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ATP biosynthetic process - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:ATP biosynthetic process
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Accession:GO:0006754 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Synonyms:exact_synonym: ATP anabolism;   ATP biosynthesis;   ATP formation;   ATP synthesis
 narrow_synonym: ATP regeneration
 alt_id: GO:0006758;   GO:0006759

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ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A involved_in ISO (PMID:14615364) RGD PMID:14615364 NCBI chr 1:190,832,820...190,838,021
Ensembl chr 1:181,402,275...181,406,182 		JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO
IEA		 (PMID:21106936)
GO_REF:0000107
GO_REF:0000043		 RGD
Ensembl
UniProt		 PMID:21106936 GO_REF:0000043 GO_REF:0000107 NCBI chr18:73,567,537...73,575,473
Ensembl chr18:71,292,374...71,300,794 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO
IEA
ISS		 (PMID:17510399), (PMID:21106936)
GO_REF:0000107
GO_REF:0000043
PMID:9736690		 RGD
Ensembl
UniProt		 PMID:17510399 PMID:21106936 PMID:9736690 GO_REF:0000043 GO_REF:0000107, RGD:596936199 NCBI chr 7:1,100,058...1,106,461
Ensembl chr 7:515,460...567,273 		JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:73,333,584...73,355,872
Ensembl chr17:68,423,909...68,608,367 		JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:10,211,260...10,218,989
Ensembl chr 7:9,560,608...9,565,929 		JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:183,677,270...183,680,172
Ensembl chr 3:163,260,476...163,261,450 		JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:1,464,788...1,465,989
Ensembl chr14:1,319,868...1,321,013 		JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:14,535,435...14,542,007
Ensembl chr12:9,421,579...9,428,236 		JBrowse link
G Atp5mg ATP synthase membrane subunit G involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:54,122,457...54,130,407
Ensembl chr 8:45,225,686...45,233,559 		JBrowse link
G Atp5mgl3 ATP synthase membrane subunit G like 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:21,697,481...21,697,792
Ensembl chr 6:15,945,315...15,945,626 		JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:44,651,171...44,657,483
Ensembl chr11:31,165,217...31,171,592 		JBrowse link
G Cox11 cytochrome c oxidase copper chaperone COX11 involved_in ISO
IEA		 (PMID:36030551)
GO_REF:0000107		 RGD
Ensembl		 PMID:36030551 GO_REF:0000107 NCBI chr10:75,458,735...75,465,322
Ensembl chr10:75,458,749...75,465,322 		JBrowse link
G Dmac2l distal membrane arm assembly component 2 like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:93,941,605...93,959,932
Ensembl chr 6:88,205,700...88,223,933 		JBrowse link
G ENSRNOG00000062467 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr19:13,663,574...13,664,092 JBrowse link
G Fam3a FAM3 metabolism regulating signaling molecule A acts_upstream_of_or_within ISO
IEA		 (PMID:31944392)
GO_REF:0000107		 RGD
Ensembl		 PMID:31944392 GO_REF:0000107 NCBI chr  X:157,317,993...157,326,640
Ensembl chr  X:152,165,535...152,175,362 		JBrowse link
G Ldhc lactate dehydrogenase C acts_upstream_of_or_within ISO
IEA		 MGI:3775042 (PMID:18367675)
GO_REF:0000107		 RGD
Ensembl		 PMID:18367675 GO_REF:0000107 NCBI chr 1:106,522,140...106,539,649
Ensembl chr 1:97,382,379...97,403,378 		JBrowse link
G Letmd1 LETM1 domain containing 1 acts_upstream_of_or_within ISO
IEA		 (PMID:31980577)
GO_REF:0000107		 RGD
Ensembl		 PMID:31980577 GO_REF:0000107 NCBI chr 7:131,584,241...131,597,797
Ensembl chr 7:131,584,259...131,597,796 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO
IEA		 MGI:2451080 (PMID:24287405)
GO_REF:0000107		 RGD
Ensembl		 PMID:24287405 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G LOC100361879 ATP synthase subunit epsilon, mitochondrial-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:82,087,509...82,088,367
Ensembl chr14:77,863,571...77,863,729 		JBrowse link
G LOC120093241 ubiquinol-cytochrome-c reductase complex assembly factor 3-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:41,725,311...41,725,677
Ensembl chr 6:41,725,311...41,725,580 		JBrowse link
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599 		JBrowse link
G Mt-atp8 mitochondrially encoded ATP synthase membrane subunit 8 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr MT:7,758...7,961
Ensembl chr MT:7,758...7,961 		JBrowse link
G Nudt2 nudix hydrolase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:56,628,265...56,643,104
Ensembl chr 5:56,628,265...56,643,104 		JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO
IEA		 (PMID:12851387)
GO_REF:0000107		 RGD
Ensembl		 PMID:12851387 GO_REF:0000107 NCBI chr 4:35,145,721...35,328,403
Ensembl chr 4:34,179,224...34,361,902 		JBrowse link
G Taf3 TATA-box binding protein associated factor 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:73,365,162...73,518,053
Ensembl chr17:68,423,909...68,608,367 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:10513816)		 UniProt
Ensembl
RGD		 PMID:10513816 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Uqcc3 ubiquinol-cytochrome c reductase complex assembly factor 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:205,773,591...205,774,369
Ensembl chr 1:205,772,780...205,774,376 		JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 IDA RGD PMID:5484813 RGD:2301093 NCBI chr 1:236,151,012...236,178,689
Ensembl chr 1:226,739,318...226,764,625 		JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IMP RGD PMID:21325440 RGD:9685453 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317 		JBrowse link
G Mir675 microRNA 675 acts_upstream_of ISO (PMID:31574452) RGD PMID:31574452 NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358 		JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 involved_in ISO
IEA		 (PMID:24289924)
GO_REF:0000107		 RGD
Ensembl		 PMID:24289924 GO_REF:0000107 NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404 		JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO
IEA		 (PMID:20165904)
GO_REF:0000107		 RGD
Ensembl		 PMID:20165904 GO_REF:0000107 NCBI chr 9:92,732,471...92,951,168
Ensembl chr 9:85,284,335...85,503,044 		JBrowse link
negative regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:150,022,960...150,026,677
Ensembl chr 5:144,738,950...144,742,668 		JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:31172217 RGD:329403053 NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951 		JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:161,713,777...161,764,844
Ensembl chr 3:141,253,523...141,303,479
Ensembl chr 1:141,253,523...141,303,479 		JBrowse link
G Eno1 enolase 1 involved_in ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:166,002,867...166,014,252
Ensembl chr 5:160,719,951...160,731,336
Ensembl chr 3:160,719,951...160,731,336 		JBrowse link
G Hnf1a HNF1 homeobox A IMP RGD PMID:20841353 RGD:150540305 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:29061364) RGD PMID:29061364 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in IMP
IGI		 PMID:15459207 CAFA PMID:15459207 PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:73,578,747...73,650,184
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:22629444 RGD:7240532 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 IMP RGD PMID:26888427 RGD:11040458 NCBI chr 1:161,122,370...161,129,413
Ensembl chr 1:151,711,901...151,718,189 		JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (PMID:21080215) RGD PMID:21080215 NCBI chr 9:92,732,471...92,951,168
Ensembl chr 9:85,284,335...85,503,044 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO
IEA		 (PMID:31574452)
GO_REF:0000107		 RGD
Ensembl		 PMID:31574452 GO_REF:0000107 NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:24096089 RGD:10413842 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) RGD PMID:24747689 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:76,504,868...76,599,536
Ensembl chr 3:56,097,269...56,192,100 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 IMP RGD PMID:23590160 RGD:8694322 NCBI chr10:86,311,528...86,363,513
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase IMP RGD PMID:20348225 RGD:13432160 NCBI chr  X:157,216,826...157,230,524
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
G Tmsb4x thymosin beta 4, X-linked involved_in ISO (PMID:21106936) RGD PMID:21106936 NCBI chr  X:30,761,611...30,763,612
Ensembl chr  X:27,128,610...27,146,667
Ensembl chr10:27,128,610...27,146,667 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:28802038) RGD PMID:28802038 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
G Vcp valosin-containing protein involved_in ISO
IEA		 (PMID:23498975)
GO_REF:0000107		 RGD
Ensembl		 PMID:23498975 GO_REF:0000107 NCBI chr 5:62,005,984...62,025,387
Ensembl chr 5:57,210,168...57,229,571 		JBrowse link
proton motive force-driven ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025819.1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000104		 GO_Central
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 Ensembl chr16:48,628,407...48,628,892 JBrowse link
G AABR07036567.1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 Ensembl chr12:42,791,929...42,792,339 JBrowse link
G AC098622.1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 Ensembl chr 1:204,055,499...204,077,329 JBrowse link
G AC105662.3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 6:98,696,037...98,697,181 JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha involved_in IEA
ISO
ISS
IBA		 GO_REF:0000002
GO_REF:0000107
(PMID:37244256)
GO_REF:0000024
GO_REF:0000033		 InterPro
Ensembl
RGD
UniProt
GO_Central		 PMID:37244256 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:73,567,537...73,575,473
Ensembl chr18:71,292,374...71,300,794 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:25168243), (PMID:36239646), (PMID:37244256)		 UniProt
Ensembl
InterPro
RGD		 PMID:25168243 PMID:36239646 PMID:37244256 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,100,058...1,106,461
Ensembl chr 7:515,460...567,273 		JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr17:73,333,584...73,355,872
Ensembl chr17:68,423,909...68,608,367 		JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:10,211,260...10,218,989
Ensembl chr 7:9,560,608...9,565,929 		JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:183,677,270...183,680,172
Ensembl chr 3:163,260,476...163,261,450 		JBrowse link
G Atp5hl1 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d-like 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000104		 GO_Central
InterPro
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr16:55,360,802...55,361,401
Ensembl chr16:48,628,407...48,628,892 		JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 involved_in IBA
IEA
ISO
ISS		 GO_REF:0000033
GO_REF:0000002
(PMID:37244256)
GO_REF:0000024		 GO_Central
InterPro
RGD
UniProt		 PMID:37244256 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr10:81,520,762...81,523,735
Ensembl chr10:81,023,925...81,027,124
Ensembl chr10:81,023,925...81,027,124 		JBrowse link
G Atp5mc1l2 ATP synthase membrane subunit c locus 1 like 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:72,381,081...72,381,479
Ensembl chr 6:66,654,294...66,654,692 		JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:135,669,847...135,680,839
Ensembl chr 7:133,791,342...133,799,733 		JBrowse link
G Atp5mc2l1 ATP synthase membrane subunit c locus 2 like 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:83,997,678...84,002,159
Ensembl chr 9:76,549,421...76,549,840 		JBrowse link
G Atp5mc2l2 ATP synthase membrane subunit c locus 2 like 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:28,571,086...28,571,741
Ensembl chr 2:26,836,416...26,836,838 		JBrowse link
G Atp5mc3 ATP synthase membrane subunit c locus 3 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:79,218,014...79,220,664
Ensembl chr 3:58,810,535...58,814,279 		JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:1,464,788...1,465,989
Ensembl chr14:1,319,868...1,321,013 		JBrowse link
G Atp5mg ATP synthase membrane subunit G involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:54,122,457...54,130,407
Ensembl chr 8:45,225,686...45,233,559 		JBrowse link
G Atp5mgl3 ATP synthase membrane subunit G like 3 involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 6:21,697,481...21,697,792
Ensembl chr 6:15,945,315...15,945,626 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 2:196,112,459...196,123,737
Ensembl chr 2:193,424,047...193,435,418 		JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr10:101,156,673...101,161,926
Ensembl chr10:100,657,708...100,663,479 		JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:37,368,045...37,375,721
Ensembl chr11:23,881,592...23,889,119 		JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:44,651,171...44,657,483
Ensembl chr11:31,165,217...31,171,592 		JBrowse link
G ENSRNOG00000066253 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 5:145,787,991...145,788,671 JBrowse link
G LOC100361879 ATP synthase subunit epsilon, mitochondrial-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:82,087,509...82,088,367
Ensembl chr14:77,863,571...77,863,729 		JBrowse link
G LOC103693662 ATP synthase F(0) complex subunit C3, mitochondrial pseudogene involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:39,605,308...39,606,818
Ensembl chr15:35,430,321...35,430,686
Ensembl chr15:35,430,321...35,430,686 		JBrowse link
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in IBA
IEA
ISO
ISS		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
(PMID:37244256)
GO_REF:0000024		 GO_Central
Ensembl
InterPro
RGD
UniProt		 PMID:37244256 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599 		JBrowse link
G Mt-atp8 mitochondrially encoded ATP synthase membrane subunit 8 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr MT:7,758...7,961
Ensembl chr MT:7,758...7,961 		JBrowse link
G Taf3 TATA-box binding protein associated factor 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:73,365,162...73,518,053
Ensembl chr17:68,423,909...68,608,367 		JBrowse link
proton motive force-driven mitochondrial ATP synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO
IEA		 (PMID:12110673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110673 GO_REF:0000107 NCBI chr18:73,567,537...73,575,473
Ensembl chr18:71,292,374...71,300,794 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO
IBA
IEA		 (PMID:12110673)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12110673 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:1,100,058...1,106,461
Ensembl chr 7:515,460...567,273 		JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr17:73,333,584...73,355,872
Ensembl chr17:68,423,909...68,608,367 		JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in ISO
IEA		 (PMID:12110673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110673 GO_REF:0000107 NCBI chr 7:10,211,260...10,218,989
Ensembl chr 7:9,560,608...9,565,929 		JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in ISO
IBA		 (PMID:12110673)
GO_REF:0000033		 RGD
GO_Central		 PMID:12110673 GO_REF:0000033 NCBI chr 3:183,677,270...183,680,172
Ensembl chr 3:163,260,476...163,261,450 		JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in ISO
IEA		 (PMID:12110673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110673 GO_REF:0000107 NCBI chr14:1,464,788...1,465,989
Ensembl chr14:1,319,868...1,321,013 		JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in ISO
IBA		 (PMID:12110673)
GO_REF:0000033		 RGD
GO_Central		 PMID:12110673 GO_REF:0000033 NCBI chr12:14,535,435...14,542,007
Ensembl chr12:9,421,579...9,428,236 		JBrowse link
G Atp5mg ATP synthase membrane subunit G involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr 8:54,122,457...54,130,407
Ensembl chr 8:45,225,686...45,233,559 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO
IEA		 (PMID:12110673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110673 GO_REF:0000107 NCBI chr 2:196,112,459...196,123,737
Ensembl chr 2:193,424,047...193,435,418 		JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr10:101,156,673...101,161,926
Ensembl chr10:100,657,708...100,663,479 		JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr11:37,368,045...37,375,721
Ensembl chr11:23,881,592...23,889,119 		JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in ISO
IBA
IEA		 (PMID:15850986)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:15850986 GO_REF:0000033 GO_REF:0000107 NCBI chr11:44,651,171...44,657,483
Ensembl chr11:31,165,217...31,171,592 		JBrowse link
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in ISO
IEA		 (PMID:12110673)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110673 GO_REF:0000107 NCBI chr MT:7,919...8,599
Ensembl chr MT:7,919...8,599 		JBrowse link
G Mt-atp8 mitochondrially encoded ATP synthase membrane subunit 8 involved_in ISO (PMID:12110673) RGD PMID:12110673 NCBI chr MT:7,758...7,961
Ensembl chr MT:7,758...7,961 		JBrowse link
G Sdha succinate dehydrogenase complex flavoprotein subunit A involved_in NAS PMID:30030361 ComplexPortal PMID:30030361 RGD:151356635 NCBI chr 1:30,764,553...30,789,523
Ensembl chr 1:28,940,164...28,961,535 		JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B involved_in NAS PMID:30030361 ComplexPortal PMID:30030361 RGD:151356635 NCBI chr 5:153,264,906...153,285,570
Ensembl chr 5:153,264,899...153,314,293 		JBrowse link
G Sdhc succinate dehydrogenase complex subunit C involved_in NAS PMID:30030361 ComplexPortal PMID:30030361 RGD:151356635 NCBI chr13:86,077,133...86,098,025
Ensembl chr13:83,544,652...83,566,253 		JBrowse link
G Sdhd succinate dehydrogenase complex subunit D involved_in NAS PMID:30030361 ComplexPortal PMID:30030361 RGD:151356635 NCBI chr 8:59,841,090...59,850,641
Ensembl chr 8:50,944,704...50,954,238 		JBrowse link
G Stoml2 stomatin like 2 involved_in ISO
IEA		 (PMID:23028053)
GO_REF:0000107		 RGD
Ensembl		 PMID:23028053 GO_REF:0000107 NCBI chr 5:57,256,227...57,259,824
Ensembl chr 5:57,256,220...57,259,920 		JBrowse link
regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sphk2 sphingosine kinase 2 involved_in ISO
IEA		 (PMID:25637806)
GO_REF:0000107		 RGD
Ensembl		 PMID:25637806 GO_REF:0000107 NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antkmt adenine nucleotide translocase lysine methyltransferase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:14,812,274...14,814,798
Ensembl chr10:14,812,269...14,814,193 		JBrowse link
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in ISO
IEA
IBA
ISS		 (PMID:30530489)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:30530489 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:82,603,086...82,618,325
Ensembl chr 2:82,603,009...82,618,308 		JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO
IEA		 (PMID:30318146)
GO_REF:0000107		 RGD
Ensembl		 PMID:30318146 GO_REF:0000107 NCBI chr12:27,264,861...27,265,940
Ensembl chr12:21,626,450...21,629,408 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        purine-containing compound metabolic process 617
          purine nucleotide metabolic process 480
            purine ribonucleotide metabolic process 385
              purine ribonucleotide biosynthetic process 144
                ATP biosynthetic process 75
                  AMP phosphorylation 1
                  negative regulation of ATP biosynthetic process + 5
                  positive regulation of ATP biosynthetic process 18
                  proton motive force-driven ATP synthesis + 39
                  regulation of ATP biosynthetic process + 26
Path 2
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        primary metabolic process 10763
          nucleobase-containing compound metabolic process 5900
            nucleobase-containing small molecule metabolic process 733
              nucleoside phosphate metabolic process 699
                nucleotide metabolic process 540
                  purine nucleotide metabolic process 480
                    purine nucleotide biosynthetic process 181
                      purine ribonucleotide biosynthetic process 144
                        ATP biosynthetic process 75
                          AMP phosphorylation 1
                          negative regulation of ATP biosynthetic process + 5
                          positive regulation of ATP biosynthetic process 18
                          proton motive force-driven ATP synthesis + 39
                          regulation of ATP biosynthetic process + 26
paths to the root