Gene: Tm6sf2 (transmembrane 6 superfamily member 2) Rattus norvegicus
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Symbol: Tm6sf2
Name: transmembrane 6 superfamily member 2
Description: INVOLVED IN regulation of lipid metabolic process (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); myocardial infarction (ortholog); nonalcoholic fatty liver disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; flutamide
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC689029; MGC188225; similar to transmembrane 6 superfamily member 2
Orthologs:
Homo sapiens (human) : TM6SF2 (transmembrane 6 superfamily member 2)  HGNC  Alliance
Mus musculus (house mouse) : Tm6sf2 (transmembrane 6 superfamily member 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tm6sf2 (transmembrane 6 superfamily member 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TM6SF2 (transmembrane 6 superfamily member 2)
Canis lupus familiaris (dog) : TM6SF2 (transmembrane 6 superfamily member 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tm6sf2 (transmembrane 6 superfamily member 2)
Sus scrofa (pig) : TM6SF2 (transmembrane 6 superfamily member 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01621,092,483 - 21,099,695 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01620,941,990 - 20,949,202 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,827,481 - 19,834,693 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1619,532,903 - 19,540,115 (-)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tm6sf2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1597457
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE