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ONTOLOGY REPORT - ANNOTATIONS

Term:endoplasmic reticulum-Golgi intermediate compartment
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Accession:GO:0005793 term browser browse the term
Definition:A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi and Golgi-to-ER transport.
Synonyms:exact_synonym: EGTC;   ER-Golgi intermediate compartment;   ER-Golgi transport container;   ERGIC;   VTC;   endoplasmic reticulum-Golgi transport container;   pre-Golgi intermediate compartment;   vesicular-tubular cluster
 xref: Wikipedia:Vesicular-tubular_cluster
 only_in_taxon: NCBITaxon:2759 ! Eukaryota


show annotations for term's descendants           Sort by:
endoplasmic reticulum-Golgi intermediate compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025074.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr16:25,584,241...25,585,849 JBrowse link
G AABR07035218.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044
G AABR07059877.1 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 4:41,548,914...41,549,455 JBrowse link
G AC108595.1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr 7:122,951,378...122,953,062 JBrowse link
G Anpep alanyl aminopeptidase, membrane located_in ISO
IEA		 (PMID:15308636)
GO_REF:0000107		 RGD
Ensembl		 PMID:15308636 GO_REF:0000107 NCBI chr 1:133,767,332...133,810,137
Ensembl chr 1:133,767,332...133,785,789 		JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Car4 carbonic anhydrase 4 located_in ISO (PMID:17409381) RGD PMID:17409381 NCBI chr10:69,827,945...69,836,501
Ensembl chr10:69,827,945...69,836,501 		JBrowse link
G Ccdc115 coiled-coil domain containing 115 located_in ISO (PMID:26833332) RGD PMID:26833332 NCBI chr 9:36,650,384...36,654,348
Ensembl chr 9:36,649,271...36,653,946 		JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251 		JBrowse link
G Chp1l1 calcineurin-like EF-hand protein 1 like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:68,570,894...68,571,875
Ensembl chr 5:68,571,232...68,571,819 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein located_in ISO
ISS		 (PMID:10861296)
GO_REF:0000024		 RGD
UniProt		 PMID:10861296 GO_REF:0000024 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Cnih4 cornichon family member 4 located_in ISO (PMID:24405750) RGD PMID:24405750 NCBI chr13:92,910,315...92,926,428
Ensembl chr13:92,910,315...92,927,853 		JBrowse link
G Copb1 COPI coat complex subunit beta 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:168,404,334...168,438,589
Ensembl chr 1:168,404,335...168,438,416 		JBrowse link
G Copg1 COPI coat complex subunit gamma 1 located_in
is_active_in		 IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:120,366,540...120,392,502
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Copg2 COPI coat complex subunit gamma 2 located_in
is_active_in		 IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:59,366,086...59,501,591
Ensembl chr 4:59,366,086...59,501,618 		JBrowse link
G Dicer1 dicer 1 ribonuclease III IDA RGD PMID:17888888 RGD:2311247 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G ENSRNOG00000063632 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 Ensembl chr10:100,935,824...100,936,291 JBrowse link
G ENSRNOG00000069701 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 1:113,862,509...113,864,525 JBrowse link
G Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr10:16,531,192...16,626,974
Ensembl chr10:16,531,194...16,626,957 		JBrowse link
G Ergic2 ERGIC and golgi 2 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr 4:181,090,808...181,123,074
Ensembl chr 4:181,090,808...181,123,060 		JBrowse link
G Erp44 endoplasmic reticulum protein 44 located_in
is_active_in		 ISO
IBA		 (PMID:15308636)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 GO_REF:0000033 NCBI chr 5:62,516,550...62,610,762
Ensembl chr 5:62,516,551...62,610,761 		JBrowse link
G Fn1 fibronectin 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:15308636)		 Ensembl
RGD		 PMID:15308636 GO_REF:0000107 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase located_in IDA PMID:9837973 BHF-UCL PMID:9837973 RGD:70743 NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 located_in ISO (PMID:12047556) RGD PMID:12047556 NCBI chr 1:245,018,535...245,147,052
Ensembl chr 1:245,018,568...245,147,042 		JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 located_in ISO (PMID:10777580) RGD PMID:10777580 NCBI chr15:18,596,180...18,608,854
Ensembl chr15:18,596,442...18,608,739 		JBrowse link
G Golga3 golgin A3 located_in ISO (PMID:12036294) RGD PMID:12036294 NCBI chr12:46,452,409...46,500,509
Ensembl chr12:46,454,870...46,500,509 		JBrowse link
G Golgb1 golgin B1 located_in
is_active_in		 ISO
IBA		 (PMID:15308636)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 GO_REF:0000033 NCBI chr11:63,843,179...63,900,665
Ensembl chr11:63,843,986...63,900,770 		JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616 		JBrowse link
G Hmgb1 high mobility group box 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hmgb1-ps34 high mobility group box 1, pseudogene 34 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:71,363,531...71,364,791
Ensembl chr  X:71,363,531...71,364,790 		JBrowse link
G Hmgb1-ps8 high-mobility group box 1, pseudogene 8 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:34,028,487...34,030,715
Ensembl chr16:34,028,446...34,030,648 		JBrowse link
G Hmgb1l1 high mobility group box 1 like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:79,815,176...79,816,529
Ensembl chr 1:79,815,269...79,816,511 		JBrowse link
G Hmgb1l2 high mobility group box 1 like 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:107,671,273...107,672,015
Ensembl chr  X:107,671,272...107,672,535 		JBrowse link
G Hmgb1l5 high mobility group box 1 like 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:39,768,658...39,769,408
Ensembl chr10:39,768,658...39,769,293 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 located_in ISO
IEA		 (PMID:15308636)
GO_REF:0000107
(PMID:21187406)		 RGD
Ensembl		 PMID:15308636 PMID:21187406 GO_REF:0000107 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
G Ist1 IST1 factor associated with ESCRT-III located_in ISO
IEA		 (PMID:10942595)
GO_REF:0000107		 RGD
Ensembl		 PMID:10942595 GO_REF:0000107 NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956 		JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr 1:96,347,258...96,358,145
Ensembl chr 1:96,347,150...96,358,157 		JBrowse link
G Lman1 lectin, mannose-binding, 1 located_in
is_active_in		 TAS
ISO
IBA
IDA
IEA		 (PMID:14645249), (PMID:14728599), (PMID:15452145), (PMID:21187406), (PMID:25208654)
GO_REF:0000033
PMID:19474315
GO_REF:0000107
(PMID:15308636), (PMID:21525244)		 RGD
GO_Central
Ensembl		 PMID:14645249 PMID:14728599 PMID:15308636 PMID:15452145 PMID:21187406 More... GO_REF:0000033 GO_REF:0000107, RGD:727344, RGD:8554250, RGD:1600099 NCBI chr18:59,508,996...59,530,873
Ensembl chr18:59,508,996...59,530,851 		JBrowse link
G Lman1l lectin, mannose-binding, 1 like located_in
is_active_in		 IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:58,010,839...58,029,599
Ensembl chr 8:58,010,839...58,023,681 		JBrowse link
G Lman2 lectin, mannose-binding 2 located_in
is_active_in		 ISO
IBA		 (PMID:15308636), (PMID:20477988)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 PMID:20477988 GO_REF:0000033 NCBI chr17:9,269,236...9,286,923
Ensembl chr17:9,269,022...9,287,265 		JBrowse link
G Lman2l lectin, mannose-binding 2-like located_in
is_active_in		 IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:38,661,709...38,685,244
Ensembl chr 9:38,661,712...38,685,337 		JBrowse link
G LOC108350839 high mobility group protein B1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:91,306,902...91,309,095
Ensembl chr10:100,935,824...100,936,291 		JBrowse link
G LOC120102456 calcineurin B homologous protein 1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:9,947,312...9,949,851
Ensembl chr 4:9,947,317...9,949,797 		JBrowse link
G LOC134483981 high mobility group protein B1-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044
G Lrpap1 LDL receptor related protein associated protein 1 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:7774585)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:7774585 GO_REF:0000024 GO_REF:0000033 NCBI chr14:75,651,371...75,663,380
Ensembl chr14:75,651,376...75,665,414 		JBrowse link
G Man1a1 mannosidase, alpha, class 1A, member 1 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr20:33,202,509...33,385,747
Ensembl chr20:33,202,517...33,385,824 		JBrowse link
G Mcfd2 multiple coagulation factor deficiency 2, ER cargo receptor complex subunit located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:7,274,469...7,285,841
Ensembl chr 6:7,274,469...7,285,841 		JBrowse link
G Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A located_in
is_active_in		 IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:39,673,427...39,786,747
Ensembl chr 9:39,673,430...39,766,890 		JBrowse link
G Mgat4b alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:34,548,918...34,559,229
Ensembl chr10:34,549,433...34,559,229 		JBrowse link
G Mgat4d MGAT4 family, member D located_in
is_active_in		 ISO
IBA		 (MGI:5887193|PMID:20805325)
GO_REF:0000033		 RGD
GO_Central		 PMID:20805325 GO_REF:0000033 MGI:5887193 NCBI chr19:24,740,068...24,777,012
Ensembl chr19:24,740,078...24,777,012 		JBrowse link
G Mppe1 metallophosphoesterase 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:60,763,418...60,781,553
Ensembl chr18:60,763,419...60,781,553 		JBrowse link
G Mtmr6 myotubularin related protein 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:34,419,931...34,457,863
Ensembl chr15:34,419,903...34,457,861 		JBrowse link
G Nat8 N-acetyltransferase 8 located_in ISO (PMID:24556617) RGD PMID:24556617 NCBI chr 4:118,279,521...118,284,671
Ensembl chr 4:118,270,954...118,281,763 		JBrowse link
G Nat8b N-acetyltransferase 8B located_in ISO (PMID:24556617) RGD PMID:24556617 NCBI chr 4:118,359,445...118,364,351
Ensembl chr 4:118,359,443...118,363,563 		JBrowse link
G Nucb1 nucleobindin 1 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:15308636)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:15308636 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:95,968,325...95,999,183
Ensembl chr 1:95,968,326...96,003,220 		JBrowse link
G Nucb2 nucleobindin 2 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:15308636)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:15308636 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:170,750,830...170,787,356
Ensembl chr 1:170,750,877...170,787,353 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr10:105,836,972...105,848,583
Ensembl chr10:105,836,982...105,848,500 		JBrowse link
G Pdia6 protein disulfide isomerase family A, member 6 located_in TAS
IEA
ISO		 GO_REF:0000107
(PMID:15308636)		 Ensembl
RGD		 PMID:15308636 PMID:7876340 GO_REF:0000107, RGD:708601 NCBI chr 6:40,062,980...40,080,223
Ensembl chr 6:40,062,926...40,080,613 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:24556617) RGD PMID:24556617 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 located_in ISO
IEA
ISS		 (PMID:23006999)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:23006999 GO_REF:0000024 GO_REF:0000107 NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627 		JBrowse link
G Rab1b RAB1B, member RAS oncogene family located_in ISO (PMID:21187406) RGD PMID:21187406 NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
Ensembl chr  X:202,405,759...202,413,868 		JBrowse link
G Rab37 RAB37, member RAS oncogene family located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr10:100,334,639...100,401,974
Ensembl chr10:100,334,216...100,401,474 		JBrowse link
G Rer1 retention in endoplasmic reticulum sorting receptor 1 located_in IEA
ISO		 GO_REF:0000107
(PMID:21187406)		 Ensembl
RGD		 PMID:21187406 GO_REF:0000107 NCBI chr 5:165,634,567...165,646,643
Ensembl chr 5:165,634,300...165,646,750 		JBrowse link
G Rgmb repulsive guidance molecule BMP co-receptor b located_in ISO (PMID:14749425) RGD PMID:14749425 NCBI chr 1:56,766,598...56,792,396
Ensembl chr 1:56,767,850...56,792,425 		JBrowse link
G Scyl1 SCY1 like pseudokinase 1 located_in ISS
ISO		 GO_REF:0000024
(PMID:18556652)		 UniProt
RGD		 PMID:18556652 GO_REF:0000024 NCBI chr 1:203,045,776...203,059,550
Ensembl chr 1:203,045,741...203,059,533 		JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein located_in
is_active_in		 ISO
IBA		 (PMID:15308636)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 GO_REF:0000033 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026 		JBrowse link
G Serpinh1 serpin family H member 1 located_in ISO (PMID:15308636) RGD PMID:15308636 NCBI chr 1:153,643,500...153,650,853
Ensembl chr 1:153,643,510...153,650,801 		JBrowse link
G Slc35c2 solute carrier family 35 member C2 located_in
is_active_in		 ISO
IBA
IDA		 (PMID:20837470)
GO_REF:0000033		 RGD
GO_Central		 PMID:20837470 PMID:20837470 GO_REF:0000033, RGD:8553345 NCBI chr 3:154,012,262...154,023,549
Ensembl chr 3:154,012,416...154,023,488 		JBrowse link
G Smo smoothened, frizzled class receptor located_in IEA
ISO		 GO_REF:0000107
(PMID:35353806)		 Ensembl
RGD		 PMID:35353806 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Stk17b serine/threonine kinase 17b located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:55,307,485...55,338,085
Ensembl chr 9:55,307,668...55,338,031 		JBrowse link
G Stx17 syntaxin 17 located_in IDA
ISO		 PMID:21545355
(PMID:23006999)		 RGD PMID:23006999 PMID:21545355 RGD:8553719 NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451 		JBrowse link
G Surf1 SURF1, cytochrome c oxidase assembly factor is_active_in
located_in		 IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:10,241,793...10,244,686
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Surf4 surfeit 4 located_in
is_active_in		 ISO
IBA		 (PMID:15308636), (PMID:18287528)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 PMID:18287528 GO_REF:0000033 NCBI chr 3:10,248,360...10,261,537
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Tmed1 transmembrane p24 trafficking protein 1 located_in
is_active_in		 ISO
IBA		 (PMID:12237308)
GO_REF:0000033		 RGD
GO_Central		 PMID:12237308 GO_REF:0000033 NCBI chr 8:20,059,937...20,063,567
Ensembl chr 8:20,059,892...20,063,677 		JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 is_active_in
located_in		 IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(PMID:12237308), (PMID:32272059)		 GO_Central
TreeGrafter
Ensembl
RGD		 PMID:12237308 PMID:32272059 PMID:9914165 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118, RGD:2317252 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753 		JBrowse link
G Tmed11 transmembrane emp24 protein transport domain containing 11 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:926,983...947,574
Ensembl chr14:927,001...947,321 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:12237308)
(PMID:30236446)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:12237308 PMID:30236446 GO_REF:0000024 GO_REF:0000033 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:12237308)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:12237308 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:90,241,516...90,249,429
Ensembl chr 8:90,241,516...90,249,346 		JBrowse link
G Tmed4 transmembrane p24 trafficking protein 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:81,125,049...81,129,646
Ensembl chr14:81,125,053...81,129,631 		JBrowse link
G Tmed5 transmembrane p24 trafficking protein 5 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:15308636), (PMID:19948005)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:15308636 PMID:19948005 GO_REF:0000024 GO_REF:0000033 NCBI chr14:1,607,895...1,619,028
Ensembl chr14:1,607,819...1,628,426 		JBrowse link
G Tmed6 transmembrane p24 trafficking protein 6 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:34,966,813...34,972,900
Ensembl chr19:34,966,813...34,972,900 		JBrowse link
G Tmed7 transmembrane p24 trafficking protein 7 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:10359607), (PMID:12237308)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:10359607 PMID:12237308 GO_REF:0000024 GO_REF:0000033 NCBI chr18:39,318,564...39,325,640
Ensembl chr18:39,297,351...39,325,640 		JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 located_in
is_active_in		 ISO
IBA
IEA		 (PMID:12237308)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:12237308 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:9,029,646...9,034,160
Ensembl chr17:9,029,646...9,034,176 		JBrowse link
G Trappc12 trafficking protein particle complex subunit 12 located_in ISO (PMID:21525244) RGD PMID:21525244 NCBI chr 6:45,321,496...45,386,967
Ensembl chr 6:45,321,497...45,386,952 		JBrowse link
G Trappc2 trafficking protein particle complex subunit 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:28,004,051...28,015,336
Ensembl chr  X:27,994,054...28,015,346 		JBrowse link
G Trappc2b trafficking protein particle complex 2B located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:35,938,225...35,942,869
Ensembl chr10:35,938,039...35,942,975 		JBrowse link
G Trip11 thyroid hormone receptor interactor 11 located_in ISO (PMID:25473115) RGD PMID:25473115 NCBI chr 6:120,995,242...121,067,693
Ensembl chr 6:120,998,733...121,067,781 		JBrowse link
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 located_in IDA PMID:11535823 UniProt PMID:11535823 RGD:8553934 NCBI chr 9:38,355,229...38,468,473
Ensembl chr 9:38,359,089...38,468,467 		JBrowse link
G Yif1a Yip1 interacting factor homolog A, membrane trafficking protein located_in
is_active_in		 ISO
IBA		 (PMID:15308636)
GO_REF:0000033		 RGD
GO_Central		 PMID:15308636 GO_REF:0000033 NCBI chr 1:202,394,923...202,399,125
Ensembl chr 1:202,394,897...202,399,427 		JBrowse link
G Yif1b Yip1 interacting factor homolog B, membrane trafficking protein located_in
is_active_in		 IDA
IBA
IEA
ISO		 PMID:26077767
GO_REF:0000033
GO_REF:0000104
(MGI:6393020|PMID:26077767)
PMID:18685031
(PMID:26077767)		 GO_Central
UniProt
RGD		 PMID:26077767 PMID:26077767 PMID:18685031 GO_REF:0000033 GO_REF:0000104 MGI:6393020, RGD:11342577, RGD:21201278 NCBI chr 1:84,539,673...84,549,906
Ensembl chr 1:84,539,722...84,549,904 		JBrowse link
G Yipf7 Yip1 domain family, member 7 located_in ISO (PMID:25208654) RGD PMID:25208654 NCBI chr14:38,571,045...38,599,070
Ensembl chr14:38,571,066...38,599,055 		JBrowse link
endoplasmic reticulum-Golgi intermediate compartment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap1 ATPase H+ transporting accessory protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:152,079,954...152,087,034
Ensembl chr  X:152,079,865...152,087,034 		JBrowse link
G Azin2 antizyme inhibitor 2 located_in ISS
ISO		 GO_REF:0000024
(MGI:5582167|PMID:19449338)		 UniProt
RGD		 PMID:19449338 GO_REF:0000024 MGI:5582167 NCBI chr 5:141,281,310...141,310,415
Ensembl chr 5:141,281,249...141,310,397 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:16,531,192...16,626,974
Ensembl chr10:16,531,194...16,626,957 		JBrowse link
G Ergic2 ERGIC and golgi 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:181,090,808...181,123,074
Ensembl chr 4:181,090,808...181,123,060 		JBrowse link
G Ergic3 ERGIC and golgi 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:144,525,059...144,534,813
Ensembl chr 3:144,525,092...144,534,813 		JBrowse link
G Golga2 golgin A2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279 		JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:96,347,258...96,358,145
Ensembl chr 1:96,347,150...96,358,157 		JBrowse link
G Lamp5 lysosomal-associated membrane protein family, member 5 located_in ISO
ISS		 (PMID:21642595)
GO_REF:0000024		 RGD
UniProt		 PMID:21642595 GO_REF:0000024 NCBI chr 3:123,372,462...123,384,973
Ensembl chr 3:123,372,462...123,384,952 		JBrowse link
G Lman1 lectin, mannose-binding, 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:59,508,996...59,530,873
Ensembl chr18:59,508,996...59,530,851 		JBrowse link
G Lman1l lectin, mannose-binding, 1 like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:58,010,839...58,029,599
Ensembl chr 8:58,010,839...58,023,681 		JBrowse link
G Mppe1 metallophosphoesterase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:60,763,418...60,781,553
Ensembl chr18:60,763,419...60,781,553 		JBrowse link
G Nat8 N-acetyltransferase 8 located_in ISS
ISO		 GO_REF:0000024
(PMID:19011241)		 UniProt
RGD		 PMID:19011241 GO_REF:0000024 NCBI chr 4:118,279,521...118,284,671
Ensembl chr 4:118,270,954...118,281,763 		JBrowse link
G Nat8b N-acetyltransferase 8B located_in ISO (PMID:19011241) RGD PMID:19011241 NCBI chr 4:118,359,445...118,364,351
Ensembl chr 4:118,359,443...118,363,563 		JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501 		JBrowse link
G Plpp3 phospholipid phosphatase 3 located_in ISO
ISS		 (PMID:23591818)
GO_REF:0000024		 RGD
UniProt		 PMID:23591818 GO_REF:0000024 NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205 		JBrowse link
G Rab2a RAB2A, member RAS oncogene family located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:21,676,017...21,740,035
Ensembl chr 5:21,676,129...21,739,899 		JBrowse link
G Robo1 roundabout guidance receptor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203 		JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026 		JBrowse link
G Sppl3 signal peptide peptidase like 3 located_in ISO (MGI:5640905|PMID:25384971) RGD PMID:25384971 MGI:5640905 NCBI chr12:41,515,635...41,600,079
Ensembl chr12:41,515,640...41,600,126 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000044
(PMID:30842662)
(PMID:32690950), (PMID:37832545)
(MGI:7548257|PMID:37832545)		 UniProt
RGD		 PMID:30842662 PMID:32690950 PMID:37832545 GO_REF:0000044 MGI:7548257 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335 		JBrowse link
G Stx17 syntaxin 17 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:62,446,138...62,506,108
Ensembl chr 5:62,446,187...62,504,451 		JBrowse link
G Stx5 syntaxin 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:205,637,401...205,653,563
Ensembl chr 1:205,637,413...205,653,563 		JBrowse link
G Surf1 SURF1, cytochrome c oxidase assembly factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:10,241,793...10,244,686
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Surf4 surfeit 4 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:10,248,360...10,261,537
Ensembl chr 3:10,241,837...10,263,315 		JBrowse link
G Tm6sf2 transmembrane 6 superfamily member 2 located_in
is_active_in		 ISO
IBA
ISS		 (PMID:24927523)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:24927523 GO_REF:0000024 GO_REF:0000033 NCBI chr16:19,344,218...19,351,431
Ensembl chr16:19,344,222...19,351,431 		JBrowse link
G Tmed1 transmembrane p24 trafficking protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:20,059,937...20,063,567
Ensembl chr 8:20,059,892...20,063,677 		JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903 		JBrowse link
G Tmed3 transmembrane p24 trafficking protein 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:90,241,516...90,249,429
Ensembl chr 8:90,241,516...90,249,346 		JBrowse link
G Tmed5 transmembrane p24 trafficking protein 5 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:1,607,895...1,619,028
Ensembl chr14:1,607,819...1,628,426 		JBrowse link
G Tmed7 transmembrane p24 trafficking protein 7 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:39,318,564...39,325,640
Ensembl chr18:39,297,351...39,325,640 		JBrowse link
G Tmed9 transmembrane p24 trafficking protein 9 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:9,029,646...9,034,160
Ensembl chr17:9,029,646...9,034,176 		JBrowse link
G Tmem199 transmembrane protein 199 located_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26833330)		 UniProt
Ensembl
RGD		 PMID:26833330 GO_REF:0000024 GO_REF:0000107 NCBI chr10:63,402,493...63,407,065
Ensembl chr10:63,402,494...63,407,108 		JBrowse link
G Vma21 vacuolar ATPase assembly factor VMA21 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:149,491,709...149,501,010
Ensembl chr  X:149,491,738...149,499,272 		JBrowse link
G Vmp1 vacuole membrane protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:71,405,058...71,505,045
Ensembl chr10:71,405,452...71,505,007 		JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B located_in ISO (PMID:21865173) RGD PMID:21865173 NCBI chr 7:66,557,862...67,128,429
Ensembl chr 7:66,558,471...67,128,429 		JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules located_in
is_active_in		 ISO
IBA		 (PMID:18614018)
GO_REF:0000033		 RGD
GO_Central		 PMID:18614018 GO_REF:0000033 NCBI chr 1:135,526,363...135,557,091
Ensembl chr 1:135,526,386...135,554,759 		JBrowse link
G Yif1b Yip1 interacting factor homolog B, membrane trafficking protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:84,539,673...84,549,906
Ensembl chr 1:84,539,722...84,549,904 		JBrowse link
TRAPPI protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trappc5 trafficking protein particle complex subunit 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:1,737,666...1,741,312
Ensembl chr12:1,737,627...1,742,637 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21392
    cellular anatomical entity 21234
      cytoplasm 12359
        endoplasmic reticulum-Golgi intermediate compartment 110
          TRAPPI protein complex 1
          endoplasmic reticulum-Golgi intermediate compartment membrane 39
Path 2
Term Annotations click to browse term
  cellular_component 21392
    cellular anatomical entity 21234
      organelle 14344
        membrane-bounded organelle 12919
          intracellular membrane-bounded organelle 12331
            endoplasmic reticulum-Golgi intermediate compartment 110
              TRAPPI protein complex 1
              endoplasmic reticulum-Golgi intermediate compartment membrane 39
paths to the root