ONTOLOGY REPORT - ANNOTATIONS
Term: ATP biosynthetic process
Accession: GO:0006754
browse the term
Definition: The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Synonyms: exact_synonym: ATP anabolism; ATP biosynthesis; ATP formation; ATP synthesis
narrow_synonym: ATP regeneration
alt_id: GO:0006758; GO:0006759
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Aldoa
aldolase, fructose-bisphosphate A
involved_in
ISO
(PMID:14615364)
RGD
PMID:14615364
NCBI chr 1:181,402,275...181,407,476
Ensembl chr 1:181,402,275...181,406,182
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Atp5f1a
ATP synthase F1 subunit alpha
involved_in
ISO
(PMID:21106936)
RGD
PMID:21106936
NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794
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Atp5f1b
ATP synthase F1 subunit beta
involved_in
ISO
(PMID:17510399), (PMID:21106936)
RGD
PMID:17510399 PMID:21106936
NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273
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Atp5mf
ATP synthase membrane subunit f
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr12:9,421,665...9,428,236
Ensembl chr12:9,421,579...9,428,236
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Cox11
cytochrome c oxidase copper chaperone COX11
involved_in
ISO
(PMID:36030551)
RGD
PMID:36030551
NCBI chr10:75,458,735...75,465,322
Ensembl chr10:75,458,749...75,465,322
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Dmac2l
distal membrane arm assembly component 2 like
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 6:88,205,580...88,223,934
Ensembl chr 6:88,205,700...88,223,933
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ENSRNOG00000062467
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
Ensembl chr19:13,663,574...13,664,092
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Fam3a
FAM3 metabolism regulating signaling molecule A
acts_upstream_of_or_within
ISO
(PMID:31944392)
RGD
PMID:31944392
NCBI chr X:152,166,716...152,175,327
Ensembl chr X:152,165,535...152,175,362
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Ldhc
lactate dehydrogenase C
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3775042 (PMID:18367675) GO_REF:0000107
RGD Ensembl
PMID:18367675
GO_REF:0000107
NCBI chr 1:97,385,984...97,403,382
Ensembl chr 1:97,382,379...97,403,378
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Lipa
lipase A, lysosomal acid type
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2451080 (PMID:24287405)
Ensembl RGD
PMID:24287405
GO_REF:0000107
NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633
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LOC120093241
ubiquinol-cytochrome-c reductase complex assembly factor 3-like
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 6:41,725,311...41,725,677
Ensembl chr 6:41,725,311...41,725,580
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Nudt2
nudix hydrolase 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:56,628,265...56,643,104
Ensembl chr 5:56,628,265...56,643,104
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Slc25a13
solute carrier family 25 member 13
involved_in
ISO IEA
(PMID:12851387) GO_REF:0000107
RGD Ensembl
PMID:12851387
GO_REF:0000107
NCBI chr 4:34,179,224...34,361,912
Ensembl chr 4:34,179,224...34,361,902
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Tgfb1
transforming growth factor, beta 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:10513816)
UniProt RGD
PMID:10513816
GO_REF:0000024
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Uqcc3
ubiquinol-cytochrome c reductase complex assembly factor 3
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr 1:205,773,591...205,774,369
Ensembl chr 1:205,772,780...205,774,376
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Ak3
adenylate kinase 3
IDA
RGD
PMID:5484813
RGD:2301093
NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625
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Entpd1
ectonucleoside triphosphate diphosphohydrolase 1
IMP
RGD
PMID:21325440
RGD:9685453
NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
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Mir675
microRNA 675
acts_upstream_of
ISO
(PMID:31574452)
RGD
PMID:31574452
NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358
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Parp1
poly (ADP-ribose) polymerase 1
involved_in
ISO
(PMID:24289924)
RGD
PMID:24289924
NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
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Pid1
phosphotyrosine interaction domain containing 1
involved_in
ISO
(PMID:20165904)
RGD
PMID:20165904
NCBI chr 9:85,284,335...85,503,035
Ensembl chr 9:85,284,335...85,503,044
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Atp5if1
ATP synthase inhibitory factor subunit 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668
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Adcy10
adenylate cyclase 10
IMP
RGD
PMID:31172217
RGD:329403053
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
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Bcl2l1
Bcl2-like 1
involved_in
IMP
PMID:23792689
CAFA
PMID:23792689
RGD:12793033
NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479 Ensembl chr 1:141,253,523...141,303,479
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Eno1
enolase 1
involved_in
ISO
UniProtKB:Q01986 (PMID:15459207)
RGD
PMID:15459207
NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336 Ensembl chr 3:160,719,951...160,731,336
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Hnf1a
HNF1 homeobox A
IMP
RGD
PMID:20841353
RGD:150540305
NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
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Il4
interleukin 4
involved_in
ISO
(PMID:29061364)
RGD
PMID:29061364
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Map2k1
mitogen activated protein kinase kinase 1
involved_in
IMP IGI
PMID:15459207
CAFA
PMID:15459207 PMID:15459207
RGD:12793039 , RGD:12793039
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
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Myc
MYC proto-oncogene, bHLH transcription factor
IMP
RGD
PMID:22629444
RGD:7240532
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
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Ndufc2
NADH:ubiquinone oxidoreductase subunit C2
IMP
RGD
PMID:26888427
RGD:11040458
NCBI chr 1:151,711,965...151,718,188
Ensembl chr 1:151,711,901...151,718,189
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Pid1
phosphotyrosine interaction domain containing 1
involved_in
ISO
(PMID:21080215)
RGD
PMID:21080215
NCBI chr 9:85,284,335...85,503,035
Ensembl chr 9:85,284,335...85,503,044
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Ppara
peroxisome proliferator activated receptor alpha
acts_upstream_of
ISO
(PMID:31574452)
RGD
PMID:31574452
NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
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Prkn
parkin RBR E3 ubiquitin protein ligase
IMP
RGD
PMID:24096089
RGD:10413842
NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
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Sirt1
sirtuin 1
involved_in
ISO
(PMID:24747689)
RGD
PMID:24747689
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
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Slc25a12
solute carrier family 25 member 12
IMP
RGD
PMID:19764902
RGD:13628741
NCBI chr 3:56,097,166...56,191,841
Ensembl chr 3:56,097,269...56,192,100
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Stat3
signal transducer and activator of transcription 3
IMP
RGD
PMID:23590160
RGD:8694322
NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
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Tafazzin
tafazzin, phospholipid-lysophospholipid transacylase
IMP
RGD
PMID:20348225
RGD:13432160
NCBI chr X:152,065,539...152,076,178
Ensembl chr X:152,065,609...152,074,001
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Tmsb4x
thymosin beta 4, X-linked
involved_in
ISO
(PMID:21106936)
RGD
PMID:21106936
NCBI chr X:27,144,666...27,146,667
Ensembl chr X:27,128,610...27,146,667 Ensembl chr10:27,128,610...27,146,667
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(PMID:28802038)
RGD
PMID:28802038
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Vcp
valosin-containing protein
involved_in
ISO
(PMID:23498975)
RGD
PMID:23498975
NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
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AABR07025819.1
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
Ensembl chr16:48,628,407...48,628,892
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AABR07036567.1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr12:42,791,929...42,792,339
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AC098622.1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 1:204,055,499...204,077,329
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AC105662.3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 6:98,696,037...98,697,181
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Atp5f1a
ATP synthase F1 subunit alpha
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794
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Atp5f1c
ATP synthase F1 subunit gamma
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr17:68,423,927...68,446,169
Ensembl chr17:68,423,909...68,608,367
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Atp5f1d
ATP synthase F1 subunit delta
involved_in
TAS IBA IEA
GO_REF:0000033 GO_REF:0000002
GO_Central InterPro RGD
PMID:9578578
GO_REF:0000002 GO_REF:0000033, RGD:724594
NCBI chr 7:9,560,604...9,565,919
Ensembl chr 7:9,560,608...9,565,929
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Atp5f1e
ATP synthase F1 subunit epsilon
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:163,259,072...163,261,974
Ensembl chr 3:163,260,476...163,261,450
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Atp5hl1
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d-like 1
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr16:48,628,349...48,628,948
Ensembl chr16:48,628,407...48,628,892
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Atp5mc1
ATP synthase membrane subunit c locus 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:81,024,056...81,026,780
Ensembl chr10:81,023,925...81,027,124 Ensembl chr10:81,023,925...81,027,124
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Atp5mc1l2
ATP synthase membrane subunit c locus 1 like 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:66,654,187...66,654,763
Ensembl chr 6:66,654,294...66,654,692
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Atp5mc2
ATP synthase membrane subunit c locus 2
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 7:133,791,341...133,799,713
Ensembl chr 7:133,791,342...133,799,733
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Atp5mc2l1
ATP synthase membrane subunit c locus 2 like 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 9:76,549,370...76,549,840
Ensembl chr 9:76,549,421...76,549,840
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Atp5mc2l2
ATP synthase membrane subunit c locus 2 like 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:26,836,362...26,836,853
Ensembl chr 2:26,836,416...26,836,838
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Atp5mc3
ATP synthase membrane subunit c locus 3
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 3:58,810,535...58,813,185
Ensembl chr 3:58,810,535...58,814,279
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Atp5me
ATP synthase membrane subunit e
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:1,319,868...1,320,996
Ensembl chr14:1,319,868...1,321,013
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Atp5mg
ATP synthase membrane subunit G
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr 8:45,225,680...45,233,630
Ensembl chr 8:45,225,686...45,233,559
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Atp5mgl3
ATP synthase membrane subunit G like 3
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr 6:15,945,315...15,945,626
Ensembl chr 6:15,945,315...15,945,626
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Atp5pb
ATP synthase peripheral stalk-membrane subunit b
involved_in
IEA IBA
GO_REF:0000104 GO_REF:0000033
UniProt GO_Central
GO_REF:0000033 GO_REF:0000104
NCBI chr 2:193,424,138...193,435,418
Ensembl chr 2:193,424,047...193,435,418
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Atp5pd
ATP synthase peripheral stalk subunit d
involved_in
IEA IBA
GO_REF:0000002 GO_REF:0000033
InterPro GO_Central
GO_REF:0000002 GO_REF:0000033
NCBI chr10:100,657,700...100,662,960
Ensembl chr10:100,657,708...100,663,479
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Atp5pf
ATP synthase peripheral stalk subunit F6
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr11:23,881,594...23,889,581
Ensembl chr11:23,881,592...23,889,119
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Atp6v1a
ATPase H+ transporting V1 subunit A
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr11:56,561,444...56,614,694
Ensembl chr11:56,560,974...56,614,694
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ENSRNOG00000066253
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 5:145,787,991...145,788,671
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LOC103693662
ATP synthase F(0) complex subunit C3, mitochondrial pseudogene
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr15:35,429,231...35,430,741
Ensembl chr15:35,430,321...35,430,686 Ensembl chr15:35,430,321...35,430,686
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Mt-atp6
mitochondrially encoded ATP synthase membrane subunit 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599
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Taf3
TATA-box binding protein associated factor 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:68,455,389...68,608,367
Ensembl chr17:68,423,909...68,608,367
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Atp5f1a
ATP synthase F1 subunit alpha
involved_in
ISO IEA
(PMID:12110673) GO_REF:0000107
RGD Ensembl
PMID:12110673
GO_REF:0000107
NCBI chr18:71,292,406...71,300,342
Ensembl chr18:71,292,374...71,300,794
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Atp5f1b
ATP synthase F1 subunit beta
involved_in
ISO IBA IEA
(PMID:12110673) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:12110673
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:515,454...521,858
Ensembl chr 7:515,460...567,273
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Atp5f1c
ATP synthase F1 subunit gamma
involved_in
ISO
(PMID:12110673)
RGD
PMID:12110673
NCBI chr17:68,423,927...68,446,169
Ensembl chr17:68,423,909...68,608,367
G
Atp5f1d
ATP synthase F1 subunit delta
involved_in
ISO IEA
(PMID:12110673) GO_REF:0000107
RGD Ensembl
PMID:12110673
GO_REF:0000107
NCBI chr 7:9,560,604...9,565,919
Ensembl chr 7:9,560,608...9,565,929
G
Atp5f1e
ATP synthase F1 subunit epsilon
involved_in
ISO IBA
(PMID:12110673) GO_REF:0000033
RGD GO_Central
PMID:12110673
GO_REF:0000033
NCBI chr 3:163,259,072...163,261,974
Ensembl chr 3:163,260,476...163,261,450
G
Atp5me
ATP synthase membrane subunit e
involved_in
ISO
(PMID:12110673)
RGD
PMID:12110673
NCBI chr14:1,319,868...1,320,996
Ensembl chr14:1,319,868...1,321,013
G
Atp5mf
ATP synthase membrane subunit f
involved_in
ISO IBA
(PMID:12110673) GO_REF:0000033
RGD GO_Central
PMID:12110673
GO_REF:0000033
NCBI chr12:9,421,665...9,428,236
Ensembl chr12:9,421,579...9,428,236
G
Atp5mg
ATP synthase membrane subunit G
involved_in
ISO
(PMID:12110673)
RGD
PMID:12110673
NCBI chr 8:45,225,680...45,233,630
Ensembl chr 8:45,225,686...45,233,559
G
Atp5pb
ATP synthase peripheral stalk-membrane subunit b
involved_in
ISO IEA
(PMID:12110673) GO_REF:0000107
RGD Ensembl
PMID:12110673
GO_REF:0000107
NCBI chr 2:193,424,138...193,435,418
Ensembl chr 2:193,424,047...193,435,418
G
Atp5pd
ATP synthase peripheral stalk subunit d
involved_in
ISO
(PMID:12110673)
RGD
PMID:12110673
NCBI chr10:100,657,700...100,662,960
Ensembl chr10:100,657,708...100,663,479
G
Atp5pf
ATP synthase peripheral stalk subunit F6
involved_in
ISO
(PMID:12110673)
RGD
PMID:12110673
NCBI chr11:23,881,594...23,889,581
Ensembl chr11:23,881,592...23,889,119
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Atp5po
ATP synthase peripheral stalk subunit OSCP
involved_in
ISO IBA IEA
(PMID:15850986) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:15850986
GO_REF:0000033 GO_REF:0000107
NCBI chr11:31,165,218...31,171,530
Ensembl chr11:31,165,217...31,171,592
G
LOC100361879
ATP synthase subunit epsilon, mitochondrial-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:77,863,480...77,864,135
Ensembl chr14:77,863,571...77,863,729
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Mt-atp6
mitochondrially encoded ATP synthase membrane subunit 6
involved_in
ISO
(PMID:12110673)
RGD
PMID:12110673
NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599 NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599
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Mt-atp8
mitochondrially encoded ATP synthase membrane subunit 8
involved_in
ISO
(PMID:12110673)
RGD
PMID:12110673
NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961 NCBI chr MT:7,758...7,961
Ensembl chr MT:7,758...7,961
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Sdha
succinate dehydrogenase complex flavoprotein subunit A
involved_in
NAS
PMID:30030361
ComplexPortal
PMID:30030361
RGD:151356635
NCBI chr 1:28,935,965...28,960,936
Ensembl chr 1:28,940,164...28,961,535
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Sdhb
succinate dehydrogenase complex iron sulfur subunit B
involved_in
NAS
PMID:30030361
ComplexPortal
PMID:30030361
RGD:151356635
NCBI chr 5:153,264,906...153,285,570
Ensembl chr 5:153,264,899...153,314,293
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Sdhc
succinate dehydrogenase complex subunit C
involved_in
NAS
PMID:30030361
ComplexPortal
PMID:30030361
RGD:151356635
NCBI chr13:83,544,652...83,565,560
Ensembl chr13:83,544,652...83,566,253
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Sdhd
succinate dehydrogenase complex subunit D
involved_in
NAS
PMID:30030361
ComplexPortal
PMID:30030361
RGD:151356635
NCBI chr 8:50,944,702...50,954,298
Ensembl chr 8:50,944,704...50,954,238
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Stoml2
stomatin like 2
involved_in
ISO
(PMID:23028053)
RGD
PMID:23028053
NCBI chr 5:57,256,227...57,259,824
Ensembl chr 5:57,256,220...57,259,920
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Sphk2
sphingosine kinase 2
involved_in
ISO
(PMID:25637806)
RGD
PMID:25637806
NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391
G
Antkmt
adenine nucleotide translocase lysine methyltransferase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:14,812,274...14,814,798
Ensembl chr10:14,812,269...14,814,193
G
Atpsckmt
ATP synthase c subunit lysine N-methyltransferase
involved_in
ISO IBA ISS
(PMID:30530489) GO_REF:0000033 GO_REF:0000024
RGD GO_Central UniProt
PMID:30530489
GO_REF:0000024 GO_REF:0000033
NCBI chr 2:82,603,086...82,618,325
Ensembl chr 2:82,603,009...82,618,308
G
Dnajc30
DnaJ heat shock protein family (Hsp40) member C30
involved_in
ISO
(PMID:30318146)
RGD
PMID:30318146
NCBI chr12:21,628,319...21,629,398
Ensembl chr12:21,626,450...21,629,408
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all