Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atpsckmt (ATP synthase c subunit lysine N-methyltransferase) Rattus norvegicus
Analyze
Symbol: Atpsckmt
Name: ATP synthase c subunit lysine N-methyltransferase
Description: Predicted to have protein-lysine N-methyltransferase activity. Predicted to be involved in peptidyl-lysine trimethylation; positive regulation of sensory perception of pain; and regulation of proton transport. Predicted to localize to the mitochondrial crista. Orthologous to human ATPSCKMT (ATP synthase c subunit lysine N-methyltransferase); INTERACTS WITH flutamide; nefazodone; Soman.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP synthase subunit C lysine N-methyltransferase; Fam173b; family with sequence similarity 173, member B; hypothetical protein LOC499561; LOC499561; RGD1560629; similar to RIKEN cDNA A930016P21; uncharacterized protein LOC499561
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0284,678,892 - 84,694,152 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02104,351,684 - 104,366,888 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4283,693,155 - 83,708,195 (+)NCBIRGSC3.4rn4RGSC3.4
Celera278,126,839 - 78,141,895 (+)NCBICelera
Cytogenetic Map2q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atpsckmt
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560629
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-06-11
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.