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Gene: Scyl1 (SCY1 like pseudokinase 1) Rattus norvegicus
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Symbol: Scyl1
Name: SCY1 like pseudokinase 1
Description: Predicted to have ATP binding activity and protein kinase activity. Predicted to be involved in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to localize to the cytoplasm. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 21. Orthologous to human SCYL1 (SCY1 like pseudokinase 1); INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC293684; N-terminal kinase-like protein; SCY1-like 1 (S. cerevisiae); SCY1-like protein 1; SCY1-like, kinase-like 1
Orthologs:
Homo sapiens (human) : SCYL1 (SCY1 like pseudokinase 1)  HGNC  Alliance
Mus musculus (house mouse) : Scyl1 (SCY1-like 1 (S. cerevisiae))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Scyl1 (SCY1 like pseudokinase 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SCYL1 (SCY1 like pseudokinase 1)
Canis lupus familiaris (dog) : SCYL1 (SCY1 like pseudokinase 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Scyl1 (SCY1 like pseudokinase 1)
Sus scrofa (pig) : SCYL1 (SCY1 like pseudokinase 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01221,115,992 - 221,129,668 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01228,048,955 - 228,062,763 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41208,385,471 - 208,399,265 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11208,538,923 - 208,552,718 (-)NCBI
Celera1200,581,422 - 200,595,031 (-)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Scyl1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1307330
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.