Gm23722 (predicted gene, 23722) - Rat Genome Database

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Gene: Gm23722 (predicted gene, 23722) Mus musculus
Analyze
Symbol: Gm23722
Name: predicted gene, 23722
RGD ID: 15554249
MGI Page MGI
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: LOC115485772; small nucleolar RNA SNORA33
Latest Assembly: GRCm39 Ensembl - Mouse Genome Assembly GRCm39 Ensembl
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39139,612,827 - 39,612,956 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl139,612,827 - 39,612,956 (-)EnsemblGRCm39 Ensembl
GRCm38139,573,746 - 39,573,875 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl139,573,746 - 39,573,875 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map1BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm23722
5 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:74
Count of miRNA genes:68
Interacting mature miRNAs:72
Transcripts:ENSMUST00000083002
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_004936775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000083002
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl139,612,827 - 39,612,956 (-)Ensembl
GRCm38.p6 Ensembl139,573,746 - 39,573,875 (-)Ensembl
RefSeq Acc Id: XR_004936775
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39139,612,827 - 39,612,956 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000064936 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083002 ENTREZGENE
MGD MGI:5453499 ENTREZGENE
NCBI Gene LOC115485772 ENTREZGENE
PhenoGen Gm23722 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-07-02 Gm23722  predicted gene, 23722  LOC115485772  small nucleolar RNA SNORA33  Symbol and/or name change 19259462 PROVISIONAL
2020-06-30 LOC115485772  small nucleolar RNA SNORA33  Gm23722  predicted gene, 23722  Symbol and/or name change 5135510 APPROVED
2020-06-25 Gm23722  predicted gene, 23722  LOC115485772  small nucleolar RNA SNORA33  Symbol and/or name change 19259462 PROVISIONAL
2020-06-19 LOC115485772  small nucleolar RNA SNORA33  Gm23722  predicted gene, 23722  Symbol and/or name change 5135510 APPROVED