Fam135a (family with sequence similarity 135, member A) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Fam135a (family with sequence similarity 135, member A) Mus musculus
Analyze
Symbol: Fam135a
Name: family with sequence similarity 135, member A
RGD ID: 1312651
MGI Page MGI
Description: Predicted to be involved in cellular lipid metabolic process. Is expressed in neural retinal epithelium; peripheral nervous system; retina layer; retina nuclear layer; and retina outer nuclear layer. Orthologous to human FAM135A (family with sequence similarity 135 member A).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4921533L14Rik; AI256732; AI835491; expressed sequence AI256732; hypothetical protein LOC68187; KIAA1411
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39124,049,824 - 24,139,444 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl124,050,174 - 24,139,422 (-)EnsemblGRCm39 Ensembl
GRCm38124,010,758 - 24,100,484 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl124,011,093 - 24,100,341 (-)EnsemblGRCm38mm10GRCm38
MGSCv37124,017,597 - 24,107,180 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36123,965,956 - 24,040,849 (-)NCBIMGSCv36mm8
Celera123,846,980 - 23,937,932 (-)NCBICelera
Cytogenetic Map1A5NCBI
cM Map19.87NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12520002   PMID:15226823   PMID:15368895   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:21267068   PMID:21873635   PMID:38355793  


Genomics

Comparative Map Data
Fam135a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39124,049,824 - 24,139,444 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl124,050,174 - 24,139,422 (-)EnsemblGRCm39 Ensembl
GRCm38124,010,758 - 24,100,484 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl124,011,093 - 24,100,341 (-)EnsemblGRCm38mm10GRCm38
MGSCv37124,017,597 - 24,107,180 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36123,965,956 - 24,040,849 (-)NCBIMGSCv36mm8
Celera123,846,980 - 23,937,932 (-)NCBICelera
Cytogenetic Map1A5NCBI
cM Map19.87NCBI
FAM135A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38670,413,508 - 70,561,174 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl670,412,941 - 70,561,174 (+)EnsemblGRCh38hg38GRCh38
GRCh37671,123,211 - 71,270,877 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36671,179,828 - 71,327,596 (+)NCBINCBI36Build 36hg18NCBI36
Build 34671,179,989 - 71,327,448NCBI
Celera671,511,530 - 71,659,293 (+)NCBICelera
Cytogenetic Map6q13NCBI
HuRef668,321,422 - 68,469,035 (+)NCBIHuRef
CHM1_1671,289,438 - 71,437,228 (+)NCBICHM1_1
T2T-CHM13v2.0671,594,068 - 71,741,718 (+)NCBIT2T-CHM13v2.0
Fam135a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8933,916,449 - 33,997,140 (-)NCBIGRCr8
mRatBN7.2926,420,116 - 26,500,803 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl926,420,528 - 26,500,717 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx934,929,897 - 35,010,501 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0940,048,187 - 40,129,008 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0938,357,942 - 38,438,542 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0930,255,057 - 30,335,775 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl930,255,459 - 30,321,323 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0929,080,102 - 29,160,296 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4922,725,545 - 22,803,942 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1922,726,956 - 22,793,720 (-)NCBI
Celera923,957,983 - 24,035,906 (-)NCBICelera
Cytogenetic Map9q13NCBI
Fam135a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554885,529,505 - 5,617,396 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554885,529,579 - 5,616,188 (+)NCBIChiLan1.0ChiLan1.0
FAM135A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2590,401,510 - 90,549,142 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1688,326,711 - 88,474,504 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0668,248,800 - 68,396,398 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1671,546,924 - 71,694,411 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl671,546,924 - 71,694,408 (+)Ensemblpanpan1.1panPan2
FAM135A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11232,930,938 - 33,063,187 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1232,930,982 - 33,062,000 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1232,789,377 - 32,922,123 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01233,469,942 - 33,602,889 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1233,469,795 - 33,603,038 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11233,000,862 - 33,133,354 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01233,042,117 - 33,175,110 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01233,155,210 - 33,287,745 (+)NCBIUU_Cfam_GSD_1.0
Fam135a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494668,183,608 - 68,287,863 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366182,340,814 - 2,445,225 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366182,340,851 - 2,445,219 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAM135A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl150,579,715 - 50,716,357 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1150,579,709 - 50,716,185 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2156,854,925 - 56,989,555 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FAM135A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1174,438,643 - 4,570,653 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl174,438,599 - 4,554,706 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605810,443,194 - 10,581,826 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fam135a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248199,340,893 - 9,426,022 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248199,339,885 - 9,441,462 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:391
Count of miRNA genes:297
Interacting mature miRNAs:338
Transcripts:ENSMUST00000027337
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301011Cplaq4_mcircadian period of locomotor activity 4 (mouse)Not determined1967344243673601Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301073Orch5_mautoimmune orchitis resistance 5 (mouse)Not determined11906535153065454Mouse
1301275Sle10_msystematic lupus erythematosus susceptibility 10 (mouse)Not determined1288219436882352Mouse
15092046Wngrme1_mweek nine growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301370Adip1_madiposity 1 (mouse)Not determined1288219436882352Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
15092044Wtgrme1_mweek ten growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301240Sluc15_msusceptibility to lung cancer 15 (mouse)Not determined11906535153065454Mouse
1301471Obq2_mobesity QTL 2 (mouse)Not determined1394162037941887Mouse
14700685Civq2_mcerebral infarct volume QTL 2 (mouse)11134048245340482Mouse
1301756Pgia1_mproteoglycan induced arthritis 1 (mouse)Not determined11906535153065454Mouse
1301891Alcp25_malcohol preference locus 25 (mouse)Not determined1125203185Mouse
1300834Cia20_mcollagen induced arthritis 20 (mouse)Not determined1125203185Mouse
4141646Fecq3_mfecundity QTL 3 (mouse)Not determined11291692026517685Mouse
15092055Lgrme1_mlate growth rate, maternal effect 1 (mouse)1328014237782236Mouse
12880407V125Dq2_mvitamin D active form serum level QTL 2 (mouse)11933908153339081Mouse
15092050Wsegrme1_mweek seven growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092051Wegrme1_mweek eight growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092048Wsigrme1_mweek six growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1357475w3q13_mweight 3 weeks QTL 13 (mouse)Not determined12310959173976915Mouse
1301482Morph1_mmorphine antinociception 1 (mouse)Not determined1130367747Mouse
10043970Obq23_mobesity QTL 23 (mouse)Not determined1501266539012665Mouse

Markers in Region
38.MMHAP23FLE5.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38124,044,660 - 24,044,818UniSTSGRCm38
MGSCv37124,051,499 - 24,051,657UniSTSGRCm37
Celera123,882,793 - 23,882,951UniSTS
Cytogenetic Map1A5UniSTS
Whitehead_YAC1 UniSTS
D1Mit169.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38124,064,924 - 24,065,033UniSTSGRCm38
MGSCv37124,071,763 - 24,071,872UniSTSGRCm37
Celera123,903,046 - 23,903,155UniSTS
Cytogenetic Map1A5UniSTS
cM Map115.0UniSTS
cM Map1 UniSTS
Whitehead Genetic112.5521UniSTS
Whitehead_YAC1 UniSTS
D1Mit169  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38124,064,967 - 24,065,107UniSTSGRCm38
MGSCv37124,071,806 - 24,071,946UniSTSGRCm37
Celera123,903,089 - 23,903,231UniSTS
Cytogenetic Map1A5UniSTS
cM Map115.0UniSTS
Whitehead Genetic112.0UniSTS
UniSTS:234085  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38124,093,547 - 24,093,789UniSTSGRCm38
MGSCv37124,100,386 - 24,100,628UniSTSGRCm37
Celera123,931,151 - 23,931,393UniSTS
Cytogenetic Map1A5UniSTS
AI835491  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38124,011,156 - 24,011,237UniSTSGRCm38
MGSCv37124,017,995 - 24,018,076UniSTSGRCm37
Celera123,847,379 - 23,847,460UniSTS
Cytogenetic Map1A5UniSTS
Whitehead/MRC_RH1439.6UniSTS
AI555249  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38124,011,350 - 24,011,553UniSTSGRCm38
MGSCv37124,018,189 - 24,018,392UniSTSGRCm37
Celera123,847,573 - 23,847,776UniSTS
Cytogenetic Map1A5UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001403087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001403097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_175350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011238569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017322275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC123790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC129325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK081262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC066812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC083093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM200880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY732479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000027337   ⟹   ENSMUSP00000027337
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,050,762 - 24,139,414 (-)Ensembl
GRCm38.p6 Ensembl124,011,681 - 24,100,333 (-)Ensembl
Ensembl Acc Id: ENSMUST00000185525
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,090,845 - 24,139,422 (-)Ensembl
GRCm38.p6 Ensembl124,051,764 - 24,100,341 (-)Ensembl
Ensembl Acc Id: ENSMUST00000185807   ⟹   ENSMUSP00000140078
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,063,356 - 24,067,531 (-)Ensembl
GRCm38.p6 Ensembl124,024,275 - 24,028,450 (-)Ensembl
Ensembl Acc Id: ENSMUST00000186331   ⟹   ENSMUSP00000140947
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,050,685 - 24,068,167 (-)Ensembl
GRCm38.p6 Ensembl124,011,604 - 24,029,086 (-)Ensembl
Ensembl Acc Id: ENSMUST00000186999   ⟹   ENSMUSP00000140198
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,067,803 - 24,139,297 (-)Ensembl
GRCm38.p6 Ensembl124,028,722 - 24,100,216 (-)Ensembl
Ensembl Acc Id: ENSMUST00000187369   ⟹   ENSMUSP00000140766
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,050,672 - 24,139,263 (-)Ensembl
GRCm38.p6 Ensembl124,011,591 - 24,100,182 (-)Ensembl
Ensembl Acc Id: ENSMUST00000187619   ⟹   ENSMUSP00000139993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,050,174 - 24,065,840 (-)Ensembl
GRCm38.p6 Ensembl124,011,093 - 24,026,759 (-)Ensembl
Ensembl Acc Id: ENSMUST00000187752   ⟹   ENSMUSP00000139633
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,050,326 - 24,139,275 (-)Ensembl
GRCm38.p6 Ensembl124,011,245 - 24,100,194 (-)Ensembl
Ensembl Acc Id: ENSMUST00000188712   ⟹   ENSMUSP00000139754
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl124,050,174 - 24,125,607 (-)Ensembl
GRCm38.p6 Ensembl124,011,093 - 24,086,526 (-)Ensembl
RefSeq Acc Id: NM_001403087   ⟹   NP_001390016
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403088   ⟹   NP_001390017
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403089   ⟹   NP_001390018
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403090   ⟹   NP_001390019
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403091   ⟹   NP_001390020
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403092   ⟹   NP_001390021
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403093   ⟹   NP_001390022
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403094   ⟹   NP_001390023
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403095   ⟹   NP_001390024
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403096   ⟹   NP_001390025
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_001403097   ⟹   NP_001390026
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: NM_026604   ⟹   NP_080880
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,839 - 24,139,422 (-)NCBI
GRCm38124,010,758 - 24,100,341 (-)NCBI
MGSCv37124,017,597 - 24,107,180 (-)RGD
Celera123,846,980 - 23,937,932 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_175350
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,049,824 - 24,139,340 (-)NCBI
RefSeq Acc Id: XM_006496232   ⟹   XP_006496295
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,139,441 (-)NCBI
GRCm38124,011,090 - 24,100,362 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011238569   ⟹   XP_011236871
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,139,444 (-)NCBI
GRCm38124,011,090 - 24,100,360 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017322275   ⟹   XP_017177764
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,139,440 (-)NCBI
GRCm38124,011,090 - 24,100,361 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242596   ⟹   XP_030098456
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,139,421 (-)NCBI
GRCm38124,011,090 - 24,100,354 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242597   ⟹   XP_030098457
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,093,116 (-)NCBI
GRCm38124,011,090 - 24,054,035 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242598   ⟹   XP_030098458
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,139,444 (-)NCBI
GRCm38124,011,090 - 24,100,361 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242599   ⟹   XP_030098459
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,139,431 (-)NCBI
GRCm38124,011,090 - 24,100,361 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242600   ⟹   XP_030098460
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,139,410 (-)NCBI
GRCm38124,011,090 - 24,100,222 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153271   ⟹   XP_036009164
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,171 - 24,139,422 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004934154
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39124,050,685 - 24,139,444 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001390016 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390017 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390018 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390019 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390020 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390021 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390022 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390023 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390024 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390025 (Get FASTA)   NCBI Sequence Viewer  
  NP_001390026 (Get FASTA)   NCBI Sequence Viewer  
  NP_080880 (Get FASTA)   NCBI Sequence Viewer  
  XP_006496295 (Get FASTA)   NCBI Sequence Viewer  
  XP_011236871 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177764 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098456 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098457 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098458 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098459 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098460 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009164 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH31160 (Get FASTA)   NCBI Sequence Viewer  
  AAH70446 (Get FASTA)   NCBI Sequence Viewer  
  AAH83093 (Get FASTA)   NCBI Sequence Viewer  
  BAB31792 (Get FASTA)   NCBI Sequence Viewer  
  BAC28616 (Get FASTA)   NCBI Sequence Viewer  
  BAC31883 (Get FASTA)   NCBI Sequence Viewer  
  BAD32444 (Get FASTA)   NCBI Sequence Viewer  
  BAE25234 (Get FASTA)   NCBI Sequence Viewer  
  BAE28800 (Get FASTA)   NCBI Sequence Viewer  
  EDL14408 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000027337
  ENSMUSP00000027337.9
  ENSMUSP00000139633
  ENSMUSP00000139633.2
  ENSMUSP00000139754.2
  ENSMUSP00000139993.2
  ENSMUSP00000140078.2
  ENSMUSP00000140198.2
  ENSMUSP00000140766
  ENSMUSP00000140766.2
  ENSMUSP00000140947.2
GenBank Protein Q6NS59 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_080880   ⟸   NM_026604
- Peptide Label: isoform 3
- UniProtKB: Q8K2K2 (UniProtKB/Swiss-Prot),   Q8BZL9 (UniProtKB/Swiss-Prot),   Q8BXS8 (UniProtKB/Swiss-Prot),   Q5XK31 (UniProtKB/Swiss-Prot),   Q3UEW1 (UniProtKB/Swiss-Prot),   Q9D2J6 (UniProtKB/Swiss-Prot),   Q6NS59 (UniProtKB/Swiss-Prot),   A0A087WP54 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496295   ⟸   XM_006496232
- Peptide Label: isoform X2
- UniProtKB: A0A087WP54 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011236871   ⟸   XM_011238569
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_017177764   ⟸   XM_017322275
- Peptide Label: isoform X6
- UniProtKB: A0A087WP54 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030098459   ⟸   XM_030242599
- Peptide Label: isoform X12
RefSeq Acc Id: XP_030098458   ⟸   XM_030242598
- Peptide Label: isoform X11
RefSeq Acc Id: XP_030098456   ⟸   XM_030242596
- Peptide Label: isoform X10
RefSeq Acc Id: XP_030098460   ⟸   XM_030242600
- Peptide Label: isoform X12
RefSeq Acc Id: XP_030098457   ⟸   XM_030242597
- Peptide Label: isoform X10
Ensembl Acc Id: ENSMUSP00000027337   ⟸   ENSMUST00000027337
Ensembl Acc Id: ENSMUSP00000140947   ⟸   ENSMUST00000186331
Ensembl Acc Id: ENSMUSP00000140198   ⟸   ENSMUST00000186999
Ensembl Acc Id: ENSMUSP00000140078   ⟸   ENSMUST00000185807
Ensembl Acc Id: ENSMUSP00000139754   ⟸   ENSMUST00000188712
Ensembl Acc Id: ENSMUSP00000139993   ⟸   ENSMUST00000187619
Ensembl Acc Id: ENSMUSP00000139633   ⟸   ENSMUST00000187752
Ensembl Acc Id: ENSMUSP00000140766   ⟸   ENSMUST00000187369
RefSeq Acc Id: XP_036009164   ⟸   XM_036153271
- Peptide Label: isoform X10
RefSeq Acc Id: NP_001390020   ⟸   NM_001403091
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001390016   ⟸   NM_001403087
- Peptide Label: isoform 1
RefSeq Acc Id: NP_001390026   ⟸   NM_001403097
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001390025   ⟸   NM_001403096
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001390023   ⟸   NM_001403094
- Peptide Label: isoform 6
- UniProtKB: A0A087WRT5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390021   ⟸   NM_001403092
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001390017   ⟸   NM_001403088
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001390024   ⟸   NM_001403095
- Peptide Label: isoform 6
- UniProtKB: A0A087WRT5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001390019   ⟸   NM_001403090
- Peptide Label: isoform 3
- UniProtKB: Q8BZL9 (UniProtKB/Swiss-Prot),   Q8BXS8 (UniProtKB/Swiss-Prot),   Q6NS59 (UniProtKB/Swiss-Prot),   Q5XK31 (UniProtKB/Swiss-Prot),   Q3UEW1 (UniProtKB/Swiss-Prot),   Q8K2K2 (UniProtKB/Swiss-Prot),   Q9D2J6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001390022   ⟸   NM_001403093
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001390018   ⟸   NM_001403089
- Peptide Label: isoform 2
Protein Domains
DUF676

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6NS59-F1-model_v2 AlphaFold Q6NS59 1-1506 view protein structure

Promoters
RGD ID:6817095
Promoter ID:MM_KWN:278
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:UC007AMK.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36124,035,721 - 24,036,221 (-)MPROMDB
RGD ID:6873320
Promoter ID:EPDNEW_M111
Type:initiation region
Name:Fam135a_1
Description:Mus musculus family with sequence similarity 135, member A ,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38124,100,253 - 24,100,313EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915437 AgrOrtholog
Ensembl Genes ENSMUSG00000026153 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027337 ENTREZGENE
  ENSMUST00000027337.15 UniProtKB/Swiss-Prot
  ENSMUST00000185807.2 UniProtKB/TrEMBL
  ENSMUST00000186331.2 UniProtKB/TrEMBL
  ENSMUST00000186999.7 UniProtKB/TrEMBL
  ENSMUST00000187369 ENTREZGENE
  ENSMUST00000187369.7 UniProtKB/TrEMBL
  ENSMUST00000187619.7 UniProtKB/TrEMBL
  ENSMUST00000187752 ENTREZGENE
  ENSMUST00000187752.7 UniProtKB/TrEMBL
  ENSMUST00000188712.7 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF3657 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF676_lipase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:68187 UniProtKB/Swiss-Prot
MGD MGI:1915437 ENTREZGENE
NCBI Gene 68187 ENTREZGENE
PANTHER PROTEIN FAM135A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12482 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF3657 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF676 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fam135a PhenoGen
Superfamily-SCOP SSF53474 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WP54 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WPF3_MOUSE UniProtKB/TrEMBL
  A0A087WQ08_MOUSE UniProtKB/TrEMBL
  A0A087WQ81_MOUSE UniProtKB/TrEMBL
  A0A087WQH5_MOUSE UniProtKB/TrEMBL
  A0A087WRT5 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WS93_MOUSE UniProtKB/TrEMBL
  F135A_MOUSE UniProtKB/Swiss-Prot
  Q3UEW1 ENTREZGENE
  Q3UQ10_MOUSE UniProtKB/TrEMBL
  Q5XK31 ENTREZGENE
  Q6NS59 ENTREZGENE
  Q8BXS8 ENTREZGENE
  Q8BZL9 ENTREZGENE
  Q8K2K2 ENTREZGENE
  Q9D2J6 ENTREZGENE
UniProt Secondary Q3UEW1 UniProtKB/Swiss-Prot
  Q5XK31 UniProtKB/Swiss-Prot
  Q8BXS8 UniProtKB/Swiss-Prot
  Q8BZL9 UniProtKB/Swiss-Prot
  Q8K2K2 UniProtKB/Swiss-Prot
  Q9D2J6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-05 Fam135a  family with sequence similarity 135, member A  AI256732  expressed sequence AI256732  Data merged from RGD:1610079 737654 PROVISIONAL