Gm24732 (predicted gene, 24732) - Rat Genome Database

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Gene: Gm24732 (predicted gene, 24732) Mus musculus
Analyze
Symbol: Gm24732
Name: predicted gene, 24732
RGD ID: 14996911
MGI Page MGI
Description:
Type: snrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39132,607,440 - 32,607,502 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl132,607,440 - 32,607,502 (-)EnsemblGRCm39 Ensembl
GRCm38132,568,359 - 32,568,421 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl132,568,359 - 32,568,421 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map1BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm24732
3 total Variants

Predicted Target Of
Summary Value
Count of predictions:106
Count of miRNA genes:103
Interacting mature miRNAs:103
Transcripts:ENSMUST00000158864
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 22 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301011Cplaq4_mcircadian period of locomotor activity 4 (mouse)Not determined1967344243673601Mouse
1301073Orch5_mautoimmune orchitis resistance 5 (mouse)Not determined11906535153065454Mouse
1301275Sle10_msystematic lupus erythematosus susceptibility 10 (mouse)Not determined1288219436882352Mouse
15092046Wngrme1_mweek nine growth rate, maternal effect 1 (mouse)1328014237782236Mouse
11100001Col4a1m1_mcollagen, type IV, alpha 1 modifier 1 (mouse)12555019162946882Mouse
1301370Adip1_madiposity 1 (mouse)Not determined1288219436882352Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
15092044Wtgrme1_mweek ten growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301240Sluc15_msusceptibility to lung cancer 15 (mouse)Not determined11906535153065454Mouse

1 to 10 of 22 rows





RefSeq Transcripts XR_004936748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000158864
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl132,607,440 - 32,607,502 (-)Ensembl
GRCm38.p6 Ensembl132,568,359 - 32,568,421 (-)Ensembl
RefSeq Acc Id: XR_004936748
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39132,607,440 - 32,607,502 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000089489 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000158864 ENTREZGENE
MGD MGI:5454509 ENTREZGENE
NCBI Gene Gm24732 ENTREZGENE
PhenoGen Gm24732 PhenoGen
RNAcentral URS000063AF9D RNACentral