Cplaq4_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Cplaq4_m (circadian period of locomotor activity 4 (mouse)) Mus musculus

Symbol: Cplaq4_m
Name: circadian period of locomotor activity 4 (mouse)
RGD ID: 1301011
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3919,673,442 - 43,673,601MOUSEQTLGRCm39
GRCm3819,634,361 - 43,634,520MOUSEQTLGRCm38
MGSCv3719,691,206 - 43,691,365 (+)MOUSEQTLGRCm37
MGSCv318,974,489 - 44,974,489RGD
cM Map110.96MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
PMID:8540893  



1 to 20 of 921 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
22930412610203C22RikRIKEN cDNA 2610203C22 gene196310579701317Mouse
1622215Vxnvexin196714929697367Mouse
329961958LOC131295123STARR-seq mESC enhancer starr_00166196954299696797Mouse
329963286LOC131295124STARR-seq mESC enhancer starr_00167197072139711417Mouse
39129288LOC110120427VISTA enhancer mm1546197184489721190Mouse
1315841Mybl1myeloblastosis oncogene-like 1197376329770664Mouse
329965142LOC131295125STARR-seq mESC enhancer starr_00168197717849773763Mouse
1552825Vcpip1valosin containing protein (p97)/p47 complex interacting protein 1197888479818607Mouse
401838307LOC132407743STARR-positive B cell enhancer ABC_E7714198150639815364Mouse
16113661700034P13RikRIKEN cDNA 1700034P13 gene198178739841481Mouse
329969438LOC131295126STARR-seq mESC enhancer starr_00169198321389833481Mouse
10019619Gm39590predicted gene, 39590198464619861544Mouse
15017336Gm51615predicted gene, 51615198520879852584Mouse
329964457LOC131295127STARR-seq mESC enhancer starr_00171198574489858808Mouse
401835496LOC132407744STARR-positive B cell enhancer ABC_E7715198677479868048Mouse
1550757Sgk3serum/glucocorticoid regulated kinase 3198683559972795Mouse
1617105Gm6195predicted pseudogene 6195198723339872778Mouse
329965239LOC131295128STARR-seq mESC enhancer starr_00172199591109960661Mouse
2303350Gm2352predicted gene 2352199721699972783Mouse
1622923Mcmdc2minichromosome maintenance domain containing 21997886310011179Mouse

1 to 20 of 921 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 48 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301011Cplaq4_mcircadian period of locomotor activity 4 (mouse)Not determined1967344243673601Mouse
1357524W6q14_mweight 6 weeks QTL 14 (mouse)Not determined13476013873976915Mouse
12910788Pwgrq9_mpost-weaning growth rate QTL 9 (mouse)14086800867270256Mouse
1301714Vertcling_mvertical clinging (mouse)Not determined14293803176938167Mouse
38501065Nociq4_mnociceptive sensitivity QTL 4 (mouse)11202506915142285Mouse
1301073Orch5_mautoimmune orchitis resistance 5 (mouse)Not determined11906535153065454Mouse
18182931Metl1_mmetabolite locus 1, pyridoxate (mouse)14127539975275399Mouse
1357651Lgq5_mlate growth QTL 5 (mouse)Not determined13476013873976915Mouse
12910786Pwgrq10_mpost-weaning growth rate QTL 10 (mouse)14086800867270256Mouse

1 to 10 of 48 rows


Database
Acc Id
Source(s)
MGD MGI:1277130

Note Type Note Reference