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ONTOLOGY REPORT - ANNOTATIONS

Term:endoplasmic reticulum-Golgi intermediate compartment
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Accession:GO:0005793 term browser browse the term
Definition:A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi and Golgi-to-ER transport.
Synonyms:exact_synonym: EGTC;   ER-Golgi intermediate compartment;   ER-Golgi transport container;   ERGIC;   VTC;   endoplasmic reticulum-Golgi transport container;   pre-Golgi intermediate compartment;   vesicular-tubular cluster
 xref: Wikipedia:Vesicular-tubular_cluster
 only_in_taxon: NCBITaxon:2759 ! Eukaryota


show annotations for term's descendants           Sort by:
endoplasmic reticulum-Golgi intermediate compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07035218.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr12:5,901,586...5,978,565 JBrowse link
G Anpep alanyl aminopeptidase, membrane located_in ISO
IEA		 (PMID:15308636)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308636 GO_REF:0000107 NCBI chr 1:143,176,645...143,219,447
Ensembl chr 1:133,767,332...133,785,789 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:190,457,198...190,475,410
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Car4 carbonic anhydrase 4 located_in ISO (PMID:17409381) RGD PMID:17409381 NCBI chr10:70,325,102...70,333,916
Ensembl chr10:69,827,945...69,836,501 		JBrowse link
G Ccdc115 coiled-coil domain containing 115 located_in ISO (PMID:26833332) RGD PMID:26833332 NCBI chr 9:44,146,287...44,150,250
Ensembl chr 9:36,649,271...36,653,946 		JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:126,989,800...127,025,071
Ensembl chr 3:106,536,004...106,571,251 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein located_in ISO
ISS		 (PMID:10861296)
GO_REF:0000024		 RGD
UniProt		 PMID:10861296 GO_REF:0000024 NCBI chr16:81,451,941...81,462,046
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Cnih4 cornichon family member 4 located_in ISO (PMID:24405750) RGD PMID:24405750 NCBI chr13:95,442,054...95,458,163
Ensembl chr13:92,910,315...92,927,853 		JBrowse link
G Copb1 COPI coat complex subunit beta 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:177,838,751...177,876,688
Ensembl chr 1:168,404,335...168,438,416 		JBrowse link
G Copg1 COPI coat complex subunit gamma 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:121,923,644...121,949,819
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Copg2 COPI coat complex subunit gamma 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:60,333,455...60,468,953
Ensembl chr 4:59,366,086...59,501,618 		JBrowse link
G Dicer1 dicer 1 ribonuclease III IDA RGD PMID:17888888 RGD:2311247 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G ENSRNOG00000069701 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 1:113,862,509...113,864,525 JBrowse link
G Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr10:17,035,615...17,131,411
Ensembl chr10:16,531,194...16,626,957 		JBrowse link
G Ergic2 ERGIC and golgi 2 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr 4:182,822,225...182,858,392
Ensembl chr 4:181,090,808...181,123,060 		JBrowse link
G Erp44 endoplasmic reticulum protein 44 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr 5:67,313,245...67,406,207
Ensembl chr 5:62,516,551...62,610,761 		JBrowse link
G Fn1 fibronectin 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:15308636)		 Ensembl
RGD		 PMID:15308636 GO_REF:0000107 NCBI chr 9:80,645,507...80,714,200
Ensembl chr 9:73,196,044...73,264,678 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase located_in IDA PMID:9837973 BHF-UCL PMID:9837973 RGD:70743 NCBI chr20:12,054,710...12,068,219
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 located_in ISO (PMID:12047556) RGD PMID:12047556 NCBI chr 1:254,959,784...255,088,479
Ensembl chr 1:245,018,568...245,147,042 		JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 located_in ISO (PMID:10777580) RGD PMID:10777580 NCBI chr15:21,076,129...21,088,526
Ensembl chr15:18,596,442...18,608,739 		JBrowse link
G Golga3 golgin A3 located_in ISO (PMID:12036294) RGD PMID:12036294 NCBI chr12:52,112,129...52,160,311
Ensembl chr12:46,454,870...46,500,509
Ensembl chr 4:46,454,870...46,500,509 		JBrowse link
G Golgb1 golgin B1 located_in
is_active_in		 ISO
IBA		 (PMID:15308636)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 GO_REF:0000033 NCBI chr11:77,348,573...77,406,165
Ensembl chr11:63,843,986...63,900,770 		JBrowse link
G Hmgb1 high mobility group box 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:11,009,236...11,015,941
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:112,467,960...112,469,220
Ensembl chr  X:107,671,272...107,672,535 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 located_in ISO
IEA		 (PMID:15308636)
(PMID:21187406)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308636 PMID:21187406 GO_REF:0000107 NCBI chr 3:38,453,016...38,457,475
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
G Ist1 IST1 factor associated with ESCRT-III located_in ISO
IEA		 (PMID:10942595)
GO_REF:0000107		 RGD
Ensembl		 PMID:10942595 GO_REF:0000107 NCBI chr19:54,558,353...54,580,551
Ensembl chr19:37,648,095...37,670,956 		JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr 1:105,483,598...105,494,587
Ensembl chr 1:96,347,150...96,358,157 		JBrowse link
G Lman1 lectin, mannose-binding, 1 located_in
is_active_in		 TAS
ISO
IBA
IDA
IEA		 (PMID:14645249), (PMID:14728599), (PMID:15452145), (PMID:21187406), (PMID:25208654)
GO_REF:0000033
PMID:19474315
GO_REF:0000107
(PMID:15308636), (PMID:21525244)		 RGD
GO_Central
Ensembl		 PMID:14645249 PMID:14728599 PMID:15308636 PMID:15452145 PMID:21187406 More... GO_REF:0000033 GO_REF:0000107, RGD:727344, RGD:8554250, RGD:1600099 NCBI chr18:61,778,971...61,800,960
Ensembl chr18:59,508,996...59,530,851 		JBrowse link
G Lman1l lectin, mannose-binding, 1 like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:66,906,684...66,925,512
Ensembl chr 8:58,010,839...58,023,681 		JBrowse link
G Lman2 lectin, mannose-binding 2 located_in
is_active_in		 ISO
IBA		 (PMID:15308636), (PMID:20477988)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 PMID:20477988 GO_REF:0000033 NCBI chr17:9,274,362...9,294,950
Ensembl chr17:9,269,022...9,287,265 		JBrowse link
G Lman2l lectin, mannose-binding 2-like is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:46,157,596...46,181,151
Ensembl chr 9:38,661,712...38,685,337 		JBrowse link
G LOC134483981 high mobility group protein B1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:232,223,702...232,226,269
Ensembl chr 1:222,796,915...222,798,193 		JBrowse link
G LOC134485624 high mobility group protein B1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:152,634,059...152,634,929 JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:7774585)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:7774585 GO_REF:0000024 GO_REF:0000033 NCBI chr14:79,876,002...79,888,011
Ensembl chr14:75,651,376...75,665,414 		JBrowse link
G Man1a1 mannosidase, alpha, class 1A, member 1 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr20:33,745,158...33,928,584
Ensembl chr20:33,202,517...33,385,824 		JBrowse link
G Mcfd2 multiple coagulation factor deficiency 2, ER cargo receptor complex subunit located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:13,028,036...13,039,388
Ensembl chr 6:7,274,469...7,285,841 		JBrowse link
G Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:47,169,229...47,282,577
Ensembl chr 9:39,673,430...39,766,890 		JBrowse link
G Mgat4b alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:35,049,421...35,060,307
Ensembl chr10:34,549,433...34,559,229 		JBrowse link
G Mgat4d MGAT4 family, member D is_active_in
located_in		 IBA
ISO		 GO_REF:0000033
(PMID:20805325)		 GO_Central
RGD		 PMID:20805325 GO_REF:0000033 NCBI chr19:41,644,744...41,681,583
Ensembl chr19:24,740,078...24,777,012 		JBrowse link
G Mppe1 metallophosphoesterase 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:63,033,329...63,051,461
Ensembl chr18:60,763,419...60,781,553 		JBrowse link
G Mtmr6 myotubularin related protein 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:38,596,091...38,634,023
Ensembl chr15:34,419,903...34,457,861 		JBrowse link
G Nat8 N-acetyltransferase 8 located_in ISO (PMID:24556617) RGD PMID:24556617 NCBI chr 4:119,836,986...119,837,764
Ensembl chr 4:118,270,954...118,281,763 		JBrowse link
G Nat8b N-acetyltransferase 8B located_in ISO (PMID:24556617) RGD PMID:24556617 NCBI chr 4:119,916,909...119,923,544
Ensembl chr 4:118,359,443...118,363,563 		JBrowse link
G Nucb1 nucleobindin 1 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:15308636)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:15308636 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:105,104,793...105,135,730
Ensembl chr 1:95,968,326...96,003,220 		JBrowse link
G Nucb2 nucleobindin 2 located_in
is_active_in		 ISO
IBA		 (PMID:15308636)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 GO_REF:0000033 NCBI chr 1:180,185,121...180,221,644
Ensembl chr 1:170,750,877...170,787,353 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr10:106,335,300...106,346,911
Ensembl chr10:105,836,982...105,848,500 		JBrowse link
G Pdia6 protein disulfide isomerase family A, member 6 located_in TAS
IEA
ISO		 GO_REF:0000107
(PMID:15308636)		 Ensembl
RGD		 PMID:15308636 PMID:7876340 GO_REF:0000107, RGD:708601 NCBI chr 6:45,791,704...45,808,947
Ensembl chr 6:40,062,926...40,080,613 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:24556617) RGD PMID:24556617 NCBI chr14:71,202,303...71,307,008
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 located_in ISO
IEA
ISS		 (PMID:23006999)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23006999 GO_REF:0000024 GO_REF:0000107 NCBI chr18:63,498,890...63,564,571
Ensembl chr18:61,229,014...61,294,627 		JBrowse link
G Rab1b RAB1B, member RAS oncogene family located_in ISO (PMID:21187406) RGD PMID:21187406 NCBI chr 1:211,835,133...211,843,408
Ensembl chr 1:202,405,759...202,413,868
Ensembl chr  X:202,405,759...202,413,868 		JBrowse link
G Rab37 RAB37, member RAS oncogene family located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr10:100,833,240...100,900,950
Ensembl chr10:100,334,216...100,401,474 		JBrowse link
G Rer1 retention in endoplasmic reticulum sorting receptor 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:21187406)		 Ensembl
RGD		 PMID:21187406 GO_REF:0000107 NCBI chr 5:170,916,643...170,929,073
Ensembl chr 5:165,634,300...165,646,750 		JBrowse link
G Rgmb repulsive guidance molecule BMP co-receptor b located_in ISO (PMID:14749425) RGD PMID:14749425 NCBI chr 1:65,439,748...65,465,149
Ensembl chr 1:56,767,850...56,792,425 		JBrowse link
G Scyl1 SCY1 like pseudokinase 1 located_in ISS
ISO		 GO_REF:0000024
(PMID:18556652)		 UniProt
RGD		 PMID:18556652 GO_REF:0000024 NCBI chr 1:212,475,198...212,489,285
Ensembl chr 1:203,045,741...203,059,533 		JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr 2:188,188,783...188,209,565
Ensembl chr 2:185,500,004...185,522,026 		JBrowse link
G Serpinh1 serpin family H member 1 located_in ISO
IEA		 (PMID:15308636)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308636 GO_REF:0000107 NCBI chr 1:163,055,630...163,063,177
Ensembl chr 1:153,643,510...153,650,801 		JBrowse link
G Slc35c2 solute carrier family 35 member C2 located_in
is_active_in		 ISO
IBA
IDA		 (PMID:20837470)
GO_REF:0000033		 RGD
GO_Central		 PMID:20837470 PMID:20837470 GO_REF:0000033, RGD:8553345 NCBI chr 3:174,431,688...174,442,852
Ensembl chr 3:154,012,416...154,023,488 		JBrowse link
G Smo smoothened, frizzled class receptor located_in IEA
ISO		 GO_REF:0000107
(PMID:35353806)		 Ensembl
RGD		 PMID:35353806 GO_REF:0000107 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Stk17b serine/threonine kinase 17b located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:62,801,912...62,832,511
Ensembl chr 9:55,307,668...55,338,031 		JBrowse link
G Stx17 syntaxin 17 located_in IDA
ISO		 PMID:21545355
(PMID:23006999)		 RGD PMID:23006999 PMID:21545355 RGD:8553719 NCBI chr 5:67,241,673...67,302,228
Ensembl chr 5:62,446,187...62,504,451 		JBrowse link
G Surf4 surfeit 4 located_in ISO (PMID:15308636), (PMID:18287528) RGD PMID:15308636 PMID:18287528 NCBI chr 3:30,646,435...30,659,641
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Tmed1 transmembrane p24 trafficking protein 1 located_in
is_active_in		 ISO
IBA		 (PMID:12237308)
GO_REF:0000033		 RGD
GO_Central		 PMID:12237308 GO_REF:0000033 NCBI chr 8:28,336,072...28,342,853
Ensembl chr 8:20,059,892...20,063,677 		JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 located_in
is_active_in		 IDA
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:12237308), (PMID:32272059)		 Ensembl
GO_Central
RGD		 PMID:12237308 PMID:32272059 PMID:9914165 GO_REF:0000033 GO_REF:0000107, RGD:2317252 NCBI chr 6:110,722,887...110,757,743
Ensembl chr 6:104,991,838...105,026,753 		JBrowse link
G Tmed11 transmembrane emp24 protein transport domain containing 11 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:1,071,410...1,091,793
Ensembl chr14:927,001...947,321 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:12237308)
(PMID:30236446)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:12237308 PMID:30236446 GO_REF:0000024 GO_REF:0000033 NCBI chr12:37,713,522...37,722,606
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:12237308)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:12237308 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:99,121,361...99,129,653
Ensembl chr 8:90,241,516...90,249,346 		JBrowse link
G Tmed4 transmembrane p24 trafficking protein 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:85,338,980...85,343,577
Ensembl chr14:81,125,053...81,129,631 		JBrowse link
G Tmed5 transmembrane p24 trafficking protein 5 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:15308636), (PMID:19948005)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:15308636 PMID:19948005 GO_REF:0000024 GO_REF:0000033 NCBI chr14:1,752,857...1,763,990
Ensembl chr14:1,607,819...1,628,426 		JBrowse link
G Tmed6 transmembrane p24 trafficking protein 6 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:51,876,561...51,882,648
Ensembl chr19:34,966,813...34,972,900 		JBrowse link
G Tmed7 transmembrane p24 trafficking protein 7 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:10359607), (PMID:12237308)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:10359607 PMID:12237308 GO_REF:0000024 GO_REF:0000033 NCBI chr18:41,505,167...41,512,243
Ensembl chr18:39,297,351...39,325,640 		JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:12237308)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12237308 GO_REF:0000033 GO_REF:0000107 NCBI chr17:9,034,797...9,039,311
Ensembl chr17:9,029,646...9,034,176 		JBrowse link
G Trappc12 trafficking protein particle complex subunit 12 located_in ISO (PMID:21525244) RGD PMID:21525244 NCBI chr 6:51,049,878...51,115,343
Ensembl chr 6:45,321,497...45,386,952 		JBrowse link
G Trappc2b trafficking protein particle complex 2B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:36,439,185...36,443,432
Ensembl chr10:35,938,039...35,942,975 		JBrowse link
G Trip11 thyroid hormone receptor interactor 11 located_in ISO (PMID:25473115) RGD PMID:25473115 NCBI chr 6:126,760,263...126,832,619
Ensembl chr 6:120,998,733...121,067,781 		JBrowse link
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 located_in IDA PMID:11535823 UniProt PMID:11535823 RGD:8553934 NCBI chr 9:45,851,127...45,964,454
Ensembl chr 9:38,359,089...38,468,467 		JBrowse link
G Yif1a Yip1 interacting factor homolog A, membrane trafficking protein located_in
is_active_in		 ISO
IBA		 (PMID:15308636)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 GO_REF:0000033 NCBI chr 1:211,823,921...211,828,437
Ensembl chr 1:202,394,897...202,399,427 		JBrowse link
G Yif1b Yip1 interacting factor homolog B, membrane trafficking protein located_in
is_active_in		 IDA
ISO
IBA
IEA		 PMID:26077767
(PMID:26077767)
GO_REF:0000033
GO_REF:0000104
PMID:18685031		 RGD
GO_Central
UniProt		 PMID:26077767 PMID:26077767 PMID:18685031 GO_REF:0000033 GO_REF:0000104, RGD:11342577, RGD:21201278 NCBI chr 1:93,667,113...93,677,381
Ensembl chr 1:84,539,722...84,549,904 		JBrowse link
G Yipf7 Yip1 domain family, member 7 located_in ISO (PMID:25208654) RGD PMID:25208654 NCBI chr14:38,924,994...38,953,021
Ensembl chr14:38,571,066...38,599,055 		JBrowse link
endoplasmic reticulum-Golgi intermediate compartment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap1 ATPase H+ transporting accessory protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:157,231,243...157,238,323
Ensembl chr  X:152,079,865...152,087,034 		JBrowse link
G Azin2 antizyme inhibitor 2 located_in ISS
ISO		 GO_REF:0000024
(PMID:19449338)		 UniProt
RGD		 PMID:19449338 GO_REF:0000024 NCBI chr 5:146,568,187...146,594,777
Ensembl chr 5:141,281,249...141,310,397 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:81,451,941...81,462,046
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:17,035,615...17,131,411
Ensembl chr10:16,531,194...16,626,957 		JBrowse link
G Ergic2 ERGIC and golgi 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:182,822,225...182,858,392
Ensembl chr 4:181,090,808...181,123,060 		JBrowse link
G Ergic3 ERGIC and golgi 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:164,985,108...164,994,897
Ensembl chr 3:144,525,092...144,534,813 		JBrowse link
G Golga2 golgin A2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:35,981,783...36,002,023
Ensembl chr 3:15,584,039...15,604,279 		JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:105,483,598...105,494,587
Ensembl chr 1:96,347,150...96,358,157 		JBrowse link
G Lamp5 lysosomal-associated membrane protein family, member 5 located_in ISO
ISS		 (PMID:21642595)
GO_REF:0000024		 RGD
UniProt		 PMID:21642595 GO_REF:0000024 NCBI chr 3:143,825,197...143,837,699
Ensembl chr 3:123,372,462...123,384,952 		JBrowse link
G Lman1 lectin, mannose-binding, 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:61,778,971...61,800,960
Ensembl chr18:59,508,996...59,530,851 		JBrowse link
G Lman1l lectin, mannose-binding, 1 like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:66,906,684...66,925,512
Ensembl chr 8:58,010,839...58,023,681 		JBrowse link
G Mppe1 metallophosphoesterase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:63,033,329...63,051,461
Ensembl chr18:60,763,419...60,781,553 		JBrowse link
G Nat8 N-acetyltransferase 8 located_in ISS
ISO		 GO_REF:0000024
(PMID:19011241)		 UniProt
RGD		 PMID:19011241 GO_REF:0000024 NCBI chr 4:119,836,986...119,837,764
Ensembl chr 4:118,270,954...118,281,763 		JBrowse link
G Nat8b N-acetyltransferase 8B located_in ISO (PMID:19011241) RGD PMID:19011241 NCBI chr 4:119,916,909...119,923,544
Ensembl chr 4:118,359,443...118,363,563 		JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:67,453,120...67,515,347
Ensembl chr19:50,544,582...50,606,501 		JBrowse link
G Plpp3 phospholipid phosphatase 3 located_in ISO
IEA
ISS		 (PMID:23591818)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23591818 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:125,156,000...125,231,119
Ensembl chr 5:119,927,085...120,002,205 		JBrowse link
G Rab2a RAB2A, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:26,473,424...26,537,441
Ensembl chr 5:21,676,129...21,739,899 		JBrowse link
G Robo1 roundabout guidance receptor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203 		JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:188,188,783...188,209,565
Ensembl chr 2:185,500,004...185,522,026 		JBrowse link
G Sppl3 signal peptide peptidase like 3 located_in ISO (PMID:25384971) RGD PMID:25384971 NCBI chr12:47,176,317...47,260,756
Ensembl chr12:41,515,640...41,600,126 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000044
(PMID:37832545)
(PMID:32690950), (PMID:37832545)
(PMID:30842662)		 UniProt
RGD		 PMID:30842662 PMID:32690950 PMID:37832545 GO_REF:0000044 NCBI chr18:27,606,196...27,612,544
Ensembl chr18:27,332,119...27,338,335 		JBrowse link
G Stx17 syntaxin 17 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:67,241,673...67,302,228
Ensembl chr 5:62,446,187...62,504,451 		JBrowse link
G Stx5 syntaxin 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:215,066,532...215,082,685
Ensembl chr 1:205,637,413...205,653,563 		JBrowse link
G Surf1 SURF1, cytochrome c oxidase assembly factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:30,639,868...30,642,759
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Surf4 surfeit 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:30,646,435...30,659,641
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Tm6sf2 transmembrane 6 superfamily member 2 located_in
is_active_in		 ISO
ISS
IBA		 (PMID:24927523)
GO_REF:0000024
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:24927523 GO_REF:0000024 GO_REF:0000033 NCBI chr16:19,378,148...19,385,360
Ensembl chr16:19,344,222...19,351,431 		JBrowse link
G Tmed1 transmembrane p24 trafficking protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:28,336,072...28,342,853
Ensembl chr 8:20,059,892...20,063,677 		JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:110,722,887...110,757,743
Ensembl chr 6:104,991,838...105,026,753 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:37,713,522...37,722,606
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:99,121,361...99,129,653
Ensembl chr 8:90,241,516...90,249,346 		JBrowse link
G Tmed5 transmembrane p24 trafficking protein 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:1,752,857...1,763,990
Ensembl chr14:1,607,819...1,628,426 		JBrowse link
G Tmed7 transmembrane p24 trafficking protein 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:41,505,167...41,512,243
Ensembl chr18:39,297,351...39,325,640 		JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:9,034,797...9,039,311
Ensembl chr17:9,029,646...9,034,176 		JBrowse link
G Tmem199 transmembrane protein 199 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26833330)		 UniProt
Ensembl
RGD		 PMID:26833330 GO_REF:0000024 GO_REF:0000107 NCBI chr10:63,900,543...63,905,115
Ensembl chr10:63,402,494...63,407,108 		JBrowse link
G Vma21 vacuolar ATPase assembly factor VMA21 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:154,536,493...154,545,794
Ensembl chr  X:149,491,738...149,499,272 		JBrowse link
G Vmp1 vacuole membrane protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:71,903,223...72,002,337
Ensembl chr10:71,405,452...71,505,007 		JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B located_in ISO (PMID:21865173) RGD PMID:21865173 NCBI chr 7:68,436,996...69,013,574
Ensembl chr 7:66,558,471...67,128,429 		JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules located_in
is_active_in		 ISO
IBA		 (PMID:18614018)
GO_REF:0000033		 RGD
GO_Central		 PMID:18614018 GO_REF:0000033 NCBI chr 1:144,935,588...144,963,989
Ensembl chr 1:135,526,386...135,554,759 		JBrowse link
G Yif1b Yip1 interacting factor homolog B, membrane trafficking protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:93,667,113...93,677,381
Ensembl chr 1:84,539,722...84,549,904 		JBrowse link
TRAPPI protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trappc5 trafficking protein particle complex subunit 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:6,535,574...6,539,898
Ensembl chr12:1,737,627...1,742,637 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21329
    cellular anatomical structure 21034
      cytoplasm 12258
        endoplasmic reticulum-Golgi intermediate compartment 98
          TRAPPI protein complex 1
          endoplasmic reticulum-Golgi intermediate compartment membrane 39
Path 2
Term Annotations click to browse term
  cellular_component 21329
    cellular anatomical structure 21034
      organelle 14243
        membrane-bounded organelle 12808
          intracellular membrane-bounded organelle 12255
            endoplasmic reticulum-Golgi intermediate compartment 98
              TRAPPI protein complex 1
              endoplasmic reticulum-Golgi intermediate compartment membrane 39
paths to the root