TSC1 (TSC complex subunit 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: TSC1 (TSC complex subunit 1) Canis lupus familiaris
Analyze
Symbol: TSC1
Name: TSC complex subunit 1
RGD ID: 12288464
Description: ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); chaperone binding (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); adaptive immune response (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell projection (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: chromosome 9 TSC1; hamartin; tuberous sclerosis 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1951,409,307 - 51,459,546 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl951,425,937 - 51,454,677 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha950,673,940 - 50,724,548 (+)NCBI
ROS_Cfam_1.0952,304,134 - 52,354,724 (+)NCBI
UMICH_Zoey_3.1951,082,516 - 51,133,112 (+)NCBI
UNSW_CanFamBas_1.0951,407,015 - 51,457,594 (+)NCBI
UU_Cfam_GSD_1.0951,486,514 - 51,537,117 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activation of GTPase activity  (ISO)
adaptive immune response  (ISO)
adult locomotory behavior  (ISO)
cardiac muscle cell differentiation  (ISO)
cell projection organization  (ISO)
cell-matrix adhesion  (ISO)
cellular response to oxygen-glucose deprivation  (ISO)
cerebral cortex development  (ISO)
glucose import  (ISO)
hippocampus development  (ISO)
kidney development  (ISO)
memory T cell differentiation  (ISO)
myelination  (ISO)
negative regulation of ATPase activity  (ISO)
negative regulation of cell population proliferation  (ISO)
negative regulation of cell size  (ISO)
negative regulation of GTPase activity  (ISO)
negative regulation of macroautophagy  (ISO)
negative regulation of neuron projection development  (ISO)
negative regulation of oxidative stress-induced neuron death  (ISO)
negative regulation of TOR signaling  (ISO)
negative regulation of translation  (ISO)
nervous system development  (ISO)
neural tube closure  (ISO)
positive regulation of focal adhesion assembly  (ISO)
positive regulation of macroautophagy  (ISO)
positive regulation of stress fiber assembly  (ISO)
potassium ion transport  (ISO)
protein stabilization  (ISO)
regulation of cell-matrix adhesion  (ISO)
regulation of focal adhesion assembly  (ISO)
regulation of neuron death  (ISO)
regulation of phosphoprotein phosphatase activity  (ISO)
regulation of protein kinase activity  (ISO)
regulation of stress fiber assembly  (ISO)
regulation of translation  (ISO)
response to insulin  (ISO)
response to nutrient levels  (ISO)
response to peptide  (ISO)
rRNA export from nucleus  (ISO)
synapse organization  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:10759551  


Genomics

Comparative Map Data
TSC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1951,409,307 - 51,459,546 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl951,425,937 - 51,454,677 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha950,673,940 - 50,724,548 (+)NCBI
ROS_Cfam_1.0952,304,134 - 52,354,724 (+)NCBI
UMICH_Zoey_3.1951,082,516 - 51,133,112 (+)NCBI
UNSW_CanFamBas_1.0951,407,015 - 51,457,594 (+)NCBI
UU_Cfam_GSD_1.0951,486,514 - 51,537,117 (+)NCBI
TSC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9132,891,348 - 132,946,874 (-)EnsemblGRCh38hg38GRCh38
GRCh389132,891,349 - 132,945,269 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh379135,766,736 - 135,820,003 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369134,756,557 - 134,809,841 (-)NCBINCBI36hg18NCBI36
Build 349132,815,940 - 132,849,574NCBI
Celera9106,308,473 - 106,361,761 (-)NCBI
Cytogenetic Map9q34.13NCBI
HuRef9105,260,658 - 105,313,711 (-)NCBIHuRef
CHM1_19135,917,213 - 135,970,447 (-)NCBICHM1_1
Tsc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39228,531,005 - 28,581,184 (+)NCBIGRCm39mm39
GRCm39 Ensembl228,531,240 - 28,581,179 (+)Ensembl
GRCm38228,640,993 - 28,691,172 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl228,641,228 - 28,691,167 (+)EnsemblGRCm38mm10GRCm38
MGSCv37228,496,763 - 28,546,687 (+)NCBIGRCm37mm9NCBIm37
MGSCv36228,463,252 - 28,513,176 (+)NCBImm8
Celera228,345,749 - 28,395,673 (+)NCBICelera
Cytogenetic Map2A3NCBI
Tsc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2311,969,547 - 12,018,591 (+)NCBI
Rnor_6.0 Ensembl37,237,192 - 7,265,145 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.037,219,955 - 7,269,063 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0312,570,765 - 12,619,753 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.437,645,313 - 7,672,944 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.137,645,612 - 7,673,244 (+)NCBI
Celera36,767,562 - 6,795,193 (+)NCBICelera
Cytogenetic Map3p12NCBI
Tsc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555132,197,037 - 2,244,992 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555132,197,037 - 2,244,992 (-)NCBIChiLan1.0ChiLan1.0
TSC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19132,638,003 - 132,692,264 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9132,638,003 - 132,675,759 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v09104,007,708 - 104,060,938 (-)NCBIMhudiblu_PPA_v0panPan3
Tsc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947199,562,656 - 199,618,374 (-)NCBI
SpeTri2.0NW_00493648719,331,183 - 19,386,841 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TSC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1272,636,532 - 272,685,952 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11272,636,530 - 272,685,948 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21306,795,196 - 306,819,962 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TSC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1125,195,604 - 5,249,042 (+)NCBI
ChlSab1.1 Ensembl125,195,675 - 5,244,157 (+)Ensembl
Vero_WHO_p1.0NW_02366607910,396,791 - 10,450,324 (-)NCBI
Tsc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247603,479,028 - 3,536,612 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 16 2 5 1 12 8 10 1
Low 5 5 6 6 4 6 1 5 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022423653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038678153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_537808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF201838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000031635   ⟹   ENSCAFP00000029451
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl951,425,937 - 51,454,677 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000037901   ⟹   ENSCAFP00000033542
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl951,425,937 - 51,454,677 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000072310   ⟹   ENSCAFP00000045098
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl951,425,937 - 51,442,338 (+)Ensembl
RefSeq Acc Id: XM_022423653   ⟹   XP_022279361
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,409,307 - 51,459,546 (+)NCBI
Dog10K_Boxer_Tasha950,674,549 - 50,724,548 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423654   ⟹   XP_022279362
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,409,354 - 51,459,546 (+)NCBI
Dog10K_Boxer_Tasha950,674,593 - 50,724,548 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423655   ⟹   XP_022279363
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,410,442 - 51,459,546 (+)NCBI
Dog10K_Boxer_Tasha950,675,456 - 50,724,548 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423656   ⟹   XP_022279364
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,409,317 - 51,459,546 (+)NCBI
Dog10K_Boxer_Tasha950,674,529 - 50,724,548 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038487035   ⟹   XP_038342963
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,083,083 - 51,133,112 (+)NCBI
RefSeq Acc Id: XM_038487036   ⟹   XP_038342964
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,083,102 - 51,133,112 (+)NCBI
RefSeq Acc Id: XM_038487037   ⟹   XP_038342965
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,083,146 - 51,133,112 (+)NCBI
RefSeq Acc Id: XM_038487039   ⟹   XP_038342967
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,084,011 - 51,133,112 (+)NCBI
RefSeq Acc Id: XM_038487040   ⟹   XP_038342968
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,082,516 - 51,133,112 (+)NCBI
RefSeq Acc Id: XM_038487041   ⟹   XP_038342969
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,083,083 - 51,133,112 (+)NCBI
RefSeq Acc Id: XM_038487042   ⟹   XP_038342970
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1951,083,082 - 51,133,112 (+)NCBI
RefSeq Acc Id: XM_038548889   ⟹   XP_038404817
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,487,104 - 51,537,117 (+)NCBI
RefSeq Acc Id: XM_038548890   ⟹   XP_038404818
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,487,123 - 51,537,117 (+)NCBI
RefSeq Acc Id: XM_038548892   ⟹   XP_038404820
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,487,167 - 51,537,117 (+)NCBI
RefSeq Acc Id: XM_038548893   ⟹   XP_038404821
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,488,016 - 51,537,117 (+)NCBI
RefSeq Acc Id: XM_038548894   ⟹   XP_038404822
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,486,514 - 51,537,117 (+)NCBI
RefSeq Acc Id: XM_038548895   ⟹   XP_038404823
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,487,104 - 51,537,117 (+)NCBI
RefSeq Acc Id: XM_038548896   ⟹   XP_038404824
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0951,487,103 - 51,537,117 (+)NCBI
RefSeq Acc Id: XM_038612841   ⟹   XP_038468769
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,407,582 - 51,457,594 (+)NCBI
RefSeq Acc Id: XM_038612842   ⟹   XP_038468770
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,407,601 - 51,457,594 (+)NCBI
RefSeq Acc Id: XM_038612843   ⟹   XP_038468771
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,407,645 - 51,457,594 (+)NCBI
RefSeq Acc Id: XM_038612844   ⟹   XP_038468772
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,408,497 - 51,457,594 (+)NCBI
RefSeq Acc Id: XM_038612845   ⟹   XP_038468773
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,407,015 - 51,457,594 (+)NCBI
RefSeq Acc Id: XM_038612846   ⟹   XP_038468774
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,407,582 - 51,457,594 (+)NCBI
RefSeq Acc Id: XM_038612847   ⟹   XP_038468775
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0951,407,581 - 51,457,594 (+)NCBI
RefSeq Acc Id: XM_038616004   ⟹   XP_038471932
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha950,673,940 - 50,724,548 (+)NCBI
RefSeq Acc Id: XM_038616011   ⟹   XP_038471939
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha950,674,530 - 50,724,548 (+)NCBI
RefSeq Acc Id: XM_038678146   ⟹   XP_038534074
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,304,701 - 52,354,724 (+)NCBI
RefSeq Acc Id: XM_038678147   ⟹   XP_038534075
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,304,720 - 52,354,724 (+)NCBI
RefSeq Acc Id: XM_038678148   ⟹   XP_038534076
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,304,764 - 52,354,724 (+)NCBI
RefSeq Acc Id: XM_038678149   ⟹   XP_038534077
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,305,629 - 52,354,724 (+)NCBI
RefSeq Acc Id: XM_038678151   ⟹   XP_038534079
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,304,134 - 52,354,724 (+)NCBI
RefSeq Acc Id: XM_038678152   ⟹   XP_038534080
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,304,701 - 52,354,724 (+)NCBI
RefSeq Acc Id: XM_038678153   ⟹   XP_038534081
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0952,304,700 - 52,354,724 (+)NCBI
RefSeq Acc Id: XM_537808   ⟹   XP_537808
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1951,409,317 - 51,459,546 (+)NCBI
Dog10K_Boxer_Tasha950,674,530 - 50,724,548 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_022279361 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279362 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279363 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279364 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342963 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342964 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342965 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342967 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342968 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342969 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342970 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404817 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404818 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404820 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404821 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404822 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404823 (Get FASTA)   NCBI Sequence Viewer  
  XP_038404824 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468769 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468770 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468771 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468772 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468773 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468774 (Get FASTA)   NCBI Sequence Viewer  
  XP_038468775 (Get FASTA)   NCBI Sequence Viewer  
  XP_038471932 (Get FASTA)   NCBI Sequence Viewer  
  XP_038471939 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534074 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534075 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534076 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534077 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534079 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534080 (Get FASTA)   NCBI Sequence Viewer  
  XP_038534081 (Get FASTA)   NCBI Sequence Viewer  
  XP_537808 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_537808   ⟸   XM_537808
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022279361   ⟸   XM_022423653
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022279364   ⟸   XM_022423656
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022279362   ⟸   XM_022423654
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022279363   ⟸   XM_022423655
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSCAFP00000033542   ⟸   ENSCAFT00000037901
RefSeq Acc Id: ENSCAFP00000045098   ⟸   ENSCAFT00000072310
RefSeq Acc Id: ENSCAFP00000029451   ⟸   ENSCAFT00000031635
RefSeq Acc Id: XP_038342968   ⟸   XM_038487040
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342970   ⟸   XM_038487042
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038342969   ⟸   XM_038487041
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342963   ⟸   XM_038487035
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342964   ⟸   XM_038487036
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342965   ⟸   XM_038487037
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342967   ⟸   XM_038487039
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038468773   ⟸   XM_038612845
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038468775   ⟸   XM_038612847
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038468774   ⟸   XM_038612846
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038468769   ⟸   XM_038612841
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038468770   ⟸   XM_038612842
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038468771   ⟸   XM_038612843
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038468772   ⟸   XM_038612844
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038534079   ⟸   XM_038678151
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038534081   ⟸   XM_038678153
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038534080   ⟸   XM_038678152
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038534074   ⟸   XM_038678146
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038534075   ⟸   XM_038678147
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038534076   ⟸   XM_038678148
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038534077   ⟸   XM_038678149
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038471932   ⟸   XM_038616004
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038471939   ⟸   XM_038616011
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038404822   ⟸   XM_038548894
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038404824   ⟸   XM_038548896
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038404823   ⟸   XM_038548895
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038404817   ⟸   XM_038548889
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038404818   ⟸   XM_038548890
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038404820   ⟸   XM_038548892
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038404821   ⟸   XM_038548893
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019882 Ensembl, ENTREZGENE
Ensembl Protein ENSCAFP00000029451 ENTREZGENE
NCBI Gene TSC1 ENTREZGENE
VGNC ID VGNC:47890 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-07-04 TSC1  TSC complex subunit 1    tuberous sclerosis 1  Symbol and/or name change 5135510 APPROVED