Gm39628 (predicted gene, 39628) - Rat Genome Database

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Gene: Gm39628 (predicted gene, 39628) Mus musculus
Analyze
Symbol: Gm39628
Name: predicted gene, 39628
RGD ID: 10037157
MGI Page MGI
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39137,723,623 - 37,734,653 (+)NCBIGRCm39GRCm39mm39
GRCm38137,684,542 - 37,695,572 (+)NCBIGRCm38GRCm38mm10GRCm38
Celera137,468,312 - 37,481,800 (+)NCBICelera
Cytogenetic Map1BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm39628
620 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1301011Cplaq4_mcircadian period of locomotor activity 4 (mouse)Not determined1967344243673601Mouse
1357524W6q14_mweight 6 weeks QTL 14 (mouse)Not determined13476013873976915Mouse
1301073Orch5_mautoimmune orchitis resistance 5 (mouse)Not determined11906535153065454Mouse
1357651Lgq5_mlate growth QTL 5 (mouse)Not determined13476013873976915Mouse
11100001Col4a1m1_mcollagen, type IV, alpha 1 modifier 1 (mouse)12555019162946882Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
1301471Obq2_mobesity QTL 2 (mouse)Not determined1394162037941887Mouse
12880407V125Dq2_mvitamin D active form serum level QTL 2 (mouse)11933908153339081Mouse
1357824Estoq4_membryo survival total QTL 4 (mouse)Not determined13476013873976915Mouse
1357506W10q6_mweight 10 weeks QTL 6 (mouse)Not determined13476013873976915Mouse
39128207Lwq16_mliver weight QTL 16 (mouse)13476013873976915Mouse
10043970Obq23_mobesity QTL 23 (mouse)Not determined1501266539012665Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
12880409V125Dq1_mvitamin D active form serum level QTL 1 (mouse)12603916060039160Mouse
4142433Hbnr1_mHeligmosomoides bakeri nematode resistance 1 (mouse)Not determined2555019158273271Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
15092046Wngrme1_mweek nine growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092044Wtgrme1_mweek ten growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1301240Sluc15_msusceptibility to lung cancer 15 (mouse)Not determined11906535153065454Mouse
1357759W3q12_mweight 3 weeks QTL 12 (mouse)Not determined13476013873976915Mouse
14700685Civq2_mcerebral infarct volume QTL 2 (mouse)11134048245340482Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1301756Pgia1_mproteoglycan induced arthritis 1 (mouse)Not determined11906535153065454Mouse
15092055Lgrme1_mlate growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092050Wsegrme1_mweek seven growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092051Wegrme1_mweek eight growth rate, maternal effect 1 (mouse)1328014237782236Mouse
15092048Wsigrme1_mweek six growth rate, maternal effect 1 (mouse)1328014237782236Mouse
1357475w3q13_mweight 3 weeks QTL 13 (mouse)Not determined12310959173976915Mouse


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_003947780
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39137,723,623 - 37,734,653 (+)NCBI
GRCm38137,684,542 - 37,695,572 (+)NCBI
Sequence:
RefSeq Acc Id: XR_865356
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39137,723,623 - 37,734,653 (+)NCBI
GRCm38137,684,542 - 37,695,572 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
MGD MGI:5622513 ENTREZGENE
NCBI Gene Gm39628 ENTREZGENE
PhenoGen Gm39628 PhenoGen