensembl chr21:22,507,162...22,820,824 		JBrowse link
G VPS29 VPS29 retromer complex component NOT|involved_in ISO (PMID:24603492) ParkinsonsUK-UCL PMID:24603492 NCBI chr26:8,301,699...8,309,364
Ensembl chr26:8,301,699...8,309,364 		JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:17,504,949...17,588,037 JBrowse link
G WDR24 WD repeat domain 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,887,968...39,891,633
Ensembl chr 6:39,887,667...39,891,588 		JBrowse link
G WDR41 WD repeat domain 41 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 3:29,082,481...29,286,632
Ensembl chr 3:29,073,073...29,286,681 		JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:5573106|PMID:24753614) UniProt PMID:24753614 MGI:5573106 NCBI chr26:22,162,675...22,168,149
Ensembl chr26:22,163,222...22,168,105 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (PMID:18443001) MGI PMID:18443001 NCBI chr11:54,976,978...54,996,140
Ensembl chr11:54,976,976...54,996,065 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18443001) Ensembl
MGI		 PMID:18443001 GO_REF:0000107 NCBI chr15:2,669,546...2,708,480
Ensembl chr15:2,670,326...2,709,160 		JBrowse link
negative regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC6 histone deacetylase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,004,268...42,024,726
Ensembl chr  X:42,004,591...42,024,427 		JBrowse link
G LYPLA1 lysophospholipase 1 involved_in ISO (PMID:37802024) UniProt PMID:37802024 NCBI chr29:5,656,376...5,696,901
Ensembl chr29:5,616,961...5,697,284 		JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BECN1 beclin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27994061) Ensembl
MGI		 PMID:27994061 GO_REF:0000107 NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236 		JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23918802) Ensembl
MGI		 PMID:23918802 GO_REF:0000107 NCBI chr12:1,341,202...1,354,602
Ensembl chr12:1,341,191...1,354,584 		JBrowse link
G FEZ1 fasciculation and elongation protein zeta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,001,927...9,044,330
Ensembl chr 5:9,001,989...9,044,332 		JBrowse link
G FEZ2 fasciculation and elongation protein zeta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,043,449...29,086,104
Ensembl chr17:29,044,355...29,086,100 		JBrowse link
G LOC119877912 beclin-1 involved_in IEA Ensembl GO_REF:0000107
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870 		JBrowse link
G MTM1 myotubularin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23695157) Ensembl
MGI
TreeGrafter		 PMID:23695157 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:118,820,644...118,917,166
Ensembl chr  X:118,820,494...118,916,368 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,222,367...18,224,015
Ensembl chr 6:18,222,515...18,224,014 		JBrowse link
G PHF23 PHD finger protein 23 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:32,202,636...32,207,738
Ensembl chr 5:32,202,825...32,207,000 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123 		JBrowse link
G SCFD1 sec1 family domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:9,970,724...10,077,123
Ensembl chr 8:9,970,790...10,077,122 		JBrowse link
G SEC22B SEC22 homolog B, vesicle trafficking protein involved_in ISO (PMID:21242315) UniProt PMID:21242315 NCBI chr17:57,094,038...57,115,891
Ensembl chr17:57,053,218...57,115,886 		JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107
G TMEM39A transmembrane protein 39A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr33:23,083,979...23,121,269
Ensembl chr33:23,084,919...23,116,210 		JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC16A C-type lectin domain containing 16A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,560,940...31,757,100
Ensembl chr 6:31,562,834...31,757,678 		JBrowse link
G PHF23 PHD finger protein 23 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:32,202,636...32,207,738
Ensembl chr 5:32,202,825...32,207,000 		JBrowse link
G RUBCN rubicon autophagy regulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr33:28,947,439...29,011,737
Ensembl chr33:28,946,944...29,009,346 		JBrowse link
G TMEM39A transmembrane protein 39A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr33:23,083,979...23,121,269
Ensembl chr33:23,084,919...23,116,210 		JBrowse link
G UBQLN4 ubiquilin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:41,764,209...41,778,457
Ensembl chr 7:41,764,253...41,777,002 		JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1A adrenoceptor alpha 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27994061) Ensembl
MGI		 PMID:27994061 GO_REF:0000107 NCBI chr25:30,690,959...30,801,484
Ensembl chr25:30,693,571...30,801,486 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658 		JBrowse link
G BECN1 beclin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27994061) Ensembl
MGI		 PMID:27994061 GO_REF:0000107 NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236 		JBrowse link
G BMF Bcl2 modifying factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr30:7,301,000...7,321,949
Ensembl chr30:7,274,174...7,322,034 		JBrowse link
G CPTP ceramide-1-phosphate transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,498,163...56,501,918
Ensembl chr 5:56,498,207...56,500,845 		JBrowse link
G DAP death associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr34:3,616,960...3,682,424
Ensembl chr34:3,617,000...3,680,793 		JBrowse link
G DAPL1 death associated protein like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr36:4,678,544...4,698,711
Ensembl chr36:4,678,563...4,698,710 		JBrowse link
G EIF4E eukaryotic translation initiation factor 4E NOT|involved_in ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chr32:21,064,202...21,108,998
Ensembl chr32:21,065,270...21,124,483 		JBrowse link
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:17,194,588...17,214,498
Ensembl chr34:17,195,562...17,214,052 		JBrowse link
G EIF4G2 eukaryotic translation initiation factor 4 gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:33,967,908...33,980,017
Ensembl chr21:33,952,793...33,977,653 		JBrowse link
G EIF4G3 eukaryotic translation initiation factor 4 gamma 3 NOT|involved_in ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chr 2:77,822,686...78,149,943
Ensembl chr 2:77,822,688...78,149,443 		JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396 		JBrowse link
G ERFE erythroferrone involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:48,656,576...48,665,620 JBrowse link
G FOXK1 forkhead box K1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,863,093...12,931,877
Ensembl chr 6:12,869,940...12,930,954 		JBrowse link
G FOXK2 forkhead box K2 involved_in IEA Ensembl GO_REF:0000107
G GATA4 GATA binding protein 4 ISO RGD PMID:19901028 RGD:5131537 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989 		JBrowse link
G GOLGA2 golgin A2 involved_in ISO (PMID:22735382) ParkinsonsUK-UCL PMID:22735382 NCBI chr 9:55,234,836...55,251,698 JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20041218) Ensembl
MGI		 PMID:20041218 GO_REF:0000107 NCBI chr30:28,195,296...28,379,343
Ensembl chr30:28,195,673...28,379,444 		JBrowse link
G IL10 interleukin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,933,285...5,937,057
Ensembl chr 7:5,933,285...5,937,057 		JBrowse link
G IL10RA interleukin 10 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,675,775...15,688,935
Ensembl chr 5:15,677,547...15,682,163 		JBrowse link
G IL3 interleukin 3 acts_upstream_of_or_within ISO (PMID:15680329) MGI PMID:15680329 NCBI chr11:20,330,480...20,332,668
Ensembl chr11:20,330,480...20,332,668 		JBrowse link
G KDM4A lysine demethylase 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,521,760...16,570,965
Ensembl chr15:16,521,700...16,571,000 		JBrowse link
G KIF25 kinesin family member 25 involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chr 1:55,537,884...55,588,346
Ensembl chr 1:55,537,879...55,588,226 		JBrowse link
G KLHL22 kelch like family member 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:30,248,253...30,281,989
Ensembl chr26:30,248,240...30,281,843 		JBrowse link
G LEP leptin involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395 		JBrowse link
G LEPR leptin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:44,684,118...44,775,626
Ensembl chr 5:44,688,109...44,775,636 		JBrowse link
G LOC119877912 beclin-1 involved_in IEA Ensembl GO_REF:0000107
G MCL1 MCL1 apoptosis regulator, BCL2 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:59,759,605...59,763,111
Ensembl chr17:59,759,605...59,763,111 		JBrowse link
G MIR223 microRNA mir-223 ISO RGD PMID:29608885 RGD:21408565 NCBI chr  X:50,838,131...50,838,233
Ensembl chr  X:50,838,131...50,838,233 		JBrowse link
G MTMR9 myotubularin related protein 9 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:26,571,383...26,624,948
Ensembl chr25:26,575,932...26,624,954 		JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:24725502 GO_REF:0000107 GO_REF:0000117 RGD:10040964 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO RGD PMID:26601421 RGD:13781888 NCBI chr18:14,110,045...14,211,268
Ensembl chr18:13,993,022...14,208,657 		JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,222,367...18,224,015
Ensembl chr 6:18,222,515...18,224,014 		JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:27994061) MGI PMID:27994061 NCBI chr13:35,302,439...35,541,336
Ensembl chr13:35,303,380...35,541,294 		JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106) UniProt PMID:23991106 NCBI chr17:51,623,628...51,683,039
Ensembl chr17:51,623,623...51,682,858 		JBrowse link
G RASIP1 Ras interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,583,169...107,597,683
Ensembl chr 1:107,581,424...107,597,682 		JBrowse link
G RNF5 ring finger protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23093945) Ensembl
MGI		 PMID:23093945 GO_REF:0000107 NCBI chr12:1,571,277...1,575,151
Ensembl chr12:1,571,420...1,573,506 		JBrowse link
G RPTOR regulatory associated protein of MTOR complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,012,512...1,345,872
Ensembl chr 9:1,013,603...1,344,148 		JBrowse link
G RRAGA Ras related GTP binding A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:38,886,990...38,888,634
Ensembl chr11:38,886,397...38,888,184 		JBrowse link
G RRAGB Ras related GTP binding B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:47,323,427...47,361,551
Ensembl chr  X:47,323,269...47,361,138 		JBrowse link
G RRAGC Ras related GTP binding C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:3,875,193...3,892,501
Ensembl chr15:3,874,116...3,892,504 		JBrowse link
G RRAGD Ras related GTP binding D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:48,583,350...48,625,032
Ensembl chr12:48,585,937...48,625,130 		JBrowse link
G RUBCN rubicon autophagy regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:28,947,439...29,011,737
Ensembl chr33:28,946,944...29,009,346 		JBrowse link
G SIRT2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583 		JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO RGD PMID:25049270 RGD:151361107 NCBI chr 5:65,313,105...65,343,858
Ensembl chr 5:65,313,105...65,343,858 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,539,660...20,614,631
Ensembl chr 9:20,539,697...20,612,672 		JBrowse link
G STK38L serine/threonine kinase 38 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:20,429,370...20,509,876
Ensembl chr27:20,429,372...20,510,059 		JBrowse link
G TBC1D14 TBC1 domain family member 14 involved_in ISO (PMID:22613832) BHF-UCL PMID:22613832 NCBI chr 3:58,992,743...59,097,581
Ensembl chr 3:58,926,237...59,097,621 		JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:25,904,381...25,922,531
Ensembl chr35:25,905,396...25,923,336 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in ISO (PMID:30902965) DisProt PMID:30902965 NCBI chr20:8,206,616...8,211,347
Ensembl chr20:8,206,616...8,211,323 		JBrowse link
G WASHC1 WASH complex subunit 1 involved_in ISO (MGI:5519172|PMID:23974797) UniProt PMID:23974797 MGI:5519172 NCBI chr27:42,102,694...42,118,850
Ensembl chr27:42,099,886...42,116,339 		JBrowse link
G WDR6 WD repeat domain 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:40,148,262...40,157,770
Ensembl chr20:40,148,928...40,157,650 		JBrowse link
G WNK1 WNK lysine deficient protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:42,764,184...42,914,591
Ensembl chr27:42,765,181...42,912,806 		JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSA cathepsin A involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:33,183,090...33,189,248
Ensembl chr24:33,183,090...33,189,248 		JBrowse link
G SNCA synuclein alpha involved_in ISO (PMID:20697033) ParkinsonsUK-UCL PMID:20697033 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383 		JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20705711) Ensembl
MGI		 PMID:20705711 GO_REF:0000107 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870 		JBrowse link
G LZTS1 leucine zipper tumor suppressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:36,764,235...36,814,204
Ensembl chr25:36,744,061...36,811,972 		JBrowse link
G MTOR mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25327288)
(PMID:16714284), (PMID:23274896)		 MGI
TreeGrafter
Ensembl		 PMID:16714284 PMID:23274896 PMID:25327288 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114 		JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17468177) Ensembl
MGI		 PMID:17468177 GO_REF:0000107 NCBI chr 7:64,764,941...64,802,507
Ensembl chr 7:64,760,121...64,802,902 		JBrowse link
G NRBP2 nuclear receptor binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,391,385...37,398,691
Ensembl chr13:37,392,436...37,398,076 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123 		JBrowse link
G POLDIP2 DNA polymerase delta interacting protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24797518) Ensembl
MGI		 PMID:24797518 GO_REF:0000107 NCBI chr 9:42,597,792...42,607,576
Ensembl chr 9:42,597,792...42,607,576 		JBrowse link
G QSOX1 quiescin sulfhydryl oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:13,718,799...13,754,115
Ensembl chr 7:13,718,799...13,754,114 		JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107
G TSC1 TSC complex subunit 1 involved_in ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 9:51,409,307...51,459,546
Ensembl chr 9:51,425,937...51,454,677 		JBrowse link
G TSC2 TSC complex subunit 2 ISO RGD PMID:24599401 RGD:11568679 NCBI chr 6:38,865,509...38,898,977
Ensembl chr 6:38,865,507...38,898,960 		JBrowse link
G USP36 ubiquitin specific peptidase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:2,547,316...2,587,360
Ensembl chr 9:2,550,452...2,585,108 		JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLEC16A C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chr 6:31,560,940...31,757,100
Ensembl chr 6:31,562,834...31,757,678 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123 		JBrowse link
G RNF41 ring finger protein 41 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24949970) Ensembl
MGI		 PMID:24949970 GO_REF:0000107 NCBI chr10:512,650...521,293
Ensembl chr10:514,635...542,395 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22044588) Ensembl
MGI		 PMID:22044588 GO_REF:0000107 NCBI chr27:40,521,751...40,549,304
Ensembl chr27:40,523,314...40,549,332 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22044588) Ensembl
MGI		 PMID:22044588 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G TSPO translocator protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:22,388,498...22,399,329
Ensembl chr10:22,274,405...22,399,297 		JBrowse link
G USP30 ubiquitin specific peptidase 30 ISO RGD PMID:24896179 RGD:13208875 NCBI chr26:17,918,852...17,981,947
Ensembl chr26:17,919,512...17,981,846 		JBrowse link
negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VPS13C vacuolar protein sorting 13 homolog C involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:26,600,181...26,776,347
Ensembl chr30:26,601,513...26,776,763 		JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG3 BAG cochaperone 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:29,792,612...29,815,466
Ensembl chr28:29,792,777...29,815,138 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:22017874) UniProt PMID:22017874 NCBI chr24:20,333,593...20,390,341 JBrowse link
G HSPB8 heat shock protein family B (small) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:15,337,718...15,349,993
Ensembl chr26:15,336,864...15,355,757 		JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G ZDHHC19 zinc finger DHHC-type palmitoyltransferase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:29,332,947...29,335,942
Ensembl chr33:29,332,959...29,336,531 		JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG2A autophagy related 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,258,070...52,277,953
Ensembl chr18:52,258,187...52,277,965 		JBrowse link
G BECN1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236 		JBrowse link
G ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,612,130...42,681,161
Ensembl chr 6:42,613,546...42,681,015 		JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,855,576...55,894,915
Ensembl chr 9:55,856,091...55,894,488 		JBrowse link
G MOAP1 modulator of apoptosis 1 involved_in ISO (PMID:33783314)
(MGI:6810697|PMID:33783314)		 UniProt PMID:33783314 MGI:6810697
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,464,019...10,642,365
Ensembl chr 2:10,463,010...10,640,327 		JBrowse link
G PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:23,445,350...23,473,195
Ensembl chr 9:23,445,482...23,470,184 		JBrowse link
G PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:1,670,076...1,680,975
Ensembl chr10:1,672,380...1,680,840 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501 		JBrowse link
G RAB3GAP2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:14,927,670...15,025,554
Ensembl chr38:14,928,628...15,025,865 		JBrowse link
G RALB RAS like proto-oncogene B involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:29,820,006...29,868,345
Ensembl chr19:29,768,359...29,868,335 		JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:61,439,414...61,471,414
Ensembl chr 6:61,439,415...61,462,087 		JBrowse link
G SNX18 sorting nexin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:60,803,245...60,945,317
Ensembl chr 4:60,835,783...60,945,828 		JBrowse link
G SNX30 sorting nexin family member 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,233,469...67,294,159
Ensembl chr11:67,233,256...67,289,224 		JBrowse link
G SNX4 sorting nexin 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr33:28,413,586...28,468,546
Ensembl chr33:28,419,128...28,469,488 		JBrowse link
G SNX7 sorting nexin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,004,307...51,388,283
Ensembl chr 6:51,025,203...51,094,539 		JBrowse link
G TRIM32 tripartite motif containing 32 involved_in ISO (PMID:37943659) UniProt PMID:37943659 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 ISO RGD PMID:23448468 RGD:13208863 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
G WDR45 WD repeat domain 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,221,261...42,237,535
Ensembl chr  X:42,218,046...42,226,422 		JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:15,115,098...15,147,893
Ensembl chr 9:15,115,315...15,149,147 		JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in ISS GO_Central GO_REF:0000024 NCBI chr 4:60,048,502...60,050,447
Ensembl chr 4:59,941,517...60,050,298 		JBrowse link
G ADRB2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107
G CALCOCO2 calcium binding and coiled-coil domain 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:25,050,603...25,078,147
Ensembl chr 9:25,050,690...25,077,557 		JBrowse link
G CLEC16A C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chr 6:31,560,940...31,757,100
Ensembl chr 6:31,562,834...31,757,678 		JBrowse link
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:42,520,241...42,593,886
Ensembl chr20:42,525,435...42,590,243 		JBrowse link
G LOC481473 immunity-related GTPase family M protein involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617 		JBrowse link
G LOC606863 immunity-related GTPase family M protein-like involved_in ISO (MGI:3656111|PMID:16888103) UniProt PMID:16888103 MGI:3656111 NCBI chr11:506,981...523,338
Ensembl chr11:509,636...510,829 		JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107
G TOM1 target of myb1 membrane trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:28,782,910...28,822,634
Ensembl chr10:28,775,300...28,822,570 		JBrowse link
positive regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGER advanced glycosylation end-product specific receptor ISO RGD PMID:22293957 RGD:7245565 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129 		JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:25117440 GO_REF:0000107 RGD:11552604 NCBI chr18:42,903,815...43,073,918
Ensembl chr18:42,932,513...43,072,827 		JBrowse link
G ATF6 activating transcription factor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28747345) MGI
Ensembl		 PMID:28747345 GO_REF:0000107 NCBI chr38:20,705,167...20,903,852
Ensembl chr38:20,709,038...20,903,814 		JBrowse link
G ATG101 autophagy related 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:2,931,595...2,934,914
Ensembl chr27:2,931,893...2,935,123 		JBrowse link
G ATG13 autophagy related 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,834,538...42,886,873
Ensembl chr18:42,836,755...42,886,855 		JBrowse link
G ATG16L1 autophagy related 16 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:44,761,034...44,800,033
Ensembl chr25:44,761,185...44,798,672 		JBrowse link
G ATG7 autophagy related 7 ISO RGD PMID:24674959 PMID:25639566 RGD:11553823 RGD:11553824 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800 		JBrowse link
G BECN1 beclin 1 involved_in IEA
ISO		 Ensembl
RGD		 PMID:21490676 PMID:24674959 GO_REF:0000107 RGD:11553823 RGD:6483070 NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236 		JBrowse link
G CCNY cyclin Y involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,387,962...1,720,497
Ensembl chr 2:1,390,082...1,720,357 		JBrowse link
G CDK16 cyclin dependent kinase 16 involved_in ISO (PMID:32098961) ComplexPortal PMID:32098961 NCBI chr  X:40,810,107...40,822,130
Ensembl chr  X:40,810,500...40,842,700 		JBrowse link
G DAPK1 death associated protein kinase 1 involved_in ISO (PMID:22095288) ParkinsonsUK-UCL PMID:22095288 NCBI chr 1:72,278,939...72,448,907
Ensembl chr 1:72,280,103...72,447,822 		JBrowse link
G DCN decorin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:31,833,492...31,887,699
Ensembl chr15:31,833,746...31,877,417 		JBrowse link
G DEPDC5 DEP domain containing 5, GATOR1 subcomplex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:24,629,369...24,754,728
Ensembl chr26:24,630,295...24,754,256 		JBrowse link
G DEPTOR DEP domain containing MTOR interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,859,526...18,993,464
Ensembl chr13:18,859,634...18,988,583 		JBrowse link
G DHRSX dehydrogenase/reductase X-linked involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:1,172,404...1,288,088
Ensembl chr  X:1,170,522...1,285,390 		JBrowse link
G ENDOG endonuclease G involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:54,809,470...54,812,795
Ensembl chr 9:54,809,530...54,813,042 		JBrowse link
G EP400 E1A binding protein p400 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:848,028...951,135
Ensembl chr26:848,016...951,171 		JBrowse link
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:42,176,093...42,195,718
Ensembl chr 5:42,176,291...42,195,711 		JBrowse link
G FOXO1 forkhead box O1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:603,433...706,961
Ensembl chr25:603,543...702,825 		JBrowse link
G FOXO3 forkhead box O3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198 		JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,129,116...112,138,714
Ensembl chr 1:112,103,825...112,138,559 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in ISO (MGI:5825416|PMID:26160071)
(MGI:5319706|PMID:22539723)		 BHF-UCL
UniProt		 PMID:22539723 PMID:26160071 MGI:5319706 MGI:5825416 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G HMGB1 high mobility group box 1 involved_in ISO (MGI:5634889|PMID:20819940)
(PMID:20819940)		 RGD
UniProt		 PMID:20819940 PMID:23604926 MGI:5634889 RGD:10402086 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165 		JBrowse link
G IFNB1 interferon beta 1 involved_in ISO (MGI:5695780|PMID:26451483) UniProt PMID:26451483 MGI:5695780 NCBI chr11:40,668,295...40,668,855
Ensembl chr11:40,668,295...40,668,855 		JBrowse link
G IFNG interferon gamma involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698 		JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699 		JBrowse link
G LOC119877912 beclin-1 involved_in IEA Ensembl GO_REF:0000107
G LOC481473 immunity-related GTPase family M protein involved_in ISO (PMID:16888103), (PMID:25891078), (PMID:28389568)
(PMID:25891078), (PMID:29420192)		 UniProt PMID:16888103 PMID:25891078 PMID:28389568 PMID:29420192 NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617 		JBrowse link
G LOC606863 immunity-related GTPase family M protein-like involved_in ISO (MGI:3656111|PMID:16888103)
(MGI:4354422|PMID:19620982), (MGI:6246109|PMID:24751652), (MGI:6840077|PMID:22874556)		 UniProt PMID:16888103 PMID:19620982 PMID:22874556 PMID:24751652 MGI:3656111 MGI:4354422 MGI:6246109 MGI:6840077 NCBI chr11:506,981...523,338
Ensembl chr11:509,636...510,829 		JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:26581593 RGD:12879823 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479 		JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 ISO RGD PMID:35078016 RGD:155804282 NCBI chr12:49,669,849...49,740,039
Ensembl chr12:49,672,389...49,739,850 		JBrowse link
G MEFV MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,964,776...37,984,830
Ensembl chr 6:37,970,608...37,983,737 		JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210 		JBrowse link
G MIR222 microRNA mir-222 ISO RGD PMID:33792838 RGD:152025536 NCBI chr  X:39,524,519...39,524,608
Ensembl chr  X:39,524,519...39,524,608 		JBrowse link
G MTDH metadherin involved_in ISO (PMID:21127263) UniProt PMID:21127263 NCBI chr29:41,675,601...41,732,389
Ensembl chr29:41,640,035...41,729,949 		JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:43,162,671...43,226,948
Ensembl chr14:43,163,571...43,227,103 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,636,850...64,667,232
Ensembl chr 2:64,635,519...64,667,232 		JBrowse link
G NPRL2 NPR2 like, GATOR1 complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:39,005,699...39,009,183
Ensembl chr20:39,005,734...39,009,189 		JBrowse link
G NPRL3 NPR3 like, GATOR1 complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:40,351,757...40,394,599
Ensembl chr 6:40,352,477...40,390,489 		JBrowse link
G OPTN optineurin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:23,356,471...23,390,569
Ensembl chr 2:23,357,237...23,392,511 		JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28747345) MGI
Ensembl		 PMID:28747345 GO_REF:0000107 NCBI chr 9:22,594,425...22,601,108
Ensembl chr 9:22,594,480...22,599,999 		JBrowse link
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:39,693,211...39,868,603
Ensembl chr21:39,695,520...39,784,639 		JBrowse link
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,072,495...42,077,741
Ensembl chr  X:42,073,457...42,077,543 		JBrowse link
G PLEKHF1 pleckstrin homology and FYVE domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:121,776,122...121,802,881
Ensembl chr 1:121,781,181...121,782,578
Ensembl chr 1:121,781,181...121,782,578 		JBrowse link
G PLK2 polo like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:45,359,865...45,365,496
Ensembl chr 2:45,360,374...45,367,441 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841 		JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:52,809,792...52,855,072
Ensembl chr 5:52,815,609...52,876,609 		JBrowse link
G PRKD1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:9,004,641...9,327,054
Ensembl chr 8:9,005,115...9,328,358 		JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:4,445,668...4,544,223
Ensembl chr29:4,375,785...4,517,168 		JBrowse link
G RNF152 ring finger protein 152 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:14,914,508...15,001,843
Ensembl chr 1:14,985,769...14,986,380 		JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:66,862,614...67,001,538
Ensembl chr 7:66,862,608...67,142,853 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,675,539...41,800,697
Ensembl chr20:41,675,599...41,800,612 		JBrowse link
G SH3BP4 SH3 domain binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:46,049,631...46,133,065
Ensembl chr25:46,049,475...46,155,519 		JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:61,439,414...61,471,414
Ensembl chr 6:61,439,415...61,462,087 		JBrowse link
G SLC35D3 solute carrier family 35 member D3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:29,426,003...29,429,272
Ensembl chr 1:29,425,559...29,428,270 		JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:31221056 RGD:150521664 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G SQSTM1 sequestosome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:1,859,776...1,869,289
Ensembl chr11:1,859,465...1,870,755 		JBrowse link
G STK11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,558,966...57,579,163
Ensembl chr20:57,559,424...57,579,118 		JBrowse link
G SVIP small VCP interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:44,408,467...44,418,160
Ensembl chr21:44,408,474...44,415,739 		JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:7,169,664...7,208,890
Ensembl chr10:7,168,007...7,208,899 		JBrowse link
G TFEB transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,367,979...10,423,478
Ensembl chr12:10,368,599...10,452,619 		JBrowse link
G TICAM1 TIR domain containing adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) ParkinsonsUK-UCL PMID:17658277 MGI:3718934 NCBI chr20:54,948,237...54,961,996
Ensembl chr20:54,959,525...54,961,780 		JBrowse link
G TLR9 toll like receptor 9 ISO RGD PMID:18632594 RGD:2301341 NCBI chr20:37,529,322...37,547,117
Ensembl chr20:37,542,340...37,547,114
Ensembl chr20:37,542,340...37,547,114 		JBrowse link
G TMEM59 transmembrane protein 59 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:54,959,895...54,991,978
Ensembl chr 5:54,960,069...54,987,758 		JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:39,575,782...39,593,389
Ensembl chr29:39,580,496...39,593,518 		JBrowse link
G TPCN1 two pore segment channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:10,599,898...10,662,269
Ensembl chr26:10,599,780...10,660,767 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725 		JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:28,677,196...28,696,413
Ensembl chr21:28,682,973...28,695,185 		JBrowse link
G TRIM23 tripartite motif containing 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,323,341...51,360,193
Ensembl chr 2:51,325,038...51,360,117 		JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974 		JBrowse link
G TRIM34 tripartite motif containing 34 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:28,635,177...28,656,759
Ensembl chr21:28,635,396...28,654,490 		JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466 		JBrowse link
G TRIM58 tripartite motif containing 58 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:1,582,244...1,599,482
Ensembl chr14:1,576,272...1,598,487 		JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:28,595,887...28,611,562
Ensembl chr21:28,595,448...28,611,124 		JBrowse link
G TRIM65 tripartite motif containing 65 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:4,713,535...4,720,268
Ensembl chr 9:4,714,086...4,718,592 		JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355 		JBrowse link
G TSC2 TSC complex subunit 2 involved_in ISO (MGI:5509101|PMID:23878245) ParkinsonsUK-UCL PMID:23878245 MGI:5509101 NCBI chr 6:38,865,509...38,898,977
Ensembl chr 6:38,865,507...38,898,960 		JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:54,988,200...55,023,414
Ensembl chr12:54,988,264...55,021,626 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:40,355,070...40,437,758
Ensembl chr 5:40,354,263...40,435,747 		JBrowse link
G USP20 ubiquitin specific peptidase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,966,180...54,009,312
Ensembl chr 9:53,966,183...54,009,317 		JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (PMID:23184933) UniProt PMID:23184933 NCBI chr26:22,162,675...22,168,149
Ensembl chr26:22,163,222...22,168,105 		JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,972,369...4,984,218
Ensembl chr15:4,972,956...4,980,371 		JBrowse link
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L11 BCL2 like 11 ISO RGD PMID:25772147 RGD:13782257 NCBI chr17:35,619,804...35,665,782
Ensembl chr17:35,619,582...35,664,587 		JBrowse link
G BID BH3 interacting domain death agonist ISO RGD PMID:25772147 RGD:13782257 NCBI chr27:45,344,304...45,355,735
Ensembl chr27:45,337,145...45,384,059 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 ISO RGD PMID:25772147 RGD:13782257 NCBI chr10:1,606,693...1,612,410
Ensembl chr10:1,606,693...1,611,303 		JBrowse link
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BNIP3 BCL2 interacting protein 3 ISO RGD PMID:23698117 RGD:11561968 NCBI chr28:40,037,681...40,050,499
Ensembl chr28:40,038,643...40,049,797 		JBrowse link
G FBXO7 F-box protein 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:30,928,059...30,948,858
Ensembl chr10:30,928,329...30,948,977 		JBrowse link
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLK3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:15,519,042...15,523,960
Ensembl chr15:15,519,026...15,524,230 		JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in ISS GO_Central GO_REF:0000024 NCBI chr 4:60,048,502...60,050,447
Ensembl chr 4:59,941,517...60,050,298 		JBrowse link
G ADRB2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G SESN2 sestrin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22958918) Ensembl
MGI		 PMID:22958918 GO_REF:0000107 NCBI chr 2:72,151,464...72,168,861
Ensembl chr 2:72,151,868...72,168,492 		JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chr 1:94,997,240...95,062,424
Ensembl chr 1:94,997,290...95,064,468 		JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25332431) MGI
Ensembl		 PMID:25332431 GO_REF:0000107 NCBI chr 8:50,291,797...50,401,202
Ensembl chr 8:50,271,010...50,401,313 		JBrowse link
positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BNIP3 BCL2 interacting protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19273585) MGI
Ensembl		 PMID:19273585 GO_REF:0000107 NCBI chr28:40,037,681...40,050,499
Ensembl chr28:40,038,643...40,049,797 		JBrowse link
G BNIP3L BCL2 interacting protein 3 like acts_upstream_of_or_within ISO (PMID:19273585) MGI PMID:19273585 NCBI chr25:31,133,512...31,149,750
Ensembl chr25:31,136,168...31,148,905 		JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,664,942...45,688,777
Ensembl chr11:45,666,293...45,688,780 		JBrowse link
G DCN decorin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23798385) MGI
Ensembl		 PMID:23798385 GO_REF:0000107 NCBI chr15:31,833,492...31,887,699
Ensembl chr15:31,833,746...31,877,417 		JBrowse link
G ECSCR endothelial cell surface expressed chemotaxis and apoptosis regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:34,763,814...34,773,491 JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20453062) MGI
Ensembl		 PMID:20453062 GO_REF:0000107 NCBI chr 1:36,835,775...36,977,653
Ensembl chr 1:36,870,594...36,931,847 		JBrowse link
G GNAI3 G protein subunit alpha i3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,275,060...42,315,545
Ensembl chr 6:42,276,998...42,315,533 		JBrowse link
G GPSM1 G protein signaling modulator 1 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chr 9:49,124,828...49,152,079
Ensembl chr 9:49,118,627...49,152,208 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19273585) Ensembl
MGI		 PMID:19273585 GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G HMOX1 heme oxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20705711) Ensembl
MGI		 PMID:20705711 GO_REF:0000107 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773 		JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (MGI:5819337|PMID:23778976) ParkinsonsUK-UCL PMID:23778976 MGI:5819337 NCBI chr  X:122,232,052...122,253,499
Ensembl chr  X:122,235,878...122,250,562 		JBrowse link
G IL4 interleukin 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534 		JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23798385) MGI
Ensembl		 PMID:23798385 GO_REF:0000107 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042 		JBrowse link
G LACRT lacritin involved_in ISO (PMID:23640897) FlyBase PMID:23640897 NCBI chr27:735,639...738,355 JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:54,991,528...55,045,976
Ensembl chr 4:54,994,227...55,017,098 		JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (MGI:5819337|PMID:23778976) ParkinsonsUK-UCL PMID:23778976 MGI:5819337 NCBI chr12:49,669,849...49,740,039
Ensembl chr12:49,672,389...49,739,850 		JBrowse link
G PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 involved_in IEA Ensembl GO_REF:0000107
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17476689) Ensembl
MGI		 PMID:17476689 GO_REF:0000107 NCBI chr  X:42,072,495...42,077,741
Ensembl chr  X:42,073,457...42,077,543 		JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123 		JBrowse link
G RAB12 RAB12, member RAS oncogene family involved_in ISO (MGI:5574288|PMID:23357852) UniProt PMID:23357852 MGI:5574288 NCBI chr 7:74,752,697...74,791,872 JBrowse link
G RUFY4 RUN and FYVE domain containing 4 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr37:24,809,365...24,830,254
Ensembl chr37:24,809,359...24,829,724 		JBrowse link
G SCOC short coiled-coil protein involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chr19:2,451,678...2,494,052
Ensembl chr19:2,452,707...2,494,034 		JBrowse link
G SESN1 sestrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:65,958,995...66,057,369
Ensembl chr12:65,960,066...66,057,035 		JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:72,151,464...72,168,861
Ensembl chr 2:72,151,868...72,168,492 		JBrowse link
G SESN3 sestrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:5,827,957...5,899,540
Ensembl chr21:5,777,780...5,892,805 		JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:18296641)
(MGI:3776699|PMID:18296641), (MGI:4940431|PMID:21189328)		 UniProt PMID:18296641 PMID:21189328 MGI:3776699 MGI:4940431 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279 		JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:34,783,947...34,792,204
Ensembl chr 2:34,784,232...34,789,072 		JBrowse link
G SUPT5H SPT5 homolog, DSIF elongation factor subunit involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chr 1:113,759,419...113,788,490
Ensembl chr 1:113,759,423...113,788,447 		JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:7,169,664...7,208,890
Ensembl chr10:7,168,007...7,208,899 		JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:1,877,672...1,893,097
Ensembl chr22:1,871,181...1,910,055 		JBrowse link
G TSC1 TSC complex subunit 1 ISO RGD PMID:23435171 RGD:10448950 NCBI chr 9:51,409,307...51,459,546
Ensembl chr 9:51,425,937...51,454,677 		JBrowse link
G TSC2 TSC complex subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20453062) Ensembl
MGI		 PMID:20453062 GO_REF:0000107 NCBI chr 6:38,865,509...38,898,977
Ensembl chr 6:38,865,507...38,898,960 		JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chr 2:17,504,949...17,588,037 JBrowse link
G WDR24 WD repeat domain 24 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:39,887,968...39,891,633
Ensembl chr 6:39,887,667...39,891,588 		JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:42,903,815...43,073,918
Ensembl chr18:42,932,513...43,072,827 		JBrowse link
G CERS1 ceramide synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,216,568...44,231,820 JBrowse link
G DELE1 DAP3 binding cell death enhancer 1 involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chr 2:36,865,275...36,880,304
Ensembl chr 2:36,865,289...36,879,840 		JBrowse link
G EIF2AK1 eukaryotic translation initiation factor 2 alpha kinase 1 involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chr 6:11,447,225...11,478,611
Ensembl chr 6:11,447,081...11,478,658 		JBrowse link
G FBXO7 F-box protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:30,928,059...30,948,858
Ensembl chr10:30,928,329...30,948,977 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
G LOC481473 immunity-related GTPase family M protein involved_in ISO (PMID:21102437), (PMID:32939830) UniProt PMID:21102437 PMID:32939830 NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617 		JBrowse link
G LOC606863 immunity-related GTPase family M protein-like involved_in ISO (MGI:6705154|PMID:33510463) UniProt PMID:33510463 MGI:6705154 NCBI chr11:506,981...523,338
Ensembl chr11:509,636...510,829 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:64,636,850...64,667,232
Ensembl chr 2:64,635,519...64,667,232 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA		 RGD
Ensembl		 PMID:28608965 GO_REF:0000107 RGD:13432560 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764 		JBrowse link
G SLC25A4 solute carrier family 25 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,454,660...45,458,606
Ensembl chr16:45,411,810...45,542,162 		JBrowse link
G SLC25A5 solute carrier family 25 member 5 involved_in ISO (MGI:6407583|PMID:31618756) UniProt PMID:31618756 MGI:6407583 NCBI chr  X:91,523,649...91,526,447
Ensembl chr  X:91,523,643...91,526,479 		JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:29934347 UniProt PMID:29934347 RGD:405650300 NCBI chr 6:39,893,492...39,895,385
Ensembl chr 6:39,893,670...39,897,573 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in ISO (PMID:23685073) UniProt PMID:23685073 NCBI chr  X:91,608,936...91,617,993
Ensembl chr  X:91,529,855...91,617,086 		JBrowse link
G VPS13D vacuolar protein sorting 13 homolog D involved_in ISO (PMID:29307555) UniProt PMID:29307555 NCBI chr 2:83,898,620...84,132,453
Ensembl chr 2:83,901,018...84,132,529 		JBrowse link
positive regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VDAC1 voltage dependent anion channel 1 involved_in ISO (PMID:32047033) UniProt PMID:32047033 NCBI chr11:22,197,814...22,212,924
Ensembl chr11:22,197,949...22,212,924 		JBrowse link
positive regulation of reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 involved_in ISO (PMID:32851973)
(PMID:36543799)		 UniProt PMID:32851973 PMID:36543799 NCBI chr 9:24,276,660...24,286,273
Ensembl chr 9:24,276,768...24,286,272 		JBrowse link
G DDRGK1 DDRGK domain containing 1 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chr24:18,085,865...18,098,868
Ensembl chr24:18,084,725...18,097,157 		JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chr12:54,988,200...55,023,414
Ensembl chr12:54,988,264...55,021,626 		JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRF9 interferon regulatory factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,152,146...4,157,201 JBrowse link
G LOC481473 immunity-related GTPase family M protein involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chr11:793,416...795,373
Ensembl chr11:793,424...794,617 		JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,855,576...55,894,915
Ensembl chr 9:55,856,091...55,894,488 		JBrowse link
G MAPK3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425 		JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22033934) Ensembl
MGI		 PMID:22033934 GO_REF:0000107 NCBI chr14:43,162,671...43,226,948
Ensembl chr14:43,163,571...43,227,103 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22033934) Ensembl
MGI		 PMID:22033934 GO_REF:0000107 NCBI chr 2:64,636,850...64,667,232
Ensembl chr 2:64,635,519...64,667,232 		JBrowse link
G OPTN optineurin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:23,356,471...23,390,569
Ensembl chr 2:23,357,237...23,392,511 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22033934) Ensembl
MGI		 PMID:22033934 GO_REF:0000107 NCBI chr29:35,283,209...35,311,608
Ensembl chr29:35,282,072...35,311,333 		JBrowse link
G RNF31 ring finger protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,141,501...4,151,999 JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:7,169,664...7,208,890
Ensembl chr10:7,168,007...7,208,899 		JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chr15:51,454,557...51,465,429
Ensembl chr15:51,454,695...51,465,241 		JBrowse link
regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG12 autophagy related 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,531,062...5,543,034
Ensembl chr11:5,531,759...5,542,743 		JBrowse link
G ATG5 autophagy related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485 		JBrowse link
G CLEC16A C-type lectin domain containing 16A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:31,560,940...31,757,100
Ensembl chr 6:31,562,834...31,757,678 		JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:18,252,543...18,266,033
Ensembl chr 6:18,254,139...18,266,033 		JBrowse link
G TBC1D25 TBC1 domain family member 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:41,782,774...41,799,083
Ensembl chr  X:41,782,671...41,798,828 		JBrowse link
G TECPR1 tectonin beta-propeller repeat containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,086,498...11,112,236
Ensembl chr 6:11,086,423...11,112,241 		JBrowse link
regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFAP glial fibrillary acidic protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:18,569,868...18,579,463
Ensembl chr 9:18,569,892...18,579,461 		JBrowse link
regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG14 autophagy related 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:31,199,097...31,234,200
Ensembl chr 8:31,201,709...31,234,217 		JBrowse link
G ATP13A2 ATPase cation transporting 13A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:81,196,355...81,215,736
Ensembl chr 2:81,196,463...81,215,689 		JBrowse link
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,422,144...20,486,459
Ensembl chr 9:20,423,373...20,484,328 		JBrowse link
G BECN1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236 		JBrowse link
G HDAC6 histone deacetylase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,004,268...42,024,726
Ensembl chr  X:42,004,591...42,024,427 		JBrowse link
G LOC119877912 beclin-1 involved_in IEA Ensembl GO_REF:0000107
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,663,381...48,800,350
Ensembl chr 7:48,663,381...48,800,437 		JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:27,902,500...27,973,609
Ensembl chr23:27,902,840...27,971,892 		JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:52,809,792...52,855,072
Ensembl chr 5:52,815,609...52,876,609 		JBrowse link
G UBQLN1 ubiquilin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:75,767,345...75,812,278
Ensembl chr 1:75,767,188...75,838,051 		JBrowse link
G UBQLN2 ubiquilin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:47,860,923...47,864,282 JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY10 adenylate cyclase 10 ISO RGD PMID:31172217 RGD:329403053 NCBI chr 7:30,576,445...30,660,926
Ensembl chr 7:30,577,591...30,660,926 		JBrowse link
G BNIP3L BCL2 interacting protein 3 like involved_in ISO (MGI:5616312|PMID:20200478) ParkinsonsUK-UCL PMID:20200478 MGI:5616312 NCBI chr25:31,133,512...31,149,750
Ensembl chr25:31,136,168...31,148,905 		JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 2:58,361,328...58,441,701
Ensembl chr 2:58,360,838...58,432,371 		JBrowse link
G CTTN cortactin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:47,932,367...47,960,732
Ensembl chr18:47,916,632...47,960,674 		JBrowse link
G DNM1L dynamin 1 like involved_in ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:50,187,579...50,417,188
Ensembl chr15:50,189,240...50,417,195 		JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,494,856...44,504,084
Ensembl chr20:44,489,219...44,598,497 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567 		JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,129,116...112,138,714
Ensembl chr 1:112,103,825...112,138,559 		JBrowse link
G PARL presenilin associated rhomboid like involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:16,790,049...16,837,557
Ensembl chr34:16,781,139...16,837,545 		JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:41,663,809...41,686,764
Ensembl chr 5:41,663,773...41,686,776 		JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr10:23,451,923...23,532,765
Ensembl chr10:23,452,561...23,518,689
Ensembl chr10:23,452,561...23,518,689 		JBrowse link
G USP36 ubiquitin specific peptidase 36 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 9:2,547,316...2,587,360
Ensembl chr 9:2,550,452...2,585,108 		JBrowse link
G VDAC1 voltage dependent anion channel 1 involved_in ISO (MGI:5689082|PMID:25470454) ParkinsonsUK-UCL PMID:25470454 MGI:5689082 NCBI chr11:22,197,814...22,212,924
Ensembl chr11:22,197,949...22,212,924 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17924
    cellular process 16927
      process utilizing autophagic mechanism 522
        autophagy 522
          regulation of autophagy 311
            negative regulation of autophagy + 85
            positive regulation of autophagy + 165
            regulation of autophagy of mitochondrion + 39
            regulation of chaperone-mediated autophagy + 4
            regulation of macroautophagy + 146
            regulation of microlipophagy 0
Path 2
Term Annotations click to browse term
  biological_process 17924
    biological regulation 12446
      regulation of biological process 12082
        regulation of cellular process 11572
          regulation of cellular metabolic process 5783
            regulation of cellular catabolic process 419
              regulation of autophagy 311
                negative regulation of autophagy + 85
                positive regulation of autophagy + 165
                regulation of autophagy of mitochondrion + 39
                regulation of chaperone-mediated autophagy + 4
                regulation of macroautophagy + 146
                regulation of microlipophagy 0
paths to the root