Gm28154 (predicted gene 28154) - Rat Genome Database

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Gene: Gm28154 (predicted gene 28154) Mus musculus
Analyze
Symbol: Gm28154
Name: predicted gene 28154
RGD ID: 9598947
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39117,685,307 - 17,711,606 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl117,685,308 - 17,711,305 (-)EnsemblGRCm39 Ensembl
GRCm38117,615,083 - 17,641,382 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl117,615,084 - 17,641,081 (-)EnsemblGRCm38mm10GRCm38
Celera117,526,806 - 17,552,841 (-)NCBICelera
Cytogenetic Map1A3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in Gm28154
786 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412226Alpq4_malcohol preference QTL 4 (mouse)Not determined1122976684Mouse
1301891Alcp25_malcohol preference locus 25 (mouse)Not determined1125203185Mouse
1300834Cia20_mcollagen induced arthritis 20 (mouse)Not determined1125203185Mouse
1301482Morph1_mmorphine antinociception 1 (mouse)Not determined1130367747Mouse
1301275Sle10_msystematic lupus erythematosus susceptibility 10 (mouse)Not determined1288219436882352Mouse
1301370Adip1_madiposity 1 (mouse)Not determined1288219436882352Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
15092044Wtgrme1_mweek ten growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092046Wngrme1_mweek nine growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092048Wsigrme1_mweek six growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092050Wsegrme1_mweek seven growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092051Wegrme1_mweek eight growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092055Lgrme1_mlate growth rate, maternal effect 1 (mouse)1328014237782236Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301471Obq2_mobesity QTL 2 (mouse)Not determined1394162037941887Mouse
10043970Obq23_mobesity QTL 23 (mouse)Not determined1501266539012665Mouse
1301011Cplaq4_mcircadian period of locomotor activity 4 (mouse)Not determined1967344243673601Mouse
14700685Civq2_mcerebral infarct volume QTL 2 (mouse)11134048245340482Mouse
4141646Fecq3_mfecundity QTL 3 (mouse)Not determined11291692026517685Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000186267
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl117,685,308 - 17,711,305 (-)Ensembl
GRCm38.p6 Ensembl117,615,084 - 17,641,081 (-)Ensembl
RefSeq Acc Id: XR_004935549
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,691,844 - 17,711,322 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004935550
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,705,982 - 17,711,322 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004935551
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,691,844 - 17,711,322 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004935552
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,685,307 - 17,711,322 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004935553
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,705,982 - 17,711,322 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004935554
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,691,844 - 17,711,322 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004935555
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,691,844 - 17,711,322 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004935556
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,691,844 - 17,711,322 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004935559
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,705,982 - 17,711,606 (-)NCBI
Sequence:
RefSeq Acc Id: XR_373227
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,691,844 - 17,711,322 (-)NCBI
GRCm38117,621,620 - 17,641,098 (-)NCBI
Sequence:
RefSeq Acc Id: XR_865211
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39117,705,982 - 17,711,322 (-)NCBI
GRCm38117,635,758 - 17,641,098 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000100053 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000186267 ENTREZGENE
MGD MGI:5578860 ENTREZGENE
NCBI Gene Gm28154 ENTREZGENE
PhenoGen Gm28154 PhenoGen