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ONTOLOGY REPORT - ANNOTATIONS


Term:nucleotide metabolic process
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Accession:GO:0009117 term browser browse the term
Definition:The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates).
Synonyms:exact_synonym: nucleotide metabolism


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nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acp3 acid phosphatase 3 JBrowse link 8 112,838,574 112,884,062 RGD:1600115
RGD:1624291
G Ampd2 adenosine monophosphate deaminase 2 JBrowse link 2 210,861,624 210,874,348 RGD:1624291
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 JBrowse link 9 16,845,764 16,848,514 RGD:1600115
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1302361
G Nt5c1a 5'-nucleotidase, cytosolic IA JBrowse link 5 140,888,862 140,909,322 RGD:1600115
G Nt5c1b 5'-nucleotidase, cytosolic IB JBrowse link 6 36,089,450 36,106,843 RGD:1600115
G Nt5c3a 5'-nucleotidase, cytosolic IIIA JBrowse link 4 87,238,325 87,281,234 RGD:1600115
G Nt5c3b 5'-nucleotidase, cytosolic IIIB JBrowse link 10 88,338,700 88,356,538 RGD:1600115
'de novo' AMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adsl adenylosuccinate lyase JBrowse link 7 122,157,201 122,192,328 RGD:1600115
RGD:13792537
G Adss adenylosuccinate synthase JBrowse link 13 95,913,426 95,943,761 RGD:1600115
RGD:13792537
G Adssl1 adenylosuccinate synthase like 1 JBrowse link 6 137,184,818 137,206,694 RGD:1600115
RGD:13792537
'de novo' CTP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctps1 CTP synthase 1 JBrowse link 5 139,475,934 139,505,065 RGD:1600115
G Ctps2 CTP synthase 2 JBrowse link X 33,383,087 33,522,852 RGD:1600115
'de novo' IMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07036855.1 RGD:1600115
G Adsl adenylosuccinate lyase JBrowse link 7 122,157,201 122,192,328 RGD:1600115
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase JBrowse link 9 78,862,013 78,882,061 RGD:70804
RGD:13792537
RGD:1600115
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase JBrowse link 11 31,780,477 31,805,728 RGD:1600115
G LOC100910308 multifunctional protein ADE2-like JBrowse link 14 33,968,258 33,977,367 RGD:1600115
G Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase JBrowse link 14 33,563,884 33,580,944 RGD:1600115
G Pfas phosphoribosylformylglycinamidine synthase JBrowse link 10 55,571,881 55,593,384 RGD:1600115
G Ppat phosphoribosyl pyrophosphate amidotransferase JBrowse link 14 33,580,541 33,614,919 RGD:1600115
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link 10 106,828,963 106,844,314 RGD:1600115
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 6 7,045,145 7,059,227 RGD:13792537
RGD:1600115
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link 16 72,216,326 72,228,098 RGD:13792537
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 16 72,232,852 72,291,227 RGD:13792537
G Kmo kynurenine 3-monooxygenase JBrowse link 13 93,684,324 93,715,378 RGD:1600115
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:1600115
'de novo' UMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhodh dihydroorotate dehydrogenase (quinone) JBrowse link 19 42,066,103 42,087,906 RGD:1600115
G Umps uridine monophosphate synthetase JBrowse link 11 70,034,181 70,044,590 RGD:1600115
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 JBrowse link 2 236,605,695 236,680,772 RGD:1624291
RGD:13792537
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 JBrowse link 1 251,145,264 251,230,716 RGD:13792537
3'-phosphoadenosine 5'-phosphosulfate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 JBrowse link 1 21,748,201 21,813,205 RGD:1624291
RGD:1600115
G LOC100910235 sulfotransferase 1C1-like JBrowse link 9 4,323,997 4,328,175 RGD:1624291
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:1624291
G Sult1b1 sulfotransferase family 1B member 1 JBrowse link 14 22,142,412 22,155,246 RGD:1624291
G Sult1e1 sulfotransferase family 1E member 1 JBrowse link 14 22,070,861 22,089,264 RGD:1624291
G Sult2a1 sulfotransferase family 2A member 1 JBrowse link 1 76,558,721 76,614,315 RGD:1624291
G Sult2b1 sulfotransferase family 2B member 1 JBrowse link 1 101,712,254 101,774,683 RGD:1624291
acetyl-CoA biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
G Acly ATP citrate lyase JBrowse link 10 88,392,248 88,442,845 RGD:631761
RGD:13792537
RGD:1600115
RGD:1624291
G Acss1 acyl-CoA synthetase short-chain family member 1 JBrowse link 3 146,420,346 146,470,293 RGD:1624291
G Acss2 acyl-CoA synthetase short-chain family member 2 JBrowse link 3 151,032,925 151,075,856 RGD:1624291
G Mlycd malonyl-CoA decarboxylase JBrowse link 19 52,032,950 52,048,773 RGD:1600790
RGD:13792537
RGD:1624291
RGD:1600115
G Ppcs phosphopantothenoylcysteine synthetase JBrowse link 5 138,466,298 138,470,108 RGD:1624291
acetyl-CoA biosynthetic process from acetate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acss1 acyl-CoA synthetase short-chain family member 1 JBrowse link 3 146,420,346 146,470,293 RGD:1600115
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlat dihydrolipoamide S-acetyltransferase JBrowse link 8 55,062,549 55,087,832 RGD:1599112
RGD:13792537
G Dld dihydrolipoamide dehydrogenase JBrowse link 6 50,597,677 50,618,694 RGD:1599112
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 JBrowse link X 37,329,779 37,343,410 RGD:1599112
RGD:13792537
RGD:1624291
RGD:1600115
G Pdha1l1 pyruvate dehydrogenase (lipoamide) alpha 1-like 1 JBrowse link 16 88,344,440 88,347,335 RGD:13792537
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 JBrowse link 2 246,736,449 246,737,997 RGD:1599112
RGD:13792537
G Pdhb pyruvate dehydrogenase E1 subunit beta JBrowse link 15 18,540,826 18,546,855 RGD:1599112
RGD:13792537
RGD:1624291
RGD:1600115
G Pdhx pyruvate dehydrogenase complex, component X JBrowse link 3 92,910,300 92,933,725 RGD:1600115
G Pdk4 pyruvate dehydrogenase kinase 4 JBrowse link 4 30,546,772 30,556,774 RGD:729541
acetyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
G Nudt7 nudix hydrolase 7 JBrowse link 19 46,455,745 46,470,070 RGD:1624291
acetyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acaa2 acetyl-CoA acyltransferase 2 JBrowse link 18 70,733,872 70,762,395 RGD:2317620
G Acaca acetyl-CoA carboxylase alpha JBrowse link 10 71,519,392 71,719,910 RGD:1600115
RGD:1624291
G Acacb acetyl-CoA carboxylase beta JBrowse link 12 48,127,149 48,238,969 RGD:1624291
G Acly ATP citrate lyase JBrowse link 10 88,392,248 88,442,845 RGD:2317315
G Acot12 acyl-CoA thioesterase 12 JBrowse link 2 20,857,056 20,901,656 RGD:1624291
RGD:1600115
G Cs citrate synthase JBrowse link 7 2,752,680 2,778,963 RGD:2306824
RGD:2306828
RGD:2306825
G Fasn fatty acid synthase JBrowse link 10 109,987,735 110,005,901 RGD:2317315
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 JBrowse link 2 52,427,351 52,445,082 RGD:13792537
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 JBrowse link 2 200,452,623 200,480,785 RGD:13792537
RGD:1624291
acyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadsb acyl-CoA dehydrogenase, short/branched chain JBrowse link 1 201,981,362 202,022,771 RGD:631739
G Acnat1 acyl-coenzyme A amino acid N-acyltransferase 1 JBrowse link 5 64,710,885 64,718,500 RGD:13792537
G Acnat2 acyl-coenzyme A amino acid N-acyltransferase 2 JBrowse link 5 64,669,998 64,674,250 RGD:1600115
RGD:13792537
G Acot1 acyl-CoA thioesterase 1 JBrowse link 6 107,485,088 107,493,082 RGD:1600115
RGD:1624291
RGD:13792537
G Acot11 acyl-CoA thioesterase 11 JBrowse link 5 126,347,478 126,395,655 RGD:13792537
G Acot12 acyl-CoA thioesterase 12 JBrowse link 2 20,857,056 20,901,656 RGD:633789
RGD:13792537
G Acot2 acyl-CoA thioesterase 2 JBrowse link 6 107,460,596 107,468,324 RGD:2315867
RGD:13792537
RGD:1624291
RGD:1600115
G Acot3 acyl-CoA thioesterase 3 JBrowse link 6 107,531,508 107,537,446 RGD:13792537
RGD:1624291
G Acot4 acyl-CoA thioesterase 4 JBrowse link 6 107,517,668 107,522,952 RGD:1624291
RGD:13792537
G Acot5 acyl-CoA thioesterase 5 JBrowse link 6 107,550,904 107,557,688 RGD:13792537
G Acot6 acyl-CoA thioesterase 6 JBrowse link 6 107,581,357 107,590,431 RGD:13792537
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:13792537
G Acot8 acyl-CoA thioesterase 8 JBrowse link 3 161,260,837 161,272,495 RGD:1624291
RGD:13792537
RGD:70235
RGD:1600115
G Acot9 acyl-CoA thioesterase 9 JBrowse link X 43,543,069 43,592,200 RGD:1624291
RGD:13792537
G Acsm2 acyl-CoA synthetase medium-chain family member 2 JBrowse link 1 189,289,957 189,329,007 RGD:13792537
G Acsm3 acyl-CoA synthetase medium-chain family member 3 JBrowse link 1 189,514,504 189,541,233 RGD:13792537
G Acsm4 acyl-CoA synthetase medium-chain family member 4 JBrowse link 1 189,432,604 189,458,799 RGD:1299602
RGD:13792537
G Acsm5 acyl-CoA synthetase medium-chain family member 5 JBrowse link 1 189,240,955 189,270,422 RGD:13792537
G Baat bile acid CoA:amino acid N-acyltransferase JBrowse link 5 64,768,397 64,777,368 RGD:1624291
RGD:13792537
G Dbi diazepam binding inhibitor, acyl-CoA binding protein JBrowse link 13 36,147,667 36,156,076 RGD:728881
G Dbil5 diazepam binding inhibitor-like 5 JBrowse link 10 64,375,926 64,376,938 RGD:61789
G Gcdh glutaryl-CoA dehydrogenase JBrowse link 19 26,000,497 26,006,970 RGD:1598697
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial JBrowse link 1 275,843,823 275,906,880 RGD:1624291
RGD:1600115
G Gpat4 glycerol-3-phosphate acyltransferase 4 JBrowse link 16 73,615,949 73,649,769 RGD:1624291
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase JBrowse link 5 154,294,841 154,308,582 RGD:1599519
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:1625002
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial JBrowse link 15 10,462,380 10,466,496 RGD:1624291
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 JBrowse link X 17,540,036 17,541,296 RGD:13792537
G Nudt11 nudix hydrolase 11 JBrowse link X 17,171,510 17,215,108 RGD:13792537
G Nudt3 nudix hydrolase 3 JBrowse link 20 7,155,744 7,208,292 RGD:13792537
G Nudt4 nudix hydrolase 4 JBrowse link 7 36,643,916 36,660,334 RGD:13792537
ADP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak1 adenylate kinase 1 JBrowse link 3 11,652,143 11,659,135 RGD:5134369
G Ak2 adenylate kinase 2 JBrowse link 5 147,185,474 147,204,050 RGD:5490208
RGD:1600115
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:5490208
RGD:1600115
RGD:5490216
G Ak4 adenylate kinase 4 JBrowse link 5 120,250,318 120,309,153 RGD:1600115
ADP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt9 nudix hydrolase 9 JBrowse link 14 7,036,809 7,054,739 RGD:1624291
ADP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link 1 175,585,301 175,630,479 RGD:1600115
RGD:1624291
G Bad BCL2-associated agonist of cell death JBrowse link 1 222,198,516 222,207,459 RGD:1624291
RGD:1600115
AMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adk adenosine kinase JBrowse link 15 3,033,535 3,435,888 RGD:1600115
G Adsl adenylosuccinate lyase JBrowse link 7 122,157,201 122,192,328 RGD:5135303
RGD:1624291
G Adss adenylosuccinate synthase JBrowse link 13 95,913,426 95,943,761 RGD:1624291
G Adssl1 adenylosuccinate synthase like 1 JBrowse link 6 137,184,818 137,206,694 RGD:1624291
G Prps1 phosphoribosyl pyrophosphate synthetase 1 JBrowse link X 111,798,233 111,820,270 RGD:5134985
G Prps2 phosphoribosyl pyrophosphate synthetase 2 JBrowse link X 28,435,275 28,472,882 RGD:5134985
AMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link 1 175,585,301 175,630,479 RGD:632203
G Nt5e 5' nucleotidase, ecto JBrowse link 8 95,969,002 96,012,733 RGD:5134346
RGD:13792537
RGD:1600115
RGD:1624291
AMP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak1 adenylate kinase 1 JBrowse link 3 11,652,143 11,659,135 RGD:5134369
G Ak2 adenylate kinase 2 JBrowse link 5 147,185,474 147,204,050 RGD:5490216
RGD:1600115
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:1624291
RGD:13792537
RGD:1600115
G Ak4 adenylate kinase 4 JBrowse link 5 120,250,318 120,309,153 RGD:1624291
RGD:13792537
G Ampd1 adenosine monophosphate deaminase 1 JBrowse link 2 205,568,934 205,589,961 RGD:13792537
G Ampd2 adenosine monophosphate deaminase 2 JBrowse link 2 210,861,624 210,874,348 RGD:1624291
RGD:13792537
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link 1 175,585,301 175,630,479 RGD:1600115
RGD:13792537
RGD:1624291
AMP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:2301093
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
RGD:13792537
AMP salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adk adenosine kinase JBrowse link 15 3,033,535 3,435,888 RGD:1600115
G Aprt adenine phosphoribosyl transferase JBrowse link 19 55,387,288 55,389,256 RGD:1600115
RGD:13792537
ATP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldoa aldolase, fructose-bisphosphate A JBrowse link 1 198,228,387 198,233,988 RGD:1624291
G Atp5f1a ATP synthase F1 subunit alpha JBrowse link 18 74,156,553 74,164,490 RGD:1624291
G Atp5f1b ATP synthase F1 subunit beta JBrowse link 7 2,504,708 2,511,748 RGD:1624291
G Atp5f1c ATP synthase F1 subunit gamma JBrowse link 17 72,209,321 72,231,562 RGD:13792537
G Atp5f1d ATP synthase F1 subunit delta JBrowse link 7 12,426,807 12,432,120 RGD:724594
G Atp5mc1 ATP synthase membrane subunit c locus 1 JBrowse link 10 83,895,941 83,898,640 RGD:13800744
G Atp5po ATP synthase peripheral stalk subunit OSCP JBrowse link 11 32,081,606 32,087,918 RGD:14696824
G Dguok deoxyguanosine kinase JBrowse link 4 115,180,433 115,208,061 RGD:15039296
G Dmac2l distal membrane arm assembly complex 2 like JBrowse link 6 92,057,782 92,076,022 RGD:1600115
G Ldhc lactate dehydrogenase C JBrowse link 1 102,914,875 102,931,843 RGD:1624291
RGD:1600115
G LOC686324 similar to Protein UNQ655/PRO1286 homolog precursor RGD:1600115
G Pklr pyruvate kinase L/R JBrowse link 2 188,449,158 188,458,034 RGD:2302789
RGD:2302790
G Pkm pyruvate kinase M1/2 JBrowse link 8 64,480,963 64,502,957 RGD:2302790
G Slc25a13 solute carrier family 25 member 13 JBrowse link 4 31,134,165 31,757,006 RGD:1624291
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
G Uqcc3 ubiquinol-cytochrome c reductase complex assembly factor 3 JBrowse link 1 225,076,301 225,077,079 RGD:1600115
ATP generation from ADP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
RGD:13792537
ATP synthesis coupled proton transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07064224.1 RGD:13792537
G AC105515.1 RGD:1600115
G Atp5f1a ATP synthase F1 subunit alpha JBrowse link 18 74,156,553 74,164,490 RGD:1600115
RGD:13792537
G Atp5f1c ATP synthase F1 subunit gamma JBrowse link 17 72,209,321 72,231,562 RGD:1600115
RGD:13792537
G Atp5f1d ATP synthase F1 subunit delta JBrowse link 7 12,426,807 12,432,120 RGD:724594
RGD:13792537
RGD:1600115
G Atp5mc1 ATP synthase membrane subunit c locus 1 JBrowse link 10 83,895,941 83,898,640 RGD:13792537
G Atp5mc2 ATP synthase membrane subunit c locus 2 JBrowse link 7 144,264,207 144,272,578 RGD:1600115
RGD:13792537
G Atp5mc3 ATP synthase membrane subunit c locus 3 JBrowse link 3 60,811,218 60,813,903 RGD:1600115
RGD:13792537
G Atp5mg ATP synthase membrane subunit g JBrowse link 8 49,220,441 49,227,273 RGD:13792537
G Atp5pb ATP synthase peripheral stalk-membrane subunit b JBrowse link 2 208,566,385 208,577,147 RGD:13792537
G Atp5pd ATP synthase peripheral stalk subunit d JBrowse link 10 103,967,340 103,972,552 RGD:13792537
G LOC100911417 ATP synthase subunit b, mitochondrial-like JBrowse link 2 208,408,890 208,420,159 RGD:13792537
G LOC500350 LRRGT00139 JBrowse link 4 170,347,410 170,382,370 RGD:13792537
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 JBrowse link MT 7,919 8,599 RGD:13792537
G Taf3 TATA-box binding protein associated factor 3 JBrowse link 17 72,240,785 72,393,448 RGD:1600115
benzoyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glyat glycine-N-acyltransferase JBrowse link 1 229,060,125 229,081,113 RGD:1624291
RGD:1600115
cAMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcy1 adenylate cyclase 1 JBrowse link 14 87,311,970 87,429,880 RGD:2312640
RGD:13792537
G Adcy10 adenylate cyclase 10 JBrowse link 13 83,701,952 83,787,010 RGD:1299450
RGD:1624291
RGD:2313177
RGD:2313173
RGD:2313171
G Adcy2 adenylate cyclase 2 JBrowse link 1 37,043,071 37,698,390 RGD:2312641
RGD:10400857
RGD:1600115
RGD:8553431
RGD:2312674
G Adcy3 adenylate cyclase 3 JBrowse link 6 28,570,941 28,648,848 RGD:2312674
RGD:13792537
RGD:1624291
RGD:1600115
RGD:10400870
G Adcy4 adenylate cyclase 4 JBrowse link 15 34,453,917 34,469,779 RGD:2312641
RGD:1600115
RGD:8554340
RGD:2312674
G Adcy5 adenylate cyclase 5 JBrowse link 11 68,695,839 68,842,452 RGD:2312641
RGD:13792537
RGD:1624291
RGD:1600115
RGD:2315006
RGD:2312674
G Adcy6 adenylate cyclase 6 JBrowse link 7 140,270,678 140,291,722 RGD:1598749
RGD:13792537
RGD:1600115
RGD:1624291
RGD:2315006
RGD:2313211
RGD:2312674
RGD:2312678
RGD:2312654
RGD:2312641
G Adcy7 adenylate cyclase 7 JBrowse link 19 19,702,307 19,762,973 RGD:2312674
RGD:1624291
G Adcy8 adenylate cyclase 8 JBrowse link 7 105,353,883 105,593,372 RGD:2312769
RGD:13792537
RGD:1600115
RGD:7241269
RGD:2312785
G Adcy9 adenylate cyclase 9 JBrowse link 10 11,392,698 11,515,406 RGD:2312785
RGD:1624291
cAMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde10a phosphodiesterase 10A JBrowse link 1 52,360,296 52,544,448 RGD:1600115
G Pde4a phosphodiesterase 4A JBrowse link 8 22,189,533 22,234,036 RGD:1600115
G Pde4b phosphodiesterase 4B JBrowse link 5 121,759,236 122,136,814 RGD:1600115
G Pde4c phosphodiesterase 4C JBrowse link 16 20,442,305 20,466,386 RGD:1600115
G Pde4d phosphodiesterase 4D JBrowse link 2 40,219,999 41,468,551 RGD:1600115
RGD:13792537
RGD:1624291
G Pde7a phosphodiesterase 7A JBrowse link 2 104,042,124 104,134,101 RGD:1600115
cAMP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 JBrowse link 3 37,950,846 38,211,478 RGD:1624291
G Epha2 Eph receptor A2 JBrowse link 5 159,845,773 159,874,203 RGD:1624291
canonical glycolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eno1 enolase 1 JBrowse link 5 167,288,223 167,299,610 RGD:2302788
RGD:1624291
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:2302788
G Foxk1 forkhead box K1 JBrowse link 12 14,183,436 14,244,634 RGD:1624291
G Foxk2 forkhead box K2 JBrowse link 10 110,468,905 110,518,854 RGD:1624291
G LOC100911625 gamma-enolase-like JBrowse link 9 20,251,564 20,260,465 RGD:2302788
G Pfkl phosphofructokinase, liver type JBrowse link 20 11,393,860 11,415,889 RGD:13792537
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1624291
RGD:13792537
RGD:1600115
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:13792537
CDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:5133253
RGD:13792537
CDP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
cGMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 JBrowse link 2 181,045,694 181,103,321 RGD:1624291
RGD:1600115
G Gucy1a2 guanylate cyclase 1 soluble subunit alpha 2 JBrowse link 8 408,001 899,851 RGD:1600115
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 JBrowse link 2 180,976,939 181,026,001 RGD:1624291
G Gucy1b2 guanylate cyclase 1 soluble subunit beta 2 JBrowse link 15 45,479,662 45,550,285 RGD:1600115
G Gucy2c guanylate cyclase 2C JBrowse link 4 170,659,993 170,740,274 RGD:13792537
G Gucy2d guanylate cyclase 2D, retinal JBrowse link 10 55,835,695 55,851,235 RGD:1624291
RGD:13792537
RGD:1600115
G Gucy2e guanylate cyclase 2E JBrowse link 1 163,398,891 163,433,594 RGD:15023466
RGD:13792537
G Gucy2f guanylate cyclase 2F JBrowse link X 113,372,240 113,474,210 RGD:13792537
G Gucy2g guanylate cyclase 2G JBrowse link 1 276,187,243 276,228,574 RGD:1600115
RGD:13792537
G Nppa natriuretic peptide A JBrowse link 5 164,808,407 164,809,716 RGD:1624291
RGD:13792537
G Nppb natriuretic peptide B JBrowse link 5 164,796,176 164,797,538 RGD:1624291
RGD:13792537
G Nppc natriuretic peptide C JBrowse link 9 93,731,436 93,735,636 RGD:1624291
RGD:13792537
G Npr1 natriuretic peptide receptor 1 JBrowse link 2 189,840,403 189,857,032 RGD:1624291
RGD:13792537
G Npr2 natriuretic peptide receptor 2 JBrowse link 5 59,128,186 59,147,321 RGD:1624291
RGD:13792537
cGMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde10a phosphodiesterase 10A JBrowse link 1 52,360,296 52,544,448 RGD:1600115
G Pde1a phosphodiesterase 1A JBrowse link 3 66,803,247 67,263,658 RGD:2312521
G Pde2a phosphodiesterase 2A JBrowse link 1 166,534,643 166,626,158 RGD:1600115
RGD:13792537
RGD:1624291
G Pde5a phosphodiesterase 5A JBrowse link 2 226,899,604 227,044,916 RGD:1624291
RGD:1600115
G Pde9a phosphodiesterase 9A JBrowse link 20 10,123,624 10,216,325 RGD:1600115
RGD:13792537
RGD:1624291
cGMP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 JBrowse link 4 145,704,779 145,948,997 RGD:1624291
G Pde5a phosphodiesterase 5A JBrowse link 2 226,899,604 227,044,916 RGD:1624291
G Pde9a phosphodiesterase 9A JBrowse link 20 10,123,624 10,216,325 RGD:1624291
RGD:1600115
G Rora RAR-related orphan receptor A JBrowse link 8 75,515,886 75,616,477 RGD:1624291
CMP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
coenzyme A biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:1624291
G Ak6 adenylate kinase 6 JBrowse link 2 30,664,407 30,676,464 RGD:1600115
G Coasy Coenzyme A synthase JBrowse link 10 88,992,413 88,996,677 RGD:1624291
RGD:13792537
G Dcakd dephospho-CoA kinase domain containing JBrowse link 10 91,095,601 91,126,733 RGD:13792537
G NEWGENE_1306267 phosphopantothenoylcysteine decarboxylase JBrowse link 8 62,086,821 62,109,164 RGD:13792537
G Pank1 pantothenate kinase 1 JBrowse link 1 253,115,400 253,189,643 RGD:1624291
RGD:13792537
G Pank2 pantothenate kinase 2 JBrowse link 3 123,807,911 123,841,797 RGD:1624291
RGD:13792537
G Pank3 pantothenate kinase 3 JBrowse link 10 20,591,432 20,615,258 RGD:1624291
RGD:13792537
G Pank4 pantothenate kinase 4 JBrowse link 5 172,367,593 172,384,077 RGD:13792537
RGD:1600115
G Ppcdc phosphopantothenoylcysteine decarboxylase JBrowse link 8 62,191,722 62,219,434 RGD:1624291
RGD:13792537
G Ppcs phosphopantothenoylcysteine synthetase JBrowse link 5 138,466,298 138,470,108 RGD:1624291
coenzyme A catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt7 nudix hydrolase 7 JBrowse link 19 46,455,745 46,470,070 RGD:1624291
RGD:13792537
coenzyme A metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
G Crot carnitine O-octanoyltransferase JBrowse link 4 22,079,837 22,116,265 RGD:1600115
RGD:1624291
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:1600115
G Mccc2 methylcrotonoyl-CoA carboxylase 2 JBrowse link 2 30,175,017 30,246,028 RGD:2316862
CTP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctps1 CTP synthase 1 JBrowse link 5 139,475,934 139,505,065 RGD:1624291
RGD:13792537
G Ctps2 CTP synthase 2 JBrowse link X 33,383,087 33,522,852 RGD:13792537
G Decr2 2,4-dienoyl-CoA reductase 2 JBrowse link 10 15,451,850 15,460,227 RGD:1600115
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 10 81,657,152 81,666,542 RGD:1600115
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 10 81,648,216 81,653,717 RGD:729254
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 JBrowse link 10 14,258,232 14,259,365 RGD:1600115
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 JBrowse link 10 15,461,567 15,465,422 RGD:1600115
G Nme5 NME/NM23 family member 5 JBrowse link 18 27,357,460 27,374,641 RGD:1600115
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 JBrowse link 8 117,920,912 117,928,148 RGD:1600115
G Nme7 NME/NM23 family member 7 JBrowse link 13 82,607,844 82,737,383 RGD:1600115
CTP salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Uck1 uridine-cytidine kinase 1 JBrowse link 3 11,271,874 11,277,757 RGD:1600115
G Uck2 uridine-cytidine kinase 2 JBrowse link 13 85,376,716 85,443,976 RGD:1600115
G Uckl1 uridine-cytidine kinase 1-like 1 JBrowse link 3 177,066,022 177,078,611 RGD:1600115
cyclic nucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase JBrowse link 10 88,490,798 88,497,357 RGD:1600115
cyclic purine nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd2 adenosine monophosphate deaminase 2 JBrowse link 2 210,861,624 210,874,348 RGD:1624291
RGD:1600115
dADP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt18 nudix hydrolase 18 JBrowse link 15 52,265,557 52,268,081 RGD:1624291
RGD:1600115
dADP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
dAMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dck deoxycytidine kinase JBrowse link 14 20,935,442 20,952,939 RGD:1600115
dAMP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
dATP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adk adenosine kinase JBrowse link 15 3,033,535 3,435,888 RGD:1624291
RGD:1600115
dATP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:1624291
G Nudt1 nudix hydrolase 1 JBrowse link 12 16,391,578 16,398,771 RGD:1624291
RGD:1600115
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 3 153,210,829 153,250,705 RGD:1624291
dATP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak2 adenylate kinase 2 JBrowse link 5 147,185,474 147,204,050 RGD:5490216
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:5490216
G Guk1 guanylate kinase 1 JBrowse link 10 45,535,617 45,552,455 RGD:5147877
G Oga O-GlcNAcase JBrowse link 1 265,506,752 265,542,452 RGD:2305953
dCDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:5133256
dCDP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
dCMP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
dCTP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dctpp1 dCTP pyrophosphatase 1 JBrowse link 1 198,703,459 198,706,852 RGD:1624291
RGD:13792537
RGD:1600115
deoxyribonucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100359539 ribonucleotide reductase M2 polypeptide JBrowse link 19 25,391,689 25,394,229 RGD:13792537
G Rrm1 ribonucleotide reductase catalytic subunit M1 JBrowse link 1 167,538,387 167,562,688 RGD:1624291
RGD:13792537
G Rrm2 ribonucleotide reductase regulatory subunit M2 JBrowse link 6 43,884,627 43,890,818 RGD:1624291
RGD:13792537
RGD:1600115
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B JBrowse link 7 76,750,045 76,780,817 RGD:1624291
RGD:13792537
deoxyribonucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dera deoxyribose-phosphate aldolase JBrowse link 4 171,748,254 171,826,414 RGD:13792537
G Nt5c 5', 3'-nucleotidase, cytosolic JBrowse link 10 104,052,807 104,054,805 RGD:1624291
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 3 153,210,829 153,250,705 RGD:1624291
deoxyribonucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rrm2 ribonucleotide reductase regulatory subunit M2 JBrowse link 6 43,884,627 43,890,818 RGD:1624291
G Tk2 thymidine kinase 2 JBrowse link 19 917,203 939,236 RGD:1624291
dGDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Guk1 guanylate kinase 1 JBrowse link 10 45,535,617 45,552,455 RGD:5147877
RGD:1624291
dGDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt18 nudix hydrolase 18 JBrowse link 15 52,265,557 52,268,081 RGD:1624291
RGD:1600115
dGDP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
RGD:13792537
dGMP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Guk1 guanylate kinase 1 JBrowse link 10 45,535,617 45,552,455 RGD:5147877
dGTP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt1 nudix hydrolase 1 JBrowse link 12 16,391,578 16,398,771 RGD:1624291
RGD:1600115
G Nudt15 nudix hydrolase 15 JBrowse link 15 55,417,774 55,456,698 RGD:1624291
RGD:13792537
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 3 153,210,829 153,250,705 RGD:1624291
RGD:13792537
dGTP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dguok deoxyguanosine kinase JBrowse link 4 115,180,433 115,208,061 RGD:1624291
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 JBrowse link X 17,540,036 17,541,296 RGD:13792537
G Nudt11 nudix hydrolase 11 JBrowse link X 17,171,510 17,215,108 RGD:13792537
G Nudt3 nudix hydrolase 3 JBrowse link 20 7,155,744 7,208,292 RGD:13792537
G Nudt4 nudix hydrolase 4 JBrowse link 7 36,643,916 36,660,334 RGD:13792537
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 JBrowse link X 17,540,036 17,541,296 RGD:13792537
G Nudt11 nudix hydrolase 11 JBrowse link X 17,171,510 17,215,108 RGD:13792537
G Nudt3 nudix hydrolase 3 JBrowse link 20 7,155,744 7,208,292 RGD:13792537
G Nudt4 nudix hydrolase 4 JBrowse link 7 36,643,916 36,660,334 RGD:13792537
diadenosine tetraphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gars glycyl-tRNA synthetase JBrowse link 4 85,235,122 85,276,085 RGD:1624291
RGD:1600115
G Kars lysyl-tRNA synthetase JBrowse link 19 44,212,205 44,231,209 RGD:2303395
RGD:13792537
RGD:1624291
RGD:12793003
RGD:2303396
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:12793003
diadenosine triphosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link 15 15,697,292 16,862,873 RGD:2289929
RGD:13792537
dITP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt16 nudix hydrolase 16 JBrowse link 8 113,673,069 113,675,124 RGD:1624291
dTDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk2 cytidine/uridine monophosphate kinase 2 JBrowse link 6 45,683,242 45,694,824 RGD:5133256
RGD:13792537
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:5133687
RGD:13792537
RGD:1624291
dTMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dctd dCMP deaminase JBrowse link 16 47,177,144 47,222,850 RGD:13792537
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:1545055
RGD:13792537
RGD:1624291
dTTP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk2 cytidine/uridine monophosphate kinase 2 JBrowse link 6 45,683,242 45,694,824 RGD:13792537
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:5133687
RGD:13792537
G Tbpl1 TATA-box binding protein like 1 JBrowse link 1 23,977,154 24,002,512 RGD:1624291
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:1600115
dTTP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dctpp1 dCTP pyrophosphatase 1 JBrowse link 1 198,703,459 198,706,852 RGD:1624291
dUDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:5133253
G Cmpk2 cytidine/uridine monophosphate kinase 2 JBrowse link 6 45,683,242 45,694,824 RGD:5133256
RGD:13792537
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:13792537
dUMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07001512.1 RGD:13792537
RGD:1600115
G Dctd dCMP deaminase JBrowse link 16 47,177,144 47,222,850 RGD:13792537
G Dut deoxyuridine triphosphatase JBrowse link 3 117,514,399 117,525,450 RGD:2300191
RGD:13792537
RGD:1600115
RGD:2301218
dUMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nt5m 5',3'-nucleotidase, mitochondrial JBrowse link 10 46,216,494 46,244,478 RGD:1624291
dUTP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07001512.1 RGD:13792537
G Dut deoxyuridine triphosphatase JBrowse link 3 117,514,399 117,525,450 RGD:2300191
RGD:13792537
RGD:2301218
FAD biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flad1 flavin adenine dinucleotide synthetase 1 JBrowse link 2 188,726,994 188,736,462 RGD:1600115
RGD:13792537
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gcdh glutaryl-CoA dehydrogenase JBrowse link 19 26,000,497 26,006,970 RGD:1598697
RGD:13792537
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
FMN biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rfk riboflavin kinase JBrowse link 1 236,494,221 236,501,733 RGD:13792537
GDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Guk1 guanylate kinase 1 JBrowse link 10 45,535,617 45,552,455 RGD:5147877
GDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt18 nudix hydrolase 18 JBrowse link 15 52,265,557 52,268,081 RGD:1624291
RGD:1600115
GDP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlgap2 DLG associated protein 2 JBrowse link 16 79,872,238 80,596,977 RGD:1600115
G Lrguk leucine-rich repeats and guanylate kinase domain containing JBrowse link 4 61,419,987 61,544,748 RGD:1600115
GDP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
GDP-L-fucose salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fcsk fucose kinase JBrowse link 19 43,338,146 43,357,826 RGD:1624291
RGD:13792537
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1624291
RGD:1600115
glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07005667.1 RGD:13792537
G AABR07006451.1 RGD:13792537
G AABR07013200.1 RGD:13792537
G AABR07021086.1 RGD:13792537
G AABR07022022.1 RGD:13792537
G AABR07024795.1 RGD:13792537
G AABR07025010.1 RGD:1600115
RGD:13792537
G AABR07028748.1 RGD:13792537
G AABR07029675.1 RGD:13792537
G AABR07030729.1 RGD:1600115
RGD:13792537
G AABR07032317.1 RGD:13792537
G AABR07032392.1 RGD:1600115
RGD:13792537
G AABR07034329.1 RGD:13792537
G AABR07034445.1 RGD:1600115
RGD:13792537
G AABR07040494.1 RGD:1600115
G AABR07041179.1 RGD:13792537
G AABR07045032.1 RGD:1600115
RGD:13792537
G AABR07052523.1 RGD:13792537
G AABR07053879.1 RGD:1600115
RGD:13792537
G AABR07067976.1 RGD:13792537
G AABR07068417.1 RGD:13792537
G AABR07070043.1 RGD:1600115
RGD:13792537
G AABR07071101.1 RGD:13792537
G AC094212.1 RGD:1600115
RGD:13792537
G AC107446.2 RGD:13792537
G AC110474.1 RGD:1600115
G AC110981.1 RGD:13792537
G Aldoa aldolase, fructose-bisphosphate A JBrowse link 1 198,228,387 198,233,988 RGD:1600115
RGD:1624291
RGD:13792537
G Aldoart2 aldolase 1 A retrogene 2 JBrowse link 6 76,349,362 76,351,052 RGD:1600115
RGD:13792537
G Aldob aldolase, fructose-bisphosphate B JBrowse link 5 64,805,772 64,818,813 RGD:2302804
RGD:13792537
RGD:1600115
RGD:1624291
G Aldoc aldolase, fructose-bisphosphate C JBrowse link 10 65,586,504 65,590,093 RGD:1600115
RGD:13792537
G Bpgm bisphosphoglycerate mutase JBrowse link 4 61,912,210 61,940,697 RGD:1600115
G Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 JBrowse link 17 76,306,585 76,358,058 RGD:1600115
G Eno1 enolase 1 JBrowse link 5 167,288,223 167,299,610 RGD:12792993
RGD:13792537
G Eno1-ps1 enolase 1, (alpha), pseudogene 1 JBrowse link 3 59,408,531 59,410,209 RGD:13792537
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:2302804
RGD:13792537
G Eno3 enolase 3 JBrowse link 10 57,278,271 57,283,661 RGD:1600115
RGD:13792537
G Eno4 enolase 4 JBrowse link 1 280,097,061 280,129,750 RGD:1624291
RGD:13792537
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link 4 157,676,336 157,680,322 RGD:2302804
RGD:13792537
RGD:13792662
RGD:1600115
G Gapdh-ps2 glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2 JBrowse link 16 25,773,573 25,774,863 RGD:1600115
RGD:13792537
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 1 89,180,063 89,195,347 RGD:1303349
RGD:13792537
RGD:1624291
RGD:1600115
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:2302790
RGD:1600115
RGD:13792537
RGD:2302851
G Gpi glucose-6-phosphate isomerase JBrowse link 1 90,063,411 90,091,287 RGD:1600115
RGD:13792537
RGD:1624291
G Hk1 hexokinase 1 JBrowse link 20 31,911,460 31,979,780 RGD:1358232
RGD:1600115
RGD:13792537
RGD:2302851
RGD:2302804
G Hk2 hexokinase 2 JBrowse link 4 113,559,396 113,609,897 RGD:13792537
RGD:1600115
G Hk3 hexokinase 3 JBrowse link 17 10,134,726 10,152,976 RGD:13792537
RGD:1600115
G LOC100362738 M2 pyruvate kinase-like JBrowse link 20 18,058,221 18,060,409 RGD:1600115
RGD:13792537
G LOC100911515 triosephosphate isomerase-like JBrowse link 9 20,213,596 20,217,279 RGD:1600115
G LOC100911625 gamma-enolase-like JBrowse link 9 20,251,564 20,260,465 RGD:13792537
G LOC103693780 2-oxoglutarate dehydrogenase, mitochondrial-like JBrowse link 14 86,599,906 86,614,963 RGD:1600115
G LOC108349792 glyceraldehyde-3-phosphate dehydrogenase pseudogene JBrowse link 1 234,180,062 234,186,813 RGD:13792537
G LOC108351137 glyceraldehyde-3-phosphate dehydrogenase JBrowse link 5 115,649,077 115,650,141 RGD:1600115
RGD:13792537
G LOC108351683 glyceraldehyde-3-phosphate dehydrogenase pseudogene JBrowse link 8 45,561,393 45,562,483 RGD:1600115
RGD:13792537
G LOC108352348 glyceraldehyde-3-phosphate dehydrogenase pseudogene JBrowse link 11 72,108,963 72,110,027 RGD:1600115
RGD:13792537
G LOC303448 similar to glyceraldehyde-3-phosphate dehydrogenase JBrowse link 10 78,687,653 78,696,097 RGD:13792537
G LOC691137 hypothetical protein LOC691137 JBrowse link 10 110,437,862 110,438,803 RGD:1600115
G Ogdh oxoglutarate dehydrogenase JBrowse link 14 86,414,924 86,481,903 RGD:1600115
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 JBrowse link 13 47,413,453 47,440,682 RGD:1624291
RGD:1600115
G Pfkl phosphofructokinase, liver type JBrowse link 20 11,393,860 11,415,889 RGD:2301239
RGD:1624291
RGD:2302851
RGD:2302790
RGD:2302736
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1599363
RGD:1624291
RGD:2302736
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:2302736
RGD:2302804
G Pgam1 phosphoglycerate mutase 1 JBrowse link 1 261,158,204 261,165,814 RGD:1624291
G Pgam2 phosphoglycerate mutase 2 JBrowse link 14 86,045,005 86,047,116 RGD:1624291
G Pgk1 phosphoglycerate kinase 1 JBrowse link X 77,263,399 77,279,373 RGD:2302859
RGD:13792537
RGD:1600115
RGD:1624291
RGD:2302860
G Pgk2 phosphoglycerate kinase 2 JBrowse link 9 24,095,774 24,097,340 RGD:1624291
RGD:13792537
RGD:1600115
G Pklr pyruvate kinase L/R JBrowse link 2 188,449,158 188,458,034 RGD:2302790
RGD:13792537
RGD:1600115
RGD:2302851
G Pkm pyruvate kinase M1/2 JBrowse link 8 64,480,963 64,502,957 RGD:2302790
RGD:13792537
RGD:1624291
RGD:12793012
RGD:1600115
RGD:2302804
G Pkm_v1 pyruvate kinase M1/2, variant 1 RGD:1600115
RGD:13792537
RGD:12793012
G Pkm_v2 pyruvate kinase M1/2, variant 2 RGD:1600115
RGD:13792537
RGD:12793012
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 JBrowse link 9 81,999,368 82,008,620 RGD:1624291
G RGD1559534 similar to Alpha enolase (2-phospho-D-glycerate hydro-lyase) JBrowse link 10 44,658,634 44,662,983 RGD:13792537
G RGD1560402 similar to Phosphoglycerate kinase 1 JBrowse link 2 42,726,747 42,728,100 RGD:1600115
RGD:13792537
G RGD1560826 similar to glyceraldehyde-3-phosphate dehydrogenase JBrowse link 2 226,825,623 226,826,642 RGD:13792537
G Tpi1 triosephosphate isomerase 1 JBrowse link 4 157,328,375 157,331,905 RGD:1599585
RGD:13792537
RGD:1600115
glycolytic process from galactose term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Galk1 galactokinase 1 JBrowse link 10 104,560,322 104,564,499 RGD:1624291
G Galt galactose-1-phosphate uridylyltransferase JBrowse link 5 58,144,679 58,147,946 RGD:1624291
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pfkl phosphofructokinase, liver type JBrowse link 20 11,393,860 11,415,889 RGD:1624291
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:1600115
RGD:1624291
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:1600115
GMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gmps guanine monophosphate synthase JBrowse link 2 154,555,967 154,590,662 RGD:1599004
RGD:1624291
RGD:13792537
RGD:1600115
G Impdh1 inosine monophosphate dehydrogenase 1 JBrowse link 4 56,478,383 56,493,987 RGD:1600115
G Impdh2 inosine monophosphate dehydrogenase 2 JBrowse link 8 117,346,983 117,351,619 RGD:1600115
GMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
RGD:1600115
G LOC103689983 hypoxanthine-guanine phosphoribosyltransferase JBrowse link X 158,623,231 158,655,277 RGD:1600115
G Prtfdc1 phosphoribosyl transferase domain containing 1 JBrowse link 17 87,926,242 88,037,040 RGD:1624291
GMP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlgap2 DLG associated protein 2 JBrowse link 16 79,872,238 80,596,977 RGD:1600115
G Gmpr2 guanosine monophosphate reductase 2 JBrowse link 15 34,352,857 34,362,074 RGD:1624291
G Guk1 guanylate kinase 1 JBrowse link 10 45,535,617 45,552,455 RGD:5147867
G Lrguk leucine-rich repeats and guanylate kinase domain containing JBrowse link 4 61,419,987 61,544,748 RGD:1600115
GMP salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:13792537
G LOC103689983 hypoxanthine-guanine phosphoribosyltransferase JBrowse link X 158,623,231 158,655,277 RGD:13792537
GTP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Decr2 2,4-dienoyl-CoA reductase 2 JBrowse link 10 15,451,850 15,460,227 RGD:1600115
G Impdh1 inosine monophosphate dehydrogenase 1 JBrowse link 4 56,478,383 56,493,987 RGD:13792537
G Impdh2 inosine monophosphate dehydrogenase 2 JBrowse link 8 117,346,983 117,351,619 RGD:13792537
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 10 81,657,152 81,666,542 RGD:1600115
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 10 81,648,216 81,653,717 RGD:729254
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 JBrowse link 10 14,258,232 14,259,365 RGD:1600115
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 JBrowse link 10 15,461,567 15,465,422 RGD:1600115
G Nme5 NME/NM23 family member 5 JBrowse link 18 27,357,460 27,374,641 RGD:1600115
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 JBrowse link 8 117,920,912 117,928,148 RGD:1600115
G Nme7 NME/NM23 family member 7 JBrowse link 13 82,607,844 82,737,383 RGD:1600115
GTP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:1624291
RGD:1600115
G Ak4 adenylate kinase 4 JBrowse link 5 120,250,318 120,309,153 RGD:1624291
G Ampd2 adenosine monophosphate deaminase 2 JBrowse link 2 210,861,624 210,874,348 RGD:1624291
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link 1 175,585,301 175,630,479 RGD:1600115
RGD:1624291
G Efl1 elongation factor like GTPase 1 JBrowse link 1 144,601,425 144,740,634 RGD:1624291
G Gimap7 GTPase, IMAP family member 7 JBrowse link 4 78,354,335 78,358,505 RGD:1624291
G Gnai3 G protein subunit alpha i3 JBrowse link 2 210,896,779 210,934,733 RGD:1624291
RGD:1600115
G Gtpbp1 GTP binding protein 1 JBrowse link 7 120,923,274 120,947,723 RGD:8553842
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
G Mfn1 mitofusin 1 JBrowse link 2 118,929,738 118,971,689 RGD:1624291
RGD:1600115
G Opa1 OPA1, mitochondrial dynamin like GTPase JBrowse link 11 74,717,600 74,793,902 RGD:1624291
RGD:1600115
G Rab23 RAB23, member RAS oncogene family JBrowse link 9 38,469,784 38,496,185 RGD:1624291
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,324,105 RGD:1600115
RGD:1624291
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:7248703
G Rhoq ras homolog family member Q JBrowse link 6 10,533,151 10,568,582 RGD:1624291
guanine deglycation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
guanine deglycation, glyoxal removal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
RGD:13792537
guanine deglycation, methylglyoxal removal term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
IDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt16 nudix hydrolase 16 JBrowse link 8 113,673,069 113,675,124 RGD:1624291
G Nudt9 nudix hydrolase 9 JBrowse link 14 7,036,809 7,054,739 RGD:1624291
IMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd1 adenosine monophosphate deaminase 1 JBrowse link 2 205,568,934 205,589,961 RGD:13792537
G Ampd2 adenosine monophosphate deaminase 2 JBrowse link 2 210,861,624 210,874,348 RGD:1624291
RGD:13792537
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link 1 175,585,301 175,630,479 RGD:1624291
RGD:13792537
IMP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adss adenylosuccinate synthase JBrowse link 13 95,913,426 95,943,761 RGD:5135533
RGD:13792537
G Adssl1 adenylosuccinate synthase like 1 JBrowse link 6 137,184,818 137,206,694 RGD:5135303
RGD:13792537
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
RGD:1600115
G LOC103689983 hypoxanthine-guanine phosphoribosyltransferase JBrowse link X 158,623,231 158,655,277 RGD:1600115
G Nt5c2 5'-nucleotidase, cytosolic II JBrowse link 1 266,652,966 266,782,935 RGD:2317226
RGD:13792537
IMP salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd1 adenosine monophosphate deaminase 1 JBrowse link 2 205,568,934 205,589,961 RGD:1600115
G Ampd2 adenosine monophosphate deaminase 2 JBrowse link 2 210,861,624 210,874,348 RGD:1600115
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link 1 175,585,301 175,630,479 RGD:1600115
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1600115
RGD:13792537
G LOC103689983 hypoxanthine-guanine phosphoribosyltransferase JBrowse link X 158,623,231 158,655,277 RGD:1600115
RGD:13792537
G Prtfdc1 phosphoribosyl transferase domain containing 1 JBrowse link 17 87,926,242 88,037,040 RGD:1600115
isopentenyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mvd mevalonate diphosphate decarboxylase JBrowse link 19 55,258,910 55,268,933 RGD:2316852
RGD:13792537
G Mvk mevalonate kinase JBrowse link 12 47,904,266 47,920,457 RGD:2316852
RGD:13792537
RGD:1600115
G Pmvk phosphomevalonate kinase JBrowse link 2 188,784,329 188,793,890 RGD:2316852
RGD:13792537
RGD:1600115
ITP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itpa inosine triphosphatase JBrowse link 3 123,209,611 123,221,266 RGD:1624291
ITP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:1624291
RGD:1600115
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pipox pipecolic acid and sarcosine oxidase JBrowse link 10 64,951,986 64,964,865 RGD:1624291
RGD:13792537
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aadat aminoadipate aminotransferase JBrowse link 16 32,832,001 32,868,680 RGD:1600115
G Aass aminoadipate-semialdehyde synthase JBrowse link 4 50,152,005 50,208,935 RGD:1600115
G Dlst dihydrolipoamide S-succinyltransferase JBrowse link 6 108,936,534 108,961,322 RGD:1600115
L-methylmalonyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcee methylmalonyl CoA epimerase JBrowse link 1 125,229,487 125,252,692 RGD:1624291
RGD:13792537
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsl1 acyl-CoA synthetase long-chain family member 1 JBrowse link 16 48,937,456 49,003,898 RGD:2312800
RGD:13792537
G Acsl4 acyl-CoA synthetase long-chain family member 4 JBrowse link X 113,596,247 113,660,024 RGD:2312800
G Acsl5 acyl-CoA synthetase long-chain family member 5 JBrowse link 1 276,240,703 276,290,012 RGD:2312800
RGD:13792537
G Acsl6 acyl-CoA synthetase long-chain family member 6 JBrowse link 10 39,654,771 39,717,592 RGD:2312800
RGD:13792537
G Elovl1 ELOVL fatty acid elongase 1 JBrowse link 5 137,255,868 137,260,486 RGD:1600115
G Elovl3 ELOVL fatty acid elongase 3 JBrowse link 1 265,883,353 265,887,181 RGD:1600115
G Elovl4 ELOVL fatty acid elongase 4 JBrowse link 8 91,310,690 91,338,625 RGD:1600115
G Elovl5 ELOVL fatty acid elongase 5 JBrowse link 8 85,220,941 85,287,449 RGD:1600115
G Elovl6 ELOVL fatty acid elongase 6 JBrowse link 2 234,187,490 234,296,124 RGD:1600115
G Elovl7 ELOVL fatty acid elongase 7 JBrowse link 2 40,373,211 40,386,643 RGD:1600115
G LOC102549542 elongation of very long chain fatty acids protein 6-like JBrowse link 2 234,375,172 234,486,639 RGD:1600115
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:1624291
long-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsl3 acyl-CoA synthetase long-chain family member 3 JBrowse link 9 84,569,601 84,593,565 RGD:13792537
G Acsl4 acyl-CoA synthetase long-chain family member 4 JBrowse link X 113,596,247 113,660,024 RGD:13792537
G Dgat1 diacylglycerol O-acyltransferase 1 JBrowse link 7 117,566,363 117,576,735 RGD:1624291
RGD:1600115
G Dgat2 diacylglycerol O-acyltransferase 2 JBrowse link 1 164,113,459 164,143,818 RGD:1624291
G Far1 fatty acyl CoA reductase 1 JBrowse link 1 178,351,674 178,412,838 RGD:1600115
RGD:13792537
RGD:1624291
G Far2 fatty acyl CoA reductase 2 JBrowse link 4 182,446,400 182,563,485 RGD:1624291
RGD:13792537
G Them5 thioesterase superfamily member 5 JBrowse link 2 195,582,781 195,588,000 RGD:1624291
RGD:13792537
malonyl-CoA biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acaca acetyl-CoA carboxylase alpha JBrowse link 10 71,519,392 71,719,910 RGD:1600115
G Acacb acetyl-CoA carboxylase beta JBrowse link 12 48,127,149 48,238,969 RGD:1624291
malonyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mlycd malonyl-CoA decarboxylase JBrowse link 19 52,032,950 52,048,773 RGD:1624291
RGD:13792537
RGD:1600115
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot7 acyl-CoA thioesterase 7 JBrowse link 5 169,357,582 169,450,215 RGD:1624291
medium-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsm2 acyl-CoA synthetase medium-chain family member 2 JBrowse link 1 189,289,957 189,329,007 RGD:1624291
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 JBrowse link 18 44,810,462 44,897,677 RGD:1624291
RGD:1600115
mitochondrial acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mpc1 mitochondrial pyruvate carrier 1 JBrowse link 1 53,026,608 53,038,229 RGD:1624291
G Mpc2 mitochondrial pyruvate carrier 2 JBrowse link 13 83,680,527 83,700,491 RGD:1624291
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 JBrowse link X 37,329,779 37,343,410 RGD:1624291
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC096404.1 RGD:13792537
G Atp5f1a ATP synthase F1 subunit alpha JBrowse link 18 74,156,553 74,164,490 RGD:1624291
G Atp5f1b ATP synthase F1 subunit beta JBrowse link 7 2,504,708 2,511,748 RGD:13792537
RGD:1624291
RGD:1600115
G Atp5f1c ATP synthase F1 subunit gamma JBrowse link 17 72,209,321 72,231,562 RGD:1624291
G Atp5f1d ATP synthase F1 subunit delta JBrowse link 7 12,426,807 12,432,120 RGD:1600115
RGD:1624291
G Atp5f1e ATP synthase F1 subunit epsilon JBrowse link 3 172,563,105 172,566,007 RGD:1624291
G Atp5me ATP synthase membrane subunit e JBrowse link 14 2,325,308 2,326,436 RGD:1624291
G Atp5mf ATP synthase membrane subunit f JBrowse link 12 11,191,799 11,198,369 RGD:1624291
G Atp5mg ATP synthase membrane subunit g JBrowse link 8 49,220,441 49,227,273 RGD:1624291
G Atp5pb ATP synthase peripheral stalk-membrane subunit b JBrowse link 2 208,566,385 208,577,147 RGD:1624291
G Atp5pd ATP synthase peripheral stalk subunit d JBrowse link 10 103,967,340 103,972,552 RGD:1624291
G Atp5pf ATP synthase peripheral stalk subunit F6 JBrowse link 11 24,286,806 24,294,419 RGD:1624291
G Atp5po ATP synthase peripheral stalk subunit OSCP JBrowse link 11 32,081,606 32,087,918 RGD:1624291
G Cox5b cytochrome c oxidase subunit 5B JBrowse link 9 43,259,706 43,262,039 RGD:13792537
G Cyc1 cytochrome c-1 JBrowse link 7 117,409,576 117,411,953 RGD:13792537
G Mt-atp6 mitochondrially encoded ATP synthase membrane subunit 6 JBrowse link MT 7,919 8,599 RGD:1624291
G Mt-atp8 mitochondrially encoded ATP synthase membrane subunit 8 JBrowse link MT 7,758 7,961 RGD:1624291
G Stoml2 stomatin like 2 JBrowse link 5 58,472,561 58,476,158 RGD:1624291
RGD:1600115
NAD biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link 10 106,828,963 106,844,314 RGD:13792537
G Aspdh aspartate dehydrogenase domain containing JBrowse link 1 100,471,066 100,473,327 RGD:1600115
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 6 7,045,145 7,059,227 RGD:1624291
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:1600115
RGD:1624291
G Nadsyn1 NAD synthetase 1 JBrowse link 1 216,985,710 217,013,743 RGD:1600115
RGD:13792537
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 6 52,122,085 52,156,473 RGD:1624291
RGD:1600115
G Naprt nicotinate phosphoribosyltransferase JBrowse link 7 116,922,979 116,926,436 RGD:2289495
RGD:13792537
RGD:1600115
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 5 166,409,460 166,430,291 RGD:1600115
RGD:1624291
RGD:13792537
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 JBrowse link 13 70,379,346 70,559,311 RGD:13782043
RGD:13792537
RGD:1600115
G Nmnat3 nicotinamide nucleotide adenylyltransferase 3 JBrowse link 8 106,317,038 106,429,535 RGD:1624291
RGD:13792537
RGD:1600115
G Nmrk1 nicotinamide riboside kinase 1 JBrowse link 1 234,721,992 234,749,452 RGD:1600115
G Qprt quinolinate phosphoribosyltransferase JBrowse link 1 198,544,262 198,559,556 RGD:2289495
RGD:13792537
RGD:1600115
NAD catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Art2b ADP-ribosyltransferase 2b JBrowse link 1 166,665,029 166,685,097 RGD:1600115
G Nudt12 nudix hydrolase 12 JBrowse link 9 105,680,603 105,693,374 RGD:1624291
RGD:13792537
G Nudt17 nudix hydrolase 17 JBrowse link 2 198,831,546 198,836,191 RGD:13792537
G Sarm1 sterile alpha and TIR motif containing 1 JBrowse link 10 65,742,343 65,766,050 RGD:1624291
NAD salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naprt nicotinate phosphoribosyltransferase JBrowse link 7 116,922,979 116,926,436 RGD:13792537
NADP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:1624291
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 JBrowse link 1 141,874,354 141,893,674 RGD:11522736
G Nadk NAD kinase JBrowse link 5 172,984,930 173,015,505 RGD:13703105
RGD:13792537
G Nadk2 NAD kinase 2, mitochondrial JBrowse link 2 58,462,588 58,504,735 RGD:1600115
NADP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt12 nudix hydrolase 12 JBrowse link 9 105,680,603 105,693,374 RGD:1624291
RGD:13792537
G Nudt13 nudix hydrolase 13 JBrowse link 15 4,434,341 4,454,871 RGD:1624291
G Nudt17 nudix hydrolase 17 JBrowse link 2 198,831,546 198,836,191 RGD:13792537
negative regulation of ATP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 JBrowse link 1 259,692,020 259,818,922 RGD:9685453
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:1624291
RGD:1600115
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:1624291
G Pid1 phosphotyrosine interaction domain containing 1 JBrowse link 9 91,667,748 91,683,468 RGD:1624291
negative regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 JBrowse link 19 55,438,409 55,510,652 RGD:1624291
G Ddit4 DNA-damage-inducible transcript 4 JBrowse link 20 29,509,283 29,511,382 RGD:1624291
RGD:1600115
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:1600115
RGD:1624291
G Hdac4 histone deacetylase 4 JBrowse link 9 99,052,945 99,299,715 RGD:1624291
G Ier3 immediate early response 3 JBrowse link 20 3,438,798 3,440,002 RGD:1624291
G Mtch2 mitochondrial carrier 2 JBrowse link 3 79,678,141 79,695,356 RGD:1624291
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:9686132
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 10 48,629,121 48,772,890 RGD:1624291
RGD:1600115
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link 1 194,767,484 194,769,519 RGD:1600115
RGD:1624291
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:1624291
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:7242186
G Sirt6 sirtuin 6 JBrowse link 7 10,937,622 10,943,048 RGD:1624291
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:1624291
G Tigar TP53 induced glycolysis regulatory phosphatase JBrowse link 4 159,635,145 159,654,108 RGD:1624291
RGD:13792537
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) JBrowse link 10 90,296,144 90,312,401 RGD:1624291
RGD:1600115
negative regulation of guanylate cyclase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hpca hippocalcin JBrowse link 5 147,295,124 147,305,757 RGD:9686438
G Pdzd3 PDZ domain containing 3 JBrowse link 8 48,577,905 48,582,353 RGD:1600115
G Rd3 retinal degeneration 3, GUCY2D regulator JBrowse link 13 110,739,645 110,749,167 RGD:1624291
negative regulation of nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cda cytidine deaminase JBrowse link 5 156,703,579 156,734,541 RGD:1624291
nicotinamide nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naxd NAD(P)HX dehydratase JBrowse link 16 83,326,228 83,342,711 RGD:1600115
G Naxe NAD(P)HX epimerase JBrowse link 2 187,424,319 187,426,410 RGD:1624291
nucleoside diphosphate phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07051450.1 RGD:13792537
G Ak1 adenylate kinase 1 JBrowse link 3 11,652,143 11,659,135 RGD:1624291
RGD:13792537
RGD:1600115
G Ak4 adenylate kinase 4 JBrowse link 5 120,250,318 120,309,153 RGD:1624291
RGD:13792537
RGD:1600115
G Ak5 adenylate kinase 5 JBrowse link 2 257,671,772 257,864,385 RGD:1624291
RGD:13792537
G Ak7 adenylate kinase 7 JBrowse link 6 129,538,648 129,606,960 RGD:1624291
RGD:13792537
G Ak8 adenylate kinase 8 JBrowse link 3 7,279,429 7,394,509 RGD:1624291
RGD:13792537
RGD:1600115
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:1600115
RGD:1624291
G Cmpk2 cytidine/uridine monophosphate kinase 2 JBrowse link 6 45,683,242 45,694,824 RGD:1624291
G Decr2 2,4-dienoyl-CoA reductase 2 JBrowse link 10 15,451,850 15,460,227 RGD:1600115
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:1600115
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 10 81,657,152 81,666,542 RGD:70281
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 10 81,648,216 81,653,717 RGD:2299082
RGD:1624291
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 JBrowse link 10 14,258,232 14,259,365 RGD:1600115
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 JBrowse link 10 15,461,567 15,465,422 RGD:1600115
G Nme5 NME/NM23 family member 5 JBrowse link 18 27,357,460 27,374,641 RGD:1600115
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 JBrowse link 8 117,920,912 117,928,148 RGD:1600115
G Nme7 NME/NM23 family member 7 JBrowse link 13 82,607,844 82,737,383 RGD:1600115
G Pck1 phosphoenolpyruvate carboxykinase 1 JBrowse link 3 171,213,936 171,219,885 RGD:1600115
nucleoside monophosphate phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07051450.1 RGD:1600115
G Ak1 adenylate kinase 1 JBrowse link 3 11,652,143 11,659,135 RGD:1600115
G Ak2 adenylate kinase 2 JBrowse link 5 147,185,474 147,204,050 RGD:1600115
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:1600115
G Ak4 adenylate kinase 4 JBrowse link 5 120,250,318 120,309,153 RGD:1600115
G Ak5 adenylate kinase 5 JBrowse link 2 257,671,772 257,864,385 RGD:1600115
G Ak6 adenylate kinase 6 JBrowse link 2 30,664,407 30,676,464 RGD:1600115
G Ak7 adenylate kinase 7 JBrowse link 6 129,538,648 129,606,960 RGD:1600115
G Ak8 adenylate kinase 8 JBrowse link 3 7,279,429 7,394,509 RGD:1600115
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:1600115
G Cmpk2 cytidine/uridine monophosphate kinase 2 JBrowse link 6 45,683,242 45,694,824 RGD:1600115
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:1600115
G Pnkp polynucleotide kinase 3'-phosphatase JBrowse link 1 100,853,475 100,859,202 RGD:1600115
G Rad50 RAD50 double strand break repair protein JBrowse link 10 39,002,130 39,054,042 RGD:1600115
nucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dtymk deoxythymidylate kinase JBrowse link 9 100,921,565 100,930,399 RGD:1624291
G LOC100910245 ribose-phosphate pyrophosphokinase 2-like JBrowse link X 29,157,349 29,176,858 RGD:13792537
G LOC314140 ribose-phosphate pyrophosphokinase I -like JBrowse link 6 78,172,762 78,181,608 RGD:13792537
G Pnp purine nucleoside phosphorylase JBrowse link 15 27,875,883 27,883,566 RGD:1624291
G Prps1 phosphoribosyl pyrophosphate synthetase 1 JBrowse link X 111,798,233 111,820,270 RGD:1599724
RGD:13792537
G Prps1l1 phosphoribosyl pyrophosphate synthetase 1-like 1 JBrowse link 6 54,417,903 54,419,593 RGD:13792537
G Prps2 phosphoribosyl pyrophosphate synthetase 2 JBrowse link X 28,435,275 28,472,882 RGD:1599724
RGD:13792537
G Prpsap1 phosphoribosyl pyrophosphate synthetase-associated protein 1 JBrowse link 10 105,430,516 105,492,154 RGD:729478
RGD:13792537
RGD:1600115
G Prpsap2 phosphoribosyl pyrophosphate synthetase-associated protein 2 JBrowse link 10 48,008,799 48,044,435 RGD:1600115
RGD:13792537
G Uck2 uridine-cytidine kinase 2 JBrowse link 13 85,376,716 85,443,976 RGD:1600115
nucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upp1 uridine phosphorylase 1 JBrowse link 14 89,314,234 89,334,060 RGD:1600115
G Upp2 uridine phosphorylase 2 JBrowse link 3 44,806,106 44,846,464 RGD:1600115
positive regulation of ATP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Eno1 enolase 1 JBrowse link 5 167,288,223 167,299,610 RGD:1624291
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:1624291
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:12793039
G Mt-co2 mitochondrially encoded cytochrome c oxidase II JBrowse link MT 7,006 7,689 RGD:13506652
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:7240532
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 JBrowse link 1 162,369,801 162,376,024 RGD:11040458
G Pid1 phosphotyrosine interaction domain containing 1 JBrowse link 9 91,667,748 91,683,468 RGD:1624291
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:10413842
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:1624291
G Slc25a12 solute carrier family 25 member 12 JBrowse link 3 57,881,951 57,998,214 RGD:13628741
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:8694322
G Taz tafazzin JBrowse link X 156,421,006 156,429,461 RGD:13432160
G Tmsb4x thymosin beta 4, X-linked JBrowse link X 28,593,405 28,617,267 RGD:1624291
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
positive regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 JBrowse link 6 108,087,677 108,123,811 RGD:1624291
RGD:1600115
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:12910990
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:2301905
G Gpd1 glycerol-3-phosphate dehydrogenase 1 JBrowse link 7 141,368,928 141,377,931 RGD:1624291
G Htr2a 5-hydroxytryptamine receptor 2A JBrowse link 15 56,666,152 56,732,469 RGD:1624291
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:1624291
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:1624291
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:1624291
RGD:1600115
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1642010
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:1624291
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:7207891
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:1624291
RGD:1600115
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:8554193
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link 5 124,568,845 124,642,569 RGD:8554193
G Prxl2c peroxiredoxin like 2C JBrowse link 17 1,798,224 1,830,011 RGD:1624291
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
G Slc4a4 solute carrier family 4 member 4 JBrowse link 14 20,476,258 20,817,042 RGD:1624291
RGD:1600115
G Zbtb20 zinc finger and BTB domain containing 20 JBrowse link 11 62,014,925 62,561,113 RGD:1624291
positive regulation of guanylate cyclase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adora2b adenosine A2B receptor JBrowse link 10 48,569,563 48,586,366 RGD:1624291
RGD:1600115
G Guca1a guanylate cyclase activator 1A JBrowse link 9 15,609,804 15,620,030 RGD:1599357
G Guca1b guanylate cyclase activator 1B JBrowse link 9 15,621,083 15,629,017 RGD:1600115
G Guca2a guanylate cyclase activator 2A JBrowse link 5 138,685,634 138,687,476 RGD:1600115
G Guca2b guanylate cyclase activator 2B JBrowse link 5 138,695,591 138,697,641 RGD:1600115
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:13792537
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:13792537
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:1624291
RGD:13792537
RGD:1600115
positive regulation of proton-transporting ATP synthase activity, rotational mechanism term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase JBrowse link 2 84,678,892 84,694,152 RGD:1600115
RGD:1624291
G Tmsb4x thymosin beta 4, X-linked JBrowse link X 28,593,405 28,617,267 RGD:1624291
propionyl-CoA biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acat1 acetyl-CoA acetyltransferase 1 JBrowse link 8 58,166,990 58,195,884 RGD:1624291
purine nucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adss adenylosuccinate synthase JBrowse link 13 95,913,426 95,943,761 RGD:1624291
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase JBrowse link 11 31,780,477 31,805,728 RGD:13792537
G Hprt1 hypoxanthine phosphoribosyltransferase 1 JBrowse link X 158,196,640 158,228,815 RGD:1624291
G Impdh1 inosine monophosphate dehydrogenase 1 JBrowse link 4 56,478,383 56,493,987 RGD:1624291
G Impdh2 inosine monophosphate dehydrogenase 2 JBrowse link 8 117,346,983 117,351,619 RGD:5147398
RGD:1624291
G LOC100910245 ribose-phosphate pyrophosphokinase 2-like JBrowse link X 29,157,349 29,176,858 RGD:13792537
G LOC314140 ribose-phosphate pyrophosphokinase I -like JBrowse link 6 78,172,762 78,181,608 RGD:13792537
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1624291
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like JBrowse link 14 18,640,274 18,721,298 RGD:1600115
G Oas1a 2'-5' oligoadenylate synthetase 1A JBrowse link 12 41,200,680 41,211,393 RGD:1600115
RGD:1624291
G Prps1 phosphoribosyl pyrophosphate synthetase 1 JBrowse link X 111,798,233 111,820,270 RGD:1624291
RGD:13792537
G Prps1l1 phosphoribosyl pyrophosphate synthetase 1-like 1 JBrowse link 6 54,417,903 54,419,593 RGD:13792537
G Prps2 phosphoribosyl pyrophosphate synthetase 2 JBrowse link X 28,435,275 28,472,882 RGD:13792537
G Prpsap1 phosphoribosyl pyrophosphate synthetase-associated protein 1 JBrowse link 10 105,430,516 105,492,154 RGD:13792537
G Prpsap2 phosphoribosyl pyrophosphate synthetase-associated protein 2 JBrowse link 10 48,008,799 48,044,435 RGD:13792537
purine nucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt1 nudix hydrolase 1 JBrowse link 12 16,391,578 16,398,771 RGD:1624291
RGD:1600115
G Nudt15 nudix hydrolase 15 JBrowse link 15 55,417,774 55,456,698 RGD:1624291
purine nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07051450.1 RGD:13792537
G Adsl adenylosuccinate lyase JBrowse link 7 122,157,201 122,192,328 RGD:1598763
RGD:1598765
RGD:1598764
G Adssl1 adenylosuccinate synthase like 1 JBrowse link 6 137,184,818 137,206,694 RGD:1624291
G Ak1 adenylate kinase 1 JBrowse link 3 11,652,143 11,659,135 RGD:13792537
G Ak2 adenylate kinase 2 JBrowse link 5 147,185,474 147,204,050 RGD:13792537
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:13792537
G Ak4 adenylate kinase 4 JBrowse link 5 120,250,318 120,309,153 RGD:13792537
G Ak5 adenylate kinase 5 JBrowse link 2 257,671,772 257,864,385 RGD:13792537
G Ak7 adenylate kinase 7 JBrowse link 6 129,538,648 129,606,960 RGD:13792537
G Ak8 adenylate kinase 8 JBrowse link 3 7,279,429 7,394,509 RGD:13792537
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:13792537
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:13792537
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link 15 15,697,292 16,862,873 RGD:1624291
RGD:13792537
RGD:1600115
G Gmpr guanosine monophosphate reductase JBrowse link 17 19,543,274 19,580,929 RGD:1600115
G Guk1 guanylate kinase 1 JBrowse link 10 45,535,617 45,552,455 RGD:1624291
purine nucleotide salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:1624291
purine ribonucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07060778.1 RGD:13792537
G Hint1 histidine triad nucleotide binding protein 1 JBrowse link 10 40,208,236 40,211,981 RGD:1624291
RGD:13792537
RGD:1600115
G Hint1-ps1 histidine triad nucleotide binding protein 1, pseudogene 1 JBrowse link 4 93,405,665 93,406,239 RGD:13792537
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nt5c 5', 3'-nucleotidase, cytosolic JBrowse link 10 104,052,807 104,054,805 RGD:1624291
RGD:13792537
G Nt5m 5',3'-nucleotidase, mitochondrial JBrowse link 10 46,216,494 46,244,478 RGD:13792537
pyrimidine nucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:1600115
pyrimidine nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dck deoxycytidine kinase JBrowse link 14 20,935,442 20,952,939 RGD:1600115
RGD:1624291
G Dctd dCMP deaminase JBrowse link 16 47,177,144 47,222,850 RGD:1600115
G Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 JBrowse link 1 21,613,148 21,684,483 RGD:1600115
RGD:1624291
G Upp1 uridine phosphorylase 1 JBrowse link 14 89,314,234 89,334,060 RGD:1624291
pyrimidine ribonucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhodh dihydroorotate dehydrogenase (quinone) JBrowse link 19 42,066,103 42,087,906 RGD:13792537
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdk1 pyruvate dehydrogenase kinase 1 JBrowse link 3 58,530,870 58,561,494 RGD:1600115
RGD:1624291
G Pdk2 pyruvate dehydrogenase kinase 2 JBrowse link 10 82,838,270 82,852,758 RGD:1600115
RGD:1624291
G Pdk3 pyruvate dehydrogenase kinase 3 JBrowse link X 62,836,131 62,904,114 RGD:1624291
G Pdk4 pyruvate dehydrogenase kinase 4 JBrowse link 4 30,546,772 30,556,774 RGD:1600115
RGD:1624291
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
regulation of ATP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak4 adenylate kinase 4 JBrowse link 5 120,250,318 120,309,153 RGD:1624291
RGD:1600115
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif6 eukaryotic translation initiation factor 6 JBrowse link 3 151,356,867 151,363,201 RGD:1600115
RGD:1624291
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:1624291
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1624291
RGD:1600115
G Il3 interleukin 3 JBrowse link 10 39,620,535 39,622,973 RGD:1624291
G Jmjd8 jumonji domain containing 8 JBrowse link 10 15,195,954 15,198,870 RGD:1600115
RGD:1624291
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:634534
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase JBrowse link X 71,540,870 71,585,906 RGD:1600115
RGD:1624291
G Pfkfb3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 JBrowse link 17 70,632,778 70,713,736 RGD:729510
G Pgam1 phosphoglycerate mutase 1 JBrowse link 1 261,158,204 261,165,814 RGD:1624291
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 JBrowse link 4 6,559,153 6,799,888 RGD:1624291
G Slc2a6 solute carrier family 2 member 6 JBrowse link 3 5,567,729 5,575,144 RGD:1624291
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:1624291
G Zbtb7a zinc finger and BTB domain containing 7a JBrowse link 7 11,429,266 11,446,119 RGD:1600115
RGD:1624291
regulation of guanylate cyclase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Guca1a guanylate cyclase activator 1A JBrowse link 9 15,609,804 15,620,030 RGD:1624291
G Guca1b guanylate cyclase activator 1B JBrowse link 9 15,621,083 15,629,017 RGD:1624291
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase JBrowse link 2 84,678,892 84,694,152 RGD:1600115
RGD:1624291
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 JBrowse link 12 24,668,398 24,669,464 RGD:1624291
regulation of purine nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lacc1 laccase domain containing 1 JBrowse link 15 59,199,537 59,217,200 RGD:1624291
regulation of pyruvate kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jmjd8 jumonji domain containing 8 JBrowse link 10 15,195,954 15,198,870 RGD:1600115
RGD:1624291
ribonucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase JBrowse link 9 78,862,013 78,882,061 RGD:2301990
G Rnaseh2b ribonuclease H2, subunit B JBrowse link 15 45,422,010 45,472,792 RGD:1624291
RGD:13792537
succinyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot4 acyl-CoA thioesterase 4 JBrowse link 6 107,517,668 107,522,952 RGD:1624291
G Dlst dihydrolipoamide S-succinyltransferase JBrowse link 6 108,936,534 108,961,322 RGD:1600115
RGD:1624291
G Ogdh oxoglutarate dehydrogenase JBrowse link 14 86,414,924 86,481,903 RGD:2306877
RGD:1624291
G Sucla2 succinate-CoA ligase ADP-forming subunit beta JBrowse link 15 55,461,695 55,516,954 RGD:2306915
RGD:13792537
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha JBrowse link 4 101,181,315 101,210,692 RGD:2306879
RGD:2306915
G Suclg2 succinate-CoA ligase GDP-forming subunit beta JBrowse link 4 127,552,100 127,824,970 RGD:2306879
RGD:13792537
RGD:2306915
TDP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kynu kynureninase JBrowse link 3 28,416,926 28,566,939 RGD:2303721
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:2303721
RGD:13792537
UDP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmpk1 cytidine/uridine monophosphate kinase 1 JBrowse link 5 133,759,722 133,786,452 RGD:5133253
RGD:13792537
UDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 JBrowse link 15 51,222,954 51,250,787 RGD:1624291
UDP phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak9 adenylate kinase 9 JBrowse link 20 46,044,901 46,162,015 RGD:1624291
UMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Umps uridine monophosphate synthetase JBrowse link 11 70,034,181 70,044,590 RGD:5132277
RGD:13792537
RGD:1624291
G Uprt uracil phosphoribosyltransferase homolog JBrowse link X 75,382,553 75,408,541 RGD:5132591
UMP salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Uck1 uridine-cytidine kinase 1 JBrowse link 3 11,271,874 11,277,757 RGD:1600115
G Uck2 uridine-cytidine kinase 2 JBrowse link 13 85,376,716 85,443,976 RGD:1600115
G Uckl1 uridine-cytidine kinase 1-like 1 JBrowse link 3 177,066,022 177,078,611 RGD:1600115
G Upp1 uridine phosphorylase 1 JBrowse link 14 89,314,234 89,334,060 RGD:1600115
G Upp2 uridine phosphorylase 2 JBrowse link 3 44,806,106 44,846,464 RGD:1600115
UTP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase JBrowse link 6 26,657,507 26,680,459 RGD:2303528
RGD:13792537
G Decr2 2,4-dienoyl-CoA reductase 2 JBrowse link 10 15,451,850 15,460,227 RGD:1600115
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 10 81,657,152 81,666,542 RGD:1600115
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 10 81,648,216 81,653,717 RGD:729254
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 JBrowse link 10 14,258,232 14,259,365 RGD:1600115
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 JBrowse link 10 15,461,567 15,465,422 RGD:1600115
G Nme5 NME/NM23 family member 5 JBrowse link 18 27,357,460 27,374,641 RGD:1600115
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 JBrowse link 8 117,920,912 117,928,148 RGD:1600115
G Nme7 NME/NM23 family member 7 JBrowse link 13 82,607,844 82,737,383 RGD:1600115
UTP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak3 adenylate kinase 3 JBrowse link 1 247,144,486 247,169,690 RGD:1624291
RGD:1600115
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcd1 ATP binding cassette subfamily D member 1 JBrowse link X 157,073,860 157,095,652 RGD:1624291
RGD:1600115
very long-chain fatty-acyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 JBrowse link 18 44,810,462 44,897,677 RGD:1624291
RGD:1600115
XDP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nudt16 nudix hydrolase 16 JBrowse link 8 113,673,069 113,675,124 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      organic substance metabolic process 11495
        organophosphate metabolic process 955
          nucleoside phosphate metabolic process 503
            nucleotide metabolic process 496
              Mo(VI)-molybdopterin cytosine dinucleotide metabolic process + 0
              bis(5'-nucleosidyl) oligophosphate metabolic process + 0
              bis(molybdopterin guanine dinucleotide)molybdenum metabolic process + 0
              cyclic nucleotide metabolic process + 40
              deoxyribonucleotide metabolic process + 32
              diadenosine polyphosphate metabolic process + 8
              flavin adenine dinucleotide metabolic process + 2
              guanine deglycation + 1
              negative regulation of nucleotide metabolic process + 24
              nucleoside diphosphate phosphorylation + 143
              nucleotide biosynthetic process + 243
              nucleotide catabolic process + 52
              positive regulation of nucleotide metabolic process + 45
              purine nucleotide metabolic process + 421
              pyridine nucleotide metabolic process + 26
              pyrimidine nucleotide metabolic process + 35
              regulation of nucleotide metabolic process + 87
              ribonucleotide metabolic process + 403
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      nitrogen compound metabolic process 10193
        cellular nitrogen compound metabolic process 6542
          nucleobase-containing compound metabolic process 5344
            nucleobase-containing small molecule metabolic process 582
              nucleoside phosphate metabolic process 503
                nucleotide metabolic process 496
                  Mo(VI)-molybdopterin cytosine dinucleotide metabolic process + 0
                  bis(5'-nucleosidyl) oligophosphate metabolic process + 0
                  bis(molybdopterin guanine dinucleotide)molybdenum metabolic process + 0
                  cyclic nucleotide metabolic process + 40
                  deoxyribonucleotide metabolic process + 32
                  diadenosine polyphosphate metabolic process + 8
                  flavin adenine dinucleotide metabolic process + 2
                  guanine deglycation + 1
                  negative regulation of nucleotide metabolic process + 24
                  nucleoside diphosphate phosphorylation + 143
                  nucleotide biosynthetic process + 243
                  nucleotide catabolic process + 52
                  positive regulation of nucleotide metabolic process + 45
                  purine nucleotide metabolic process + 421
                  pyridine nucleotide metabolic process + 26
                  pyrimidine nucleotide metabolic process + 35
                  regulation of nucleotide metabolic process + 87
                  ribonucleotide metabolic process + 403
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.