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Gene: Atp5mc2 (ATP synthase membrane subunit c locus 2) Rattus norvegicus
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Symbol: Atp5mc2
Name: ATP synthase membrane subunit c locus 2
RGD ID: 620051
Description: Exhibits ligand-gated channel activity. Involved in pore complex assembly; response to 3,3',5-triiodo-L-thyronine; and response to ethanol. Localizes to cation channel complex. Human ortholog(s) of this gene implicated in renal cell carcinoma and urinary bladder cancer. Orthologous to human ATP5MC2 (ATP synthase membrane subunit c locus 2); PARTICIPATES IN electron transport chain pathway; Alzheimer's disease pathway; Huntington's disease pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; ammonium chloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATP synthase F(0) complex subunit C2, mitochondrial; ATP synthase lipid-binding protein; ATP synthase lipid-binding protein, mitochondrial; ATP synthase proteolipid P2; ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9); ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 2; ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9); ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9); Atp5g2; ATPase protein 9; ATPase subunit c
Orthologs:
Homo sapiens (human) : ATP5MC2 (ATP synthase membrane subunit c locus 2)  HGNC  Alliance
Mus musculus (house mouse) : Atp5g2 (ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp5mc2 (ATP synthase membrane subunit c locus 2)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP5MC2 (ATP synthase membrane subunit c locus 2)
Canis lupus familiaris (dog) : ATP5MC2 (ATP synthase membrane subunit c locus 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp5mc2 (ATP synthase membrane subunit c locus 2)
Sus scrofa (pig) : ATP5MC2 (ATP synthase membrane subunit c locus 2)
Chlorocebus sabaeus (African green monkey) : ATP5MC2 (ATP synthase membrane subunit c locus 2)
Heterocephalus glaber (naked mole-rat) : Atp5mc2 (ATP synthase membrane subunit c locus 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07144,264,207 - 144,272,578 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7144,264,199 - 144,272,578 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07142,056,425 - 142,064,796 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47141,412,892 - 141,421,263 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17141,489,329 - 141,494,599 (-)NCBI
Celera7130,218,595 - 130,226,966 (-)NCBICelera
Cytogenetic Map7q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atp5mc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620051
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.