PLEKHF1 (pleckstrin homology and FYVE domain containing 1) - Rat Genome Database

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Gene: PLEKHF1 (pleckstrin homology and FYVE domain containing 1) Canis lupus familiaris
Analyze
Symbol: PLEKHF1
Name: pleckstrin homology and FYVE domain containing 1
RGD ID: 40908931
Description: ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN positive regulation of intrinsic apoptotic signaling pathway (ortholog); protein localization to plasma membrane (ortholog); vesicle organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); Ovarian Neoplasms (ortholog); FOUND IN endosome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: pleckstrin homology domain-containing family F member 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11121,776,122 - 121,802,881 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1121,781,181 - 121,782,578 (-)NCBICanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1121,781,181 - 121,782,578 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.01122,402,959 - 122,431,800 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1122,409,980 - 122,411,377 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11121,982,589 - 122,011,226 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01121,595,581 - 121,618,885 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01122,654,118 - 122,682,943 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
early endosome  (IEA)
endosome  (ISO)
lysosome  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PLEKHF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11121,776,122 - 121,802,881 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1121,781,181 - 121,782,578 (-)NCBICanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1121,781,181 - 121,782,578 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.01122,402,959 - 122,431,800 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1122,409,980 - 122,411,377 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11121,982,589 - 122,011,226 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01121,595,581 - 121,618,885 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01122,654,118 - 122,682,943 (-)NCBIUU_Cfam_GSD_1.0
PLEKHF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381929,665,461 - 29,675,477 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1929,665,459 - 29,675,477 (+)EnsemblGRCh38hg38GRCh38
GRCh371930,156,368 - 30,166,384 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361934,848,167 - 34,858,224 (+)NCBINCBI36Build 36hg18NCBI36
Build 341934,847,802 - 34,858,204NCBI
Celera1926,854,527 - 26,864,585 (+)NCBICelera
Cytogenetic Map19q12NCBI
HuRef1926,668,787 - 26,678,845 (+)NCBIHuRef
CHM1_11930,157,659 - 30,167,716 (+)NCBICHM1_1
T2T-CHM13v2.01932,191,180 - 32,201,225 (+)NCBIT2T-CHM13v2.0
Plekhf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39737,920,078 - 37,927,418 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl737,916,396 - 37,927,440 (-)EnsemblGRCm39 Ensembl
GRCm38738,220,654 - 38,227,994 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl738,216,972 - 38,228,016 (-)EnsemblGRCm38mm10GRCm38
MGSCv37739,005,673 - 39,013,013 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36737,929,761 - 37,937,047 (-)NCBIMGSCv36mm8
Celera733,384,111 - 33,391,399 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map725.36NCBI
Plekhf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81100,045,340 - 100,046,817 (-)NCBIGRCr8
mRatBN7.2190,908,304 - 90,915,862 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl190,904,742 - 90,915,820 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx196,304,107 - 96,305,583 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01104,769,821 - 104,771,297 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0198,062,634 - 98,064,111 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0194,609,041 - 94,616,565 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl194,609,377 - 94,610,854 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0195,700,153 - 95,707,361 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4190,697,260 - 90,698,737 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1190,775,372 - 90,776,840 (-)NCBI
Celera185,240,535 - 85,242,012 (-)NCBICelera
Cytogenetic Map1q21NCBI
Plekhf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554687,934,024 - 7,943,499 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554687,934,024 - 7,943,499 (-)NCBIChiLan1.0ChiLan1.0
PLEKHF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22035,646,442 - 35,656,852 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11937,643,651 - 37,653,763 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01926,593,833 - 26,604,514 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11935,354,315 - 35,364,366 (+)NCBIpanpan1.1PanPan1.1panPan2
Plekhf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093495,976,223 - 5,987,835 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365705,658,052 - 5,666,358 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365705,658,052 - 5,666,711 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLEKHF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl639,786,199 - 39,797,583 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1639,786,201 - 39,797,578 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2635,145,695 - 35,157,120 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PLEKHF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1624,732,774 - 24,743,636 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl624,742,024 - 24,742,863 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660732,264,800 - 2,275,582 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plekhf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247944,843,635 - 4,852,346 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247944,843,342 - 4,852,346 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PLEKHF1
1197 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038468730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005321208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005321209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005321210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005321211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005354824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005354825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005354826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005354827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005422374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005422375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005422376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005422377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005422378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAAHUQ010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000012193   ⟹   ENSCAFP00000011302
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1121,781,181 - 121,782,578 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845002016   ⟹   ENSCAFP00845001582
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1122,409,980 - 122,411,377 (-)Ensembl
RefSeq Acc Id: XM_038468730   ⟹   XP_038324658
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,996,951 (-)NCBI
RefSeq Acc Id: XM_038468731   ⟹   XP_038324659
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,996,579 (-)NCBI
RefSeq Acc Id: XM_038468732   ⟹   XP_038324660
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,999,352 (-)NCBI
RefSeq Acc Id: XM_038468733   ⟹   XP_038324661
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,999,352 (-)NCBI
RefSeq Acc Id: XM_038468734   ⟹   XP_038324662
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,995,513 (-)NCBI
RefSeq Acc Id: XM_038468735   ⟹   XP_038324663
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 122,011,226 (-)NCBI
RefSeq Acc Id: XM_038468736   ⟹   XP_038324664
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 122,007,188 (-)NCBI
RefSeq Acc Id: XM_038468737   ⟹   XP_038324665
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,997,634 (-)NCBI
RefSeq Acc Id: XM_038468738   ⟹   XP_038324666
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,995,555 (-)NCBI
RefSeq Acc Id: XM_038468739   ⟹   XP_038324667
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,998,400 (-)NCBI
RefSeq Acc Id: XM_038468740   ⟹   XP_038324668
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,996,951 (-)NCBI
RefSeq Acc Id: XM_038468741   ⟹   XP_038324669
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,989,072 - 121,996,934 (-)NCBI
RefSeq Acc Id: XM_038529539   ⟹   XP_038385467
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,668,506 (-)NCBI
RefSeq Acc Id: XM_038529540   ⟹   XP_038385468
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,668,136 (-)NCBI
RefSeq Acc Id: XM_038529541   ⟹   XP_038385469
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,671,014 (-)NCBI
RefSeq Acc Id: XM_038529542   ⟹   XP_038385470
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,671,014 (-)NCBI
RefSeq Acc Id: XM_038529543   ⟹   XP_038385471
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,667,035 (-)NCBI
RefSeq Acc Id: XM_038529544   ⟹   XP_038385472
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,682,943 (-)NCBI
RefSeq Acc Id: XM_038529545   ⟹   XP_038385473
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,678,872 (-)NCBI
RefSeq Acc Id: XM_038529546   ⟹   XP_038385474
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,669,265 (-)NCBI
RefSeq Acc Id: XM_038529547   ⟹   XP_038385475
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,667,075 (-)NCBI
RefSeq Acc Id: XM_038529548   ⟹   XP_038385476
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,670,035 (-)NCBI
RefSeq Acc Id: XM_038529549   ⟹   XP_038385477
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,660,546 - 122,663,511 (-)NCBI
RefSeq Acc Id: XM_038593780   ⟹   XP_038449708
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,603,496 (-)NCBI
RefSeq Acc Id: XM_038593781   ⟹   XP_038449709
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,603,071 (-)NCBI
RefSeq Acc Id: XM_038593782   ⟹   XP_038449710
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,606,999 (-)NCBI
RefSeq Acc Id: XM_038593783   ⟹   XP_038449711
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,606,999 (-)NCBI
RefSeq Acc Id: XM_038593784   ⟹   XP_038449712
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,602,056 (-)NCBI
RefSeq Acc Id: XM_038593785   ⟹   XP_038449713
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,618,885 (-)NCBI
RefSeq Acc Id: XM_038593786   ⟹   XP_038449714
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,614,837 (-)NCBI
RefSeq Acc Id: XM_038593787   ⟹   XP_038449715
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,605,258 (-)NCBI
RefSeq Acc Id: XM_038593788   ⟹   XP_038449716
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,602,098 (-)NCBI
RefSeq Acc Id: XM_038593789   ⟹   XP_038449717
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,606,026 (-)NCBI
RefSeq Acc Id: XM_038593790   ⟹   XP_038449718
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,601,864 (-)NCBI
RefSeq Acc Id: XM_038593791   ⟹   XP_038449719
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01121,595,581 - 121,603,496 (-)NCBI
RefSeq Acc Id: XM_038657662   ⟹   XP_038513590
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,417,341 (-)NCBI
RefSeq Acc Id: XM_038657663   ⟹   XP_038513591
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,416,968 (-)NCBI
RefSeq Acc Id: XM_038657664   ⟹   XP_038513592
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,419,902 (-)NCBI
RefSeq Acc Id: XM_038657665   ⟹   XP_038513593
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,419,902 (-)NCBI
RefSeq Acc Id: XM_038657667   ⟹   XP_038513595
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,415,894 (-)NCBI
RefSeq Acc Id: XM_038657668   ⟹   XP_038513596
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,431,800 (-)NCBI
RefSeq Acc Id: XM_038657669   ⟹   XP_038513597
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,427,758 (-)NCBI
RefSeq Acc Id: XM_038657670   ⟹   XP_038513598
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,418,160 (-)NCBI
RefSeq Acc Id: XM_038657671   ⟹   XP_038513599
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,415,936 (-)NCBI
RefSeq Acc Id: XM_038657672   ⟹   XP_038513600
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,418,928 (-)NCBI
RefSeq Acc Id: XM_038657673   ⟹   XP_038513601
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,415,385 (-)NCBI
RefSeq Acc Id: XM_038657674   ⟹   XP_038513602
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,417,341 (-)NCBI
RefSeq Acc Id: XM_038657675   ⟹   XP_038513603
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,409,417 - 122,417,324 (-)NCBI
RefSeq Acc Id: XR_005321208
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,982,589 - 121,996,951 (-)NCBI
RefSeq Acc Id: XR_005321209
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,982,589 - 121,996,951 (-)NCBI
RefSeq Acc Id: XR_005321210
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,987,033 - 121,996,951 (-)NCBI
RefSeq Acc Id: XR_005321211
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11121,986,100 - 121,996,951 (-)NCBI
RefSeq Acc Id: XR_005354824
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,655,609 - 122,668,506 (-)NCBI
RefSeq Acc Id: XR_005354825
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,654,919 - 122,668,506 (-)NCBI
RefSeq Acc Id: XR_005354826
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,654,118 - 122,668,506 (-)NCBI
RefSeq Acc Id: XR_005354827
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01122,657,578 - 122,668,506 (-)NCBI
RefSeq Acc Id: XR_005422374
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,404,504 - 122,417,341 (-)NCBI
RefSeq Acc Id: XR_005422375
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,402,959 - 122,417,341 (-)NCBI
RefSeq Acc Id: XR_005422376
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,403,004 - 122,417,341 (-)NCBI
RefSeq Acc Id: XR_005422377
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,407,377 - 122,417,341 (-)NCBI
RefSeq Acc Id: XR_005422378
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01122,406,521 - 122,417,341 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038324658 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324659 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324660 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324661 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324662 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324663 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324664 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324665 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324666 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324667 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324668 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324669 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385467 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385468 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385470 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385472 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385473 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385474 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385475 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385476 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385477 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449708 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449709 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449710 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449711 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449712 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449713 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449714 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449715 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449716 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449717 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449718 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449719 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513590 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513591 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513592 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513593 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513595 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513596 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513597 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513598 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513599 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513600 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513601 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513602 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513603 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00845001582.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000011302   ⟸   ENSCAFT00000012193
RefSeq Acc Id: XP_038324663   ⟸   XM_038468735
RefSeq Acc Id: XP_038324664   ⟸   XM_038468736
RefSeq Acc Id: XP_038324661   ⟸   XM_038468733
RefSeq Acc Id: XP_038324660   ⟸   XM_038468732
RefSeq Acc Id: XP_038324667   ⟸   XM_038468739
RefSeq Acc Id: XP_038324665   ⟸   XM_038468737
RefSeq Acc Id: XP_038324658   ⟸   XM_038468730
RefSeq Acc Id: XP_038324668   ⟸   XM_038468740
RefSeq Acc Id: XP_038324669   ⟸   XM_038468741
RefSeq Acc Id: XP_038324659   ⟸   XM_038468731
RefSeq Acc Id: XP_038324666   ⟸   XM_038468738
RefSeq Acc Id: XP_038324662   ⟸   XM_038468734
RefSeq Acc Id: XP_038449713   ⟸   XM_038593785
RefSeq Acc Id: XP_038449714   ⟸   XM_038593786
RefSeq Acc Id: XP_038449711   ⟸   XM_038593783
RefSeq Acc Id: XP_038449710   ⟸   XM_038593782
RefSeq Acc Id: XP_038449717   ⟸   XM_038593789
RefSeq Acc Id: XP_038449715   ⟸   XM_038593787
RefSeq Acc Id: XP_038449708   ⟸   XM_038593780
RefSeq Acc Id: XP_038449719   ⟸   XM_038593791
RefSeq Acc Id: XP_038449709   ⟸   XM_038593781
RefSeq Acc Id: XP_038449716   ⟸   XM_038593788
RefSeq Acc Id: XP_038449712   ⟸   XM_038593784
RefSeq Acc Id: XP_038449718   ⟸   XM_038593790
RefSeq Acc Id: XP_038513596   ⟸   XM_038657668
RefSeq Acc Id: XP_038513597   ⟸   XM_038657669
RefSeq Acc Id: XP_038513593   ⟸   XM_038657665
RefSeq Acc Id: XP_038513592   ⟸   XM_038657664
RefSeq Acc Id: XP_038513600   ⟸   XM_038657672
RefSeq Acc Id: XP_038513598   ⟸   XM_038657670
RefSeq Acc Id: XP_038513590   ⟸   XM_038657662
RefSeq Acc Id: XP_038513602   ⟸   XM_038657674
RefSeq Acc Id: XP_038513603   ⟸   XM_038657675
RefSeq Acc Id: XP_038513591   ⟸   XM_038657663
RefSeq Acc Id: XP_038513599   ⟸   XM_038657671
RefSeq Acc Id: XP_038513595   ⟸   XM_038657667
RefSeq Acc Id: XP_038513601   ⟸   XM_038657673
RefSeq Acc Id: XP_038385472   ⟸   XM_038529544
RefSeq Acc Id: XP_038385473   ⟸   XM_038529545
RefSeq Acc Id: XP_038385470   ⟸   XM_038529542
RefSeq Acc Id: XP_038385469   ⟸   XM_038529541
RefSeq Acc Id: XP_038385476   ⟸   XM_038529548
RefSeq Acc Id: XP_038385474   ⟸   XM_038529546
RefSeq Acc Id: XP_038385467   ⟸   XM_038529539
RefSeq Acc Id: XP_038385468   ⟸   XM_038529540
RefSeq Acc Id: XP_038385475   ⟸   XM_038529547
RefSeq Acc Id: XP_038385471   ⟸   XM_038529543
RefSeq Acc Id: XP_038385477   ⟸   XM_038529549
RefSeq Acc Id: ENSCAFP00845001582   ⟸   ENSCAFT00845002016
Protein Domains
FYVE-type   PH


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000007627 Ensembl
  ENSCAFG00845001176 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845002016.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro PH-like_dom_sf UniProtKB/TrEMBL
  PH_domain UniProtKB/TrEMBL
  PH_Phafin UniProtKB/TrEMBL
  Znf_FYVE UniProtKB/TrEMBL
  Znf_FYVE-rel UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene PLEKHF1 ENTREZGENE
PANTHER PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 1 UniProtKB/TrEMBL
  PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED UniProtKB/TrEMBL
Pfam FYVE UniProtKB/TrEMBL
  PF00169 UniProtKB/TrEMBL
PROSITE PH_DOMAIN UniProtKB/TrEMBL
  ZF_FYVE UniProtKB/TrEMBL
SMART FYVE UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF57903 UniProtKB/TrEMBL
UniProt A0A8I3RRB2_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:44675 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-14 PLEKHF1  pleckstrin homology and FYVE domain containing 1  PLEKHF1  pleckstrin homology and FYVE domain containing 1  Data merged from RGD:12401769 737654 PROVISIONAL