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Gene: Chp1 (calcineurin-like EF-hand protein 1) Rattus norvegicus
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Symbol: Chp1
Name: calcineurin-like EF-hand protein 1
Description: Exhibits calcium ion binding activity; kinase binding activity; and microtubule binding activity. Involved in several processes, including microtubule cytoskeleton organization; protein stabilization; and regulation of protein modification process. Localizes to several cellular components, including the Golgi membrane; endoplasmic reticulum; and transport vesicle. Human ortholog(s) of this gene implicated in spastic ataxia. Orthologous to human CHP1 (calcineurin like EF-hand protein 1); PARTICIPATES IN Alzheimer's disease pathway; amyotrophic lateral sclerosis pathway; apoptotic cell death pathway; INTERACTS WITH 2,6-dinitrotoluene; 2-ethoxyethanol; 2-methoxyethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: calcineurin B homologous protein 1; calcineurin B-like protein; calcineurin homologous protein; calcium binding protein p22; calcium-binding protein CHP; calcium-binding protein p22; Chp; EF-hand Ca2+-binding protein p22; EF-hand calcium-binding domain-containing protein p22; Wrch2
Orthologs:
Homo sapiens (human) : CHP1 (calcineurin like EF-hand protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Chp1 (calcineurin-like EF hand protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chp1 (calcineurin like EF-hand protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CHP1 (calcineurin like EF-hand protein 1)
Canis lupus familiaris (dog) : CHP1 (calcineurin like EF-hand protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chp1 (calcineurin like EF-hand protein 1)
Sus scrofa (pig) : CHP1 (calcineurin like EF-hand protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03111,354,506 - 111,389,998 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3111,354,506 - 111,389,989 (+)Ensembl
Rnor_5.03117,902,988 - 117,938,480 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43106,066,389 - 106,101,635 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13105,962,816 - 105,998,059 (+)NCBI
Celera3105,447,792 - 105,483,065 (+)NCBICelera
Cytogenetic Map3q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Chp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620447
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.