Bp161 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp161 (Blood pressure QTL 161) Rattus norvegicus

Symbol: Bp161
Name: Blood pressure QTL 161
RGD ID: 737974
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: mean arterial blood pressure   (CMO:0000009)    
LOD Score: Not Available
P Value: 0.002
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81129,182,274 - 174,182,274RGD_MAPPER_PIPELINE
mRatBN7.21164,747,558 - 181,133,855RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01175,447,162 - 197,963,658RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01182,435,183 - 204,942,418RGDRnor5.0
RGSC_v3.41168,382,329 - 185,690,881RGDRGSC3.4
RGSC_v3.11168,492,992 - 185,840,762RGD
Cross Type: Not Available
Strains Crossed: SHR.WKY-(D1Wox19-D1Wox34)/Njs 
JBrowse: View Region in Genome Browser (JBrowse)
Model




  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp161Rathypertension  IAGP 61051 RGD 

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp161Ratincreased systemic arterial blood pressure  IAGP 61051 RGD 

Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp161Ratmean arterial blood pressure  IDA 61051 RGD 

Experimental Condition
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp161Ratcontrol condition  IDA 61051 RGD 

Measurement Method
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp161Ratvascular indwelling catheter method  IDA 61051 RGD 

Rat Strain
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp161RatSHR.WKY-(D1Wox19-D1Wox34)/Njs  IEA 61051 RGD 

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bp161Ratarterial blood pressure trait  IDA 61051 RGD 


#
Reference Title
Reference Citation
1. Successful isolation of a rat chromosome 1 blood pressure quantitative trait locus in reciprocal congenic strains Frantz SA, etal., Hypertension 1998 Oct;32(4):639-46

Related QTL Description Reference
Bp29 interacts with RGD:61051
Bp160 maps to same region RGD:61051



1 to 20 of 219 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2047Admadrenomedullin1164745484164747655Rat
1588628Kpna1-ps9karyopherin subunit alpha 1, pseudogene 91164788138164789691Rat
11423621LOC108349612uncharacterized LOC1083496121164828353164859432Rat
9142791LOC103691204uncharacterized LOC1036912041164862825164886508Rat
2111Ampd3adenosine monophosphate deaminase 31164884823164929899Rat
1303154Rnf141ring finger protein 1411164933972164957081Rat
1310864Lyve1lymphatic vessel endothelial hyaluronan receptor 11164962872164976309Rat
1309828Irag1inositol 1,4,5-triphosphate receptor associated 11164981716165094232Rat
1311097Ctr9CTR9 homolog, Paf1/RNA polymerase II complex component1165137277165167303Rat
1305294Eif4g2eukaryotic translation initiation factor 4, gamma 21165181433165193583Rat
41129599Snord97small nucleolar RNA, C/D box 971165186791165186978Rat
9241707Zbed5l-ps1zinc finger BED-type containing 5 like, pseudogene 11165234060165240783Rat
6489976LOC100911864uncharacterized LOC1009118641165274998165281034Rat
1566189Ftl1l7ferritin light chain 1 like 71165377580165378490Rat
11502966Trnas-gcu1transfer RNA serine (anticodon GCU) 11165571303165571384Rat
11374957LOC108349779keratin-associated protein 10-6-like1165574345165575331Rat
1309623Galnt18polypeptide N-acetylgalactosaminyltransferase 181165593180165904268Rat
40966768LOC120099905uncharacterized LOC1200999051165614823165635270Rat
41014533LOC120100128U6 spliceosomal RNA1165942462165942568Rat
1310411Usp47ubiquitin specific peptidase 471166152104166235312Rat

1 to 20 of 219 rows
1 to 20 of 377 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match
10165D1Wox341341164747424164747558Ratregion
5064524BI3022501651164772461164772626Ratregion
60206D1Got1571011164797411164797512Ratregion
5503831MARC_45777-45778:1101741591:5631164920109164920658Ratregion
5503825MARC_44785-45781:1101739916:11771164922360164923531Ratregion
5052637RH1421771971164928760164928957Ratregion
5057167D1Bda345271164929146164929673Ratregion
5077244RH1396452021164929564164929766Ratregion
5042640RH1295561941164931150164931344Ratregion
5049636RH1335942181164933069164933287Ratregion
5081879BE1186221521164963828164963980Ratregion
5079162RH1407711721164981813164981985Ratregion
5088647AU0486931661165015145165015311Ratregion
60205D1Got1562061165126860165127066Ratregion
5502731CTR93501165159605165159955Ratregion
5085567AI2313691861165166559165166745Ratregion
5040868RH1285301881165166899165167087Ratregion
5025838RH1298831821165181433165181615Ratregion
5041922RH1291361951165181489165181684Ratregion
5028947RH1429272451165183381165183626Ratregion
1 to 20 of 377 rows

Flank 1: (D1Wox19)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21181,133,855 - 181,134,010 (+)MAPPER
Rnor_6.01197,963,658 - 197,963,812NCBI
Rnor_5.01204,942,418 - 204,942,572UniSTS
RGSC_v3.41185,690,881 - 185,691,036RGD
RGSC_v3.41185,690,882 - 185,691,036UniSTS
RGSC_v3.11185,840,762 - 185,840,917RGD
Celera1178,791,870 - 178,792,040UniSTS
RH 2.0 Map1960.6RGD
Cytogenetic Map1q36UniSTS
Flank 2: (D1Wox34)
Rat AssemblyChrPosition (strand)Source
GRCr81174,182,140 - 174,182,274 (+)Marker Load Pipeline
mRatBN7.21164,747,424 - 164,747,558 (+)MAPPER
Rnor_6.01175,447,029 - 175,447,162NCBI
Rnor_5.01182,435,050 - 182,435,183UniSTS
RGSC_v3.41168,382,195 - 168,382,329RGD
RGSC_v3.41168,382,196 - 168,382,329UniSTS
RGSC_v3.11168,492,858 - 168,492,992RGD
Celera1162,639,018 - 162,639,151UniSTS
RH 3.4 Map11338.3RGD
RH 3.4 Map11338.3UniSTS
RH 2.0 Map1910.1RGD
Cytogenetic Map1q33UniSTS


1 to 10 of 109 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
1302787Stl25Serum triglyceride level QTL 252.70.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1180359209210702199Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383668Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1172609619217609619Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1174133260219133260Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat

1 to 10 of 109 rows


Database
Acc Id
Source(s)
NCBI Gene Bp161

Note Type Note Reference