WDR45 (WD repeat domain 45) - Rat Genome Database

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Gene: WDR45 (WD repeat domain 45) Canis lupus familiaris
Analyze
Symbol: WDR45 (Ensembl: PRAF2)
Name: WD repeat domain 45
RGD ID: 12312067
Description: ENCODES a protein that exhibits lipid binding (inferred); phosphatidylinositol phosphate binding (inferred); phosphatidylinositol-3,5-bisphosphate binding (inferred); INVOLVED IN autophagosome assembly (inferred); autophagy (inferred); cellular response to starvation (inferred); ASSOCIATED WITH autistic disorder (ortholog); CEREBRAL-CEREBELLAR-COLOBOMA SYNDROME, X-LINKED (ortholog); congenital disorder of glycosylation type IIm (ortholog); FOUND IN cytosol (inferred); extrinsic component of membrane (inferred); phagophore assembly site (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: WD repeat domain phosphoinositide-interacting protein 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X42,221,261 - 42,237,535 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX42,218,046 - 42,226,422 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX16,596,869 - 16,613,180 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X42,357,475 - 42,373,725 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX42,357,480 - 42,363,342 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X42,343,804 - 42,360,115 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X42,331,450 - 42,347,770 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X42,426,205 - 42,442,519 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
WDR45
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X42,221,261 - 42,237,535 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX42,218,046 - 42,226,422 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX16,596,869 - 16,613,180 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X42,357,475 - 42,373,725 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX42,357,480 - 42,363,342 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X42,343,804 - 42,360,115 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X42,331,450 - 42,347,770 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X42,426,205 - 42,442,519 (-)NCBIUU_Cfam_GSD_1.0
WDR45
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X49,074,442 - 49,101,178 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX49,074,433 - 49,101,170 (-)EnsemblGRCh38hg38GRCh38
GRCh37X48,932,101 - 48,958,116 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X48,819,036 - 48,845,003 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X48,688,548 - 48,714,308NCBI
CeleraX52,706,432 - 52,732,399 (+)NCBICelera
Cytogenetic MapXp11.23NCBI
HuRefX46,588,725 - 46,614,834 (-)NCBIHuRef
CHM1_1X48,963,413 - 48,989,776 (-)NCBICHM1_1
T2T-CHM13v2.0X48,486,169 - 48,512,926 (-)NCBIT2T-CHM13v2.0
Wdr45
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X7,588,212 - 7,594,439 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX7,580,572 - 7,594,445 (+)EnsemblGRCm39 Ensembl
GRCm38X7,721,987 - 7,728,201 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX7,714,333 - 7,728,206 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X7,299,375 - 7,305,327 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X6,879,208 - 6,885,160 (+)NCBIMGSCv36mm8
CeleraX3,742,357 - 3,748,359 (-)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX3.48NCBI
Wdr45
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X17,448,195 - 17,454,117 (-)NCBIGRCr8
mRatBN7.2X14,776,280 - 14,782,202 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX14,776,293 - 14,782,202 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX19,590,311 - 19,596,220 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X20,486,896 - 20,492,805 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X16,752,063 - 16,757,972 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X15,621,249 - 15,627,159 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX15,621,209 - 15,627,235 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X16,402,686 - 16,408,439 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X26,816,610 - 26,822,245 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X26,870,079 - 26,875,714 (-)NCBI
CeleraX14,860,493 - 14,866,128 (-)NCBICelera
Cytogenetic MapXq12NCBI
Wdr45
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955543597,814 - 603,963 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955543597,796 - 604,163 (-)NCBIChiLan1.0ChiLan1.0
WDR45
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X50,564,448 - 50,592,163 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X50,567,827 - 50,595,542 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X41,372,722 - 41,400,441 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X49,228,153 - 49,233,960 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX49,224,864 - 49,233,960 (-)Ensemblpanpan1.1panPan2
Wdr45
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X34,734,724 - 34,740,594 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936721975,104 - 981,731 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936721975,113 - 981,149 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WDR45
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX43,147,477 - 43,156,234 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X43,150,691 - 43,155,981 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X47,998,631 - 48,003,934 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WDR45
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X46,183,278 - 46,188,564 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX46,183,443 - 46,188,536 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607611,748,609 - 11,754,464 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wdr45
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624893845,701 - 852,244 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624893845,689 - 852,221 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in WDR45
69 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005641345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005641346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005641347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005641348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022415833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_858796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000025005   ⟹   ENSCAFP00000023205
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX42,218,621 - 42,220,774 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000025015   ⟹   ENSCAFP00000023215
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX42,221,261 - 42,226,422 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000064463   ⟹   ENSCAFP00000054294
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX42,221,261 - 42,224,890 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000078656   ⟹   ENSCAFP00000047734
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX42,221,261 - 42,224,890 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000083837   ⟹   ENSCAFP00000054878
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX42,221,221 - 42,226,422 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000084095   ⟹   ENSCAFP00000061258
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX42,218,046 - 42,226,422 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000084323   ⟹   ENSCAFP00000065499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX42,221,638 - 42,226,422 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000090441   ⟹   ENSCAFP00000052109
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX42,221,261 - 42,225,164 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845055174   ⟹   ENSCAFP00845043391
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 EnsemblX42,357,480 - 42,363,342 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845055179   ⟹   ENSCAFP00845043395
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 EnsemblX42,357,480 - 42,362,708 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845055180   ⟹   ENSCAFP00845043396
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 EnsemblX42,357,480 - 42,362,708 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845055181   ⟹   ENSCAFP00845043397
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 EnsemblX42,357,523 - 42,362,716 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845055182   ⟹   ENSCAFP00845043398
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 EnsemblX42,357,892 - 42,362,719 (-)Ensembl
RefSeq Acc Id: XM_005641345   ⟹   XP_005641402
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X42,221,261 - 42,226,494 (-)NCBI
Dog10K_Boxer_TashaX16,596,869 - 16,602,142 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005641346   ⟹   XP_005641403
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X42,221,261 - 42,226,476 (-)NCBI
Dog10K_Boxer_TashaX16,596,869 - 16,602,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005641347   ⟹   XP_005641404
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X42,221,261 - 42,226,556 (-)NCBI
Dog10K_Boxer_TashaX16,596,869 - 16,602,133 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005641348   ⟹   XP_005641405
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X42,221,261 - 42,226,494 (-)NCBI
Dog10K_Boxer_TashaX16,596,869 - 16,602,142 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022415833   ⟹   XP_022271541
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X42,221,261 - 42,237,535 (-)NCBI
Dog10K_Boxer_TashaX16,596,869 - 16,613,180 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038449991   ⟹   XP_038305919
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X42,357,475 - 42,362,748 (-)NCBI
RefSeq Acc Id: XM_038449992   ⟹   XP_038305920
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X42,357,475 - 42,362,730 (-)NCBI
RefSeq Acc Id: XM_038449993   ⟹   XP_038305921
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X42,357,475 - 42,362,739 (-)NCBI
RefSeq Acc Id: XM_038449994   ⟹   XP_038305922
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X42,357,475 - 42,373,725 (-)NCBI
RefSeq Acc Id: XM_038449995   ⟹   XP_038305923
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X42,357,475 - 42,362,748 (-)NCBI
RefSeq Acc Id: XM_038449996   ⟹   XP_038305924
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X42,357,475 - 42,362,748 (-)NCBI
RefSeq Acc Id: XM_038523441   ⟹   XP_038379369
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X42,343,804 - 42,349,077 (-)NCBI
RefSeq Acc Id: XM_038523442   ⟹   XP_038379370
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X42,343,804 - 42,349,059 (-)NCBI
RefSeq Acc Id: XM_038523443   ⟹   XP_038379371
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X42,343,804 - 42,349,068 (-)NCBI
RefSeq Acc Id: XM_038523444   ⟹   XP_038379372
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X42,343,804 - 42,360,115 (-)NCBI
RefSeq Acc Id: XM_038523445   ⟹   XP_038379373
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X42,343,804 - 42,349,077 (-)NCBI
RefSeq Acc Id: XM_038523446   ⟹   XP_038379374
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X42,343,804 - 42,349,077 (-)NCBI
RefSeq Acc Id: XM_038587413   ⟹   XP_038443341
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X42,426,205 - 42,431,478 (-)NCBI
RefSeq Acc Id: XM_038587414   ⟹   XP_038443342
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X42,426,205 - 42,431,460 (-)NCBI
RefSeq Acc Id: XM_038587415   ⟹   XP_038443343
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X42,426,205 - 42,431,469 (-)NCBI
RefSeq Acc Id: XM_038587416   ⟹   XP_038443344
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X42,426,205 - 42,442,519 (-)NCBI
RefSeq Acc Id: XM_038587417   ⟹   XP_038443345
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X42,426,205 - 42,431,478 (-)NCBI
RefSeq Acc Id: XM_038587418   ⟹   XP_038443346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X42,426,205 - 42,431,478 (-)NCBI
RefSeq Acc Id: XM_038651922   ⟹   XP_038507850
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X42,331,450 - 42,336,723 (-)NCBI
RefSeq Acc Id: XM_038651923   ⟹   XP_038507851
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X42,331,450 - 42,336,705 (-)NCBI
RefSeq Acc Id: XM_038651924   ⟹   XP_038507852
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X42,331,450 - 42,336,714 (-)NCBI
RefSeq Acc Id: XM_038651925   ⟹   XP_038507853
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X42,331,450 - 42,347,770 (-)NCBI
RefSeq Acc Id: XM_038651926   ⟹   XP_038507854
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X42,331,450 - 42,336,723 (-)NCBI
RefSeq Acc Id: XM_038651927   ⟹   XP_038507855
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X42,331,450 - 42,336,723 (-)NCBI
RefSeq Acc Id: XM_858796   ⟹   XP_863889
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X42,221,261 - 42,226,494 (-)NCBI
Dog10K_Boxer_TashaX16,596,869 - 16,602,142 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005641402 (Get FASTA)   NCBI Sequence Viewer  
  XP_005641403 (Get FASTA)   NCBI Sequence Viewer  
  XP_005641404 (Get FASTA)   NCBI Sequence Viewer  
  XP_005641405 (Get FASTA)   NCBI Sequence Viewer  
  XP_022271541 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305919 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305920 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305921 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305922 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305923 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305924 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379369 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379370 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379371 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379372 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379373 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379374 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443341 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443342 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443343 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443344 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443345 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443346 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507850 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507851 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507852 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507853 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507854 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507855 (Get FASTA)   NCBI Sequence Viewer  
  XP_863889 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000023215.5
  ENSCAFP00000047734.2
  ENSCAFP00000054294.2
  ENSCAFP00000054878.2
  ENSCAFP00000065499.2
  ENSCAFP00040018287.1
  ENSCAFP00040018378.1
  ENSCAFP00040018518.1
  ENSCAFP00040018579.1
  ENSCAFP00845043391
  ENSCAFP00845043391.1
  ENSCAFP00845043395
  ENSCAFP00845043395.1
  ENSCAFP00845043396.1
  ENSCAFP00845043397
  ENSCAFP00845043397.1
  ENSCAFP00845043398.1
RefSeq Acc Id: XP_005641404   ⟸   XM_005641347
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_863889   ⟸   XM_858796
- Peptide Label: isoform X2
- UniProtKB: A0A8C0L7V0 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005641402   ⟸   XM_005641345
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005641405   ⟸   XM_005641348
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SAQ9 (UniProtKB/TrEMBL),   A0A8I3QQM5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005641403   ⟸   XM_005641346
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022271541   ⟸   XM_022415833
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000047734   ⟸   ENSCAFT00000078656
RefSeq Acc Id: ENSCAFP00000023205   ⟸   ENSCAFT00000025005
RefSeq Acc Id: ENSCAFP00000023215   ⟸   ENSCAFT00000025015
RefSeq Acc Id: ENSCAFP00000054294   ⟸   ENSCAFT00000064463
RefSeq Acc Id: ENSCAFP00000065499   ⟸   ENSCAFT00000084323
RefSeq Acc Id: ENSCAFP00000061258   ⟸   ENSCAFT00000084095
RefSeq Acc Id: ENSCAFP00000054878   ⟸   ENSCAFT00000083837
RefSeq Acc Id: ENSCAFP00000052109   ⟸   ENSCAFT00000090441
RefSeq Acc Id: XP_038379372   ⟸   XM_038523444
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038379374   ⟸   XM_038523446
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038379373   ⟸   XM_038523445
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038379369   ⟸   XM_038523441
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038379371   ⟸   XM_038523443
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038379370   ⟸   XM_038523442
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038507853   ⟸   XM_038651925
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038507855   ⟸   XM_038651927
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038507854   ⟸   XM_038651926
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038507850   ⟸   XM_038651922
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038507852   ⟸   XM_038651924
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038507851   ⟸   XM_038651923
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038305922   ⟸   XM_038449994
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038305924   ⟸   XM_038449996
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SAQ9 (UniProtKB/TrEMBL),   A0A8I3QQM5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038305923   ⟸   XM_038449995
- Peptide Label: isoform X2
- UniProtKB: A0A8C0L7V0 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038305919   ⟸   XM_038449991
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038305921   ⟸   XM_038449993
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038305920   ⟸   XM_038449992
- Peptide Label: isoform X1
- UniProtKB: A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443344   ⟸   XM_038587416
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL),   A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443346   ⟸   XM_038587418
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SAQ9 (UniProtKB/TrEMBL),   A0A8I3QQM5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443345   ⟸   XM_038587417
- Peptide Label: isoform X2
- UniProtKB: A0A8C0L7V0 (UniProtKB/TrEMBL),   A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443341   ⟸   XM_038587413
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL),   A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443343   ⟸   XM_038587415
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL),   A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038443342   ⟸   XM_038587414
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SA48 (UniProtKB/TrEMBL),   A0A8C0SAP5 (UniProtKB/TrEMBL),   A0A8I3QCJ3 (UniProtKB/TrEMBL),   A0A8I3QDN4 (UniProtKB/TrEMBL),   A0A8P0NXR4 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845043396   ⟸   ENSCAFT00845055180
RefSeq Acc Id: ENSCAFP00845043398   ⟸   ENSCAFT00845055182
RefSeq Acc Id: ENSCAFP00845043391   ⟸   ENSCAFT00845055174
RefSeq Acc Id: ENSCAFP00845043397   ⟸   ENSCAFT00845055181
RefSeq Acc Id: ENSCAFP00845043395   ⟸   ENSCAFT00845055179


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000015785 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040011254 UniProtKB/TrEMBL
  ENSCAFG00845031037 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000025015.5 UniProtKB/TrEMBL
  ENSCAFT00000064463.2 UniProtKB/TrEMBL
  ENSCAFT00000078656.2 UniProtKB/TrEMBL
  ENSCAFT00000083837.2 UniProtKB/TrEMBL
  ENSCAFT00000084323.2 UniProtKB/TrEMBL
  ENSCAFT00040021063.1 UniProtKB/TrEMBL
  ENSCAFT00040021174.1 UniProtKB/TrEMBL
  ENSCAFT00040021324.1 UniProtKB/TrEMBL
  ENSCAFT00040021393.1 UniProtKB/TrEMBL
  ENSCAFT00845055174 ENTREZGENE
  ENSCAFT00845055174.1 UniProtKB/TrEMBL
  ENSCAFT00845055179 ENTREZGENE
  ENSCAFT00845055179.1 UniProtKB/TrEMBL
  ENSCAFT00845055180.1 UniProtKB/TrEMBL
  ENSCAFT00845055181 ENTREZGENE
  ENSCAFT00845055181.1 UniProtKB/TrEMBL
  ENSCAFT00845055182.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
InterPro PROPPIN UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
NCBI Gene WDR45 ENTREZGENE
PANTHER WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 4 UniProtKB/TrEMBL
  WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED UniProtKB/TrEMBL
Pfam PROPPIN UniProtKB/TrEMBL
SMART WD40 UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/TrEMBL
UniProt A0A8C0L7V0 ENTREZGENE
  A0A8C0SA48 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SAP5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SAQ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SAS4_CANLF UniProtKB/TrEMBL
  A0A8I3Q658_CANLF UniProtKB/TrEMBL
  A0A8I3Q8H8_CANLF UniProtKB/TrEMBL
  A0A8I3QCJ3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3QDN4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3QQM5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NXR4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T763_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:54611 ENTREZGENE