Symbol:
Acsm1 (Ensembl: Acsm2)
Name:
acyl-CoA synthetase medium-chain family member 1 (Ensembl:acyl-CoA synthetase medium-chain family member 2)
RGD ID:
1306813
Description:
Predicted to enable benzoate-CoA ligase activity; decanoate-CoA ligase activity; and long-chain fatty acid-CoA ligase activity. Predicted to be involved in long-chain fatty acid metabolic process. Predicted to act upstream of or within fatty acid biosynthetic process. Predicted to be located in mitochondrial matrix. Orthologous to human ACSM1 (acyl-CoA synthetase medium chain family member 1); PARTICIPATES IN butanoate metabolic pathway; fatty acid beta degradation pathway; valproic acid pharmacokinetics pathway; INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
acyl-coenzyme A synthetase ACSM1, mitochondrial; Bucs1; butyryl Coenzyme A synthetase 1; LOC361638
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 183,417,052 - 183,451,897 (+) NCBI GRCr8 mRatBN7.2 1 173,985,715 - 174,020,565 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 173,984,672 - 174,025,495 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 1 182,301,183 - 182,336,051 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 1 189,487,285 - 189,522,089 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 1 182,223,654 - 182,259,566 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 1 189,359,374 - 189,395,277 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 189,289,957 - 189,395,276 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 196,296,445 - 196,332,449 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.1 1 178,070,783 - 178,079,570 (+) NCBI Celera 1 171,736,091 - 171,771,062 (+) NCBI Celera Cytogenetic Map 1 q35 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Acsm1 Rat (+)-schisandrin B multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of ACSM1 mRNA] CTD PMID:31150632 Acsm1 Rat 1,1-dichloroethene decreases expression ISO Acsm1 (Mus musculus) 6480464 vinylidene chloride results in decreased expression of ACSM1 mRNA CTD PMID:26682919 Acsm1 Rat 1,2-dibromoethane increases expression ISO Acsm1 (Mus musculus) 6480464 Ethylene Dibromide results in increased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat 1-benzofuran affects expression ISO Acsm1 (Mus musculus) 6480464 benzofuran affects the expression of ACSM1 mRNA CTD PMID:17114358 Acsm1 Rat 1-benzofuran increases expression ISO Acsm1 (Mus musculus) 6480464 benzofuran results in increased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat 17alpha-ethynylestradiol multiple interactions ISO Acsm1 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ACSM1 mRNA CTD PMID:17942748 Acsm1 Rat 17beta-estradiol decreases expression ISO Acsm1 (Mus musculus) 6480464 Estradiol results in decreased expression of ACSM1 mRNA CTD PMID:39298647 Acsm1 Rat 17beta-hydroxy-5alpha-androstan-3-one increases expression ISO ACSM1 (Homo sapiens) 6480464 Dihydrotestosterone results in increased expression of ACSM1 mRNA CTD PMID:29581250 Acsm1 Rat 2,2',4,4',5,5'-hexachlorobiphenyl multiple interactions ISO Acsm1 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with 2 more ... CTD PMID:28433925 Acsm1 Rat 2,2-Bis(bromomethyl)propane-1,3-diol decreases expression ISO Acsm1 (Mus musculus) 6480464 2 more ... CTD PMID:17311802 Acsm1 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Acsm1 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin binds to AHR protein] which results in increased expression of ACSM1 mRNA more ... CTD PMID:16214954 more ... Acsm1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO Acsm1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in decreased expression of ACSM1 mRNA CTD PMID:22539624 and PMID:28213091 Acsm1 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Acsm1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of ACSM1 mRNA CTD PMID:21570461 Acsm1 Rat 2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expression ISO Acsm1 (Mus musculus) 6480464 2 more ... CTD PMID:38648751 Acsm1 Rat 2,4-dinitrotoluene affects expression EXP 6480464 2 and 4-dinitrotoluene affects the expression of ACSM1 mRNA CTD PMID:21346803 Acsm1 Rat 2,6-dinitrotoluene affects expression EXP 6480464 2 and 6-dinitrotoluene affects the expression of ACSM1 mRNA CTD PMID:21346803 Acsm1 Rat 2-(chloromethyl)pyridine increases expression ISO Acsm1 (Mus musculus) 6480464 2-chloromethylpyridine results in increased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat 4,4'-diaminodiphenylmethane affects expression ISO Acsm1 (Mus musculus) 6480464 4 and 4'-diaminodiphenylmethane affects the expression of ACSM1 mRNA CTD PMID:18648102 Acsm1 Rat 4,4'-sulfonyldiphenol decreases expression ISO Acsm1 (Mus musculus) 6480464 bisphenol S results in decreased expression of ACSM1 mRNA CTD PMID:39298647 Acsm1 Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of ACSM1 mRNA CTD PMID:24780913 Acsm1 Rat acetamide decreases expression EXP 6480464 acetamide results in decreased expression of ACSM1 mRNA CTD PMID:31881176 Acsm1 Rat aflatoxin B1 decreases expression ISO Acsm1 (Mus musculus) 6480464 Aflatoxin B1 results in decreased expression of ACSM1 mRNA CTD PMID:19770486 Acsm1 Rat aflatoxin B1 increases methylation ISO ACSM1 (Homo sapiens) 6480464 Aflatoxin B1 results in increased methylation of ACSM1 intron CTD PMID:30157460 Acsm1 Rat aflatoxin B1 decreases expression ISO ACSM1 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased expression of ACSM1 mRNA CTD PMID:27153756 Acsm1 Rat Azoxymethane multiple interactions ISO Acsm1 (Mus musculus) 6480464 [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in decreased expression of ACSM1 mRNA CTD PMID:29950665 Acsm1 Rat benzene decreases expression ISO Acsm1 (Mus musculus) 6480464 Benzene results in decreased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat benzo[a]pyrene increases expression ISO Acsm1 (Mus musculus) 6480464 Benzo(a)pyrene results in increased expression of ACSM1 mRNA CTD PMID:19770486 Acsm1 Rat benzo[a]pyrene decreases expression ISO ACSM1 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of ACSM1 mRNA CTD PMID:32234424 Acsm1 Rat benzo[a]pyrene increases methylation ISO ACSM1 (Homo sapiens) 6480464 Benzo(a)pyrene results in increased methylation of ACSM1 exon and Benzo(a)pyrene results in increased methylation of ACSM1 promoter CTD PMID:27901495 Acsm1 Rat bis(2-ethylhexyl) phthalate multiple interactions ISO Acsm1 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with 2 more ... CTD PMID:28433925 Acsm1 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of ACSM1 mRNA CTD PMID:25181051 Acsm1 Rat bisphenol A increases expression ISO Acsm1 (Mus musculus) 6480464 bisphenol A results in increased expression of ACSM1 mRNA CTD PMID:30245210 Acsm1 Rat bisphenol A multiple interactions ISO Acsm1 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with 2 more ... CTD PMID:28433925 Acsm1 Rat bisphenol A increases methylation ISO Acsm1 (Mus musculus) 6480464 bisphenol A results in increased methylation of ACSM1 promoter CTD PMID:27312807 Acsm1 Rat carbon nanotube increases expression ISO Acsm1 (Mus musculus) 6480464 Nanotubes and Carbon analog results in increased expression of ACSM1 mRNA CTD PMID:25554681 Acsm1 Rat carbon nanotube decreases expression ISO Acsm1 (Mus musculus) 6480464 Nanotubes and Carbon results in decreased expression of ACSM1 mRNA CTD PMID:25554681 Acsm1 Rat chloroprene increases expression ISO Acsm1 (Mus musculus) 6480464 Chloroprene results in increased expression of ACSM1 mRNA CTD PMID:23125180 Acsm1 Rat chlorpyrifos decreases expression ISO Acsm1 (Mus musculus) 6480464 Chlorpyrifos results in decreased expression of ACSM1 mRNA CTD PMID:37019170 Acsm1 Rat cisplatin decreases expression EXP 6480464 Cisplatin results in decreased expression of ACSM1 mRNA CTD PMID:22023808 Acsm1 Rat coumarin increases expression ISO Acsm1 (Mus musculus) 6480464 coumarin results in increased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat dextran sulfate multiple interactions ISO Acsm1 (Mus musculus) 6480464 [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in decreased expression of ACSM1 mRNA CTD PMID:29950665 Acsm1 Rat diazinon decreases expression ISO Acsm1 (Mus musculus) 6480464 Diazinon results in decreased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat dicrotophos decreases expression ISO ACSM1 (Homo sapiens) 6480464 dicrotophos results in decreased expression of ACSM1 mRNA CTD PMID:28302478 Acsm1 Rat enzalutamide decreases expression ISO ACSM1 (Homo sapiens) 6480464 enzalutamide results in decreased expression of ACSM1 mRNA CTD PMID:29581250 Acsm1 Rat GW 4064 increases expression ISO Acsm1 (Mus musculus) 6480464 GW 4064 results in increased expression of ACSM1 mRNA CTD PMID:26655953 Acsm1 Rat ketoconazole decreases expression EXP 6480464 Ketoconazole results in decreased expression of ACSM1 mRNA CTD PMID:28263823 Acsm1 Rat lead(0) decreases expression ISO ACSM1 (Homo sapiens) 6480464 Lead results in decreased expression of ACSM1 mRNA CTD PMID:33194959 Acsm1 Rat malathion decreases expression ISO Acsm1 (Mus musculus) 6480464 Malathion results in decreased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat methidathion increases expression ISO Acsm1 (Mus musculus) 6480464 methidathion results in increased expression of ACSM1 mRNA CTD PMID:34813904 Acsm1 Rat N-(1-naphthyl)ethylenediamine decreases expression ISO Acsm1 (Mus musculus) 6480464 N-(1-naphthyl)ethylenediamine results in decreased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat N-Methylolacrylamide increases expression ISO Acsm1 (Mus musculus) 6480464 N-methylolacrylamide results in increased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat N-nitrosodiethylamine decreases expression ISO Acsm1 (Mus musculus) 6480464 Diethylnitrosamine results in decreased expression of ACSM1 mRNA CTD PMID:24535843 Acsm1 Rat N-nitrosomorpholine decreases expression EXP 6480464 N-nitrosomorpholine results in decreased expression of ACSM1 protein CTD PMID:19716841 Acsm1 Rat N-nitrosomorpholine increases expression EXP 6480464 N-nitrosomorpholine results in increased expression of ACSM1 protein CTD PMID:19716841 Acsm1 Rat naphthalene-1,5-diamine affects expression ISO Acsm1 (Mus musculus) 6480464 1 and 5-naphthalenediamine affects the expression of ACSM1 mRNA CTD PMID:17114358 Acsm1 Rat naphthalene-1,5-diamine increases expression ISO Acsm1 (Mus musculus) 6480464 1 and 5-naphthalenediamine results in increased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat nitrofen increases expression EXP 6480464 nitrofen results in increased expression of ACSM1 mRNA CTD PMID:33484710 Acsm1 Rat okadaic acid decreases expression ISO ACSM1 (Homo sapiens) 6480464 Okadaic Acid results in decreased expression of ACSM1 mRNA CTD PMID:38832940 Acsm1 Rat ozone multiple interactions ISO Acsm1 (Mus musculus) 6480464 [Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in increased expression of ACSM1 mRNA CTD PMID:34911549 Acsm1 Rat paracetamol affects expression ISO Acsm1 (Mus musculus) 6480464 Acetaminophen affects the expression of ACSM1 mRNA CTD PMID:17562736 Acsm1 Rat pentachloronitrobenzene increases expression ISO Acsm1 (Mus musculus) 6480464 quintozene results in increased expression of ACSM1 mRNA CTD PMID:17311802 Acsm1 Rat perfluorohexanesulfonic acid decreases expression ISO Acsm1 (Mus musculus) 6480464 perfluorohexanesulfonic acid results in decreased expression of ACSM1 mRNA CTD PMID:21705711 Acsm1 Rat perfluorooctanoic acid decreases expression ISO Acsm1 (Mus musculus) 6480464 perfluorooctanoic acid results in decreased expression of ACSM1 mRNA CTD PMID:17681415 and PMID:30657992 Acsm1 Rat pirinixic acid multiple interactions ISO Acsm1 (Mus musculus) 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in decreased expression of ACSM1 mRNA and [pirinixic acid co-treated with PPARA] results in decreased expression of ACSM1 mRNA CTD PMID:19710929 and PMID:20813756 Acsm1 Rat pirinixic acid decreases expression ISO Acsm1 (Mus musculus) 6480464 pirinixic acid results in decreased expression of ACSM1 mRNA CTD PMID:20813756 and PMID:23811191 Acsm1 Rat potassium dichromate increases expression ISO Acsm1 (Mus musculus) 6480464 Potassium Dichromate results in increased expression of ACSM1 mRNA CTD PMID:23608068 Acsm1 Rat S-(1,2-dichlorovinyl)-L-cysteine increases expression ISO ACSM1 (Homo sapiens) 6480464 S-(1 and 2-dichlorovinyl)cysteine results in increased expression of ACSM1 mRNA CTD PMID:35811015 Acsm1 Rat sodium arsenite increases expression EXP 6480464 sodium arsenite results in increased expression of ACSM1 protein CTD PMID:29459688 Acsm1 Rat sodium arsenite decreases expression ISO Acsm1 (Mus musculus) 6480464 sodium arsenite results in decreased expression of ACSM1 mRNA CTD PMID:36209798 and PMID:37682722 Acsm1 Rat sodium dichromate affects expression EXP 6480464 sodium bichromate affects the expression of ACSM1 mRNA CTD PMID:22110744 Acsm1 Rat tetrachloromethane decreases expression ISO Acsm1 (Mus musculus) 6480464 Carbon Tetrachloride results in decreased expression of ACSM1 mRNA CTD PMID:27339419 and PMID:31919559 Acsm1 Rat tetrachloromethane multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of ACSM1 mRNA] CTD PMID:31150632 Acsm1 Rat tetrachloromethane decreases expression EXP 6480464 Carbon Tetrachloride results in decreased expression of ACSM1 mRNA CTD PMID:31150632 Acsm1 Rat tetracycline decreases expression ISO Acsm1 (Mus musculus) 6480464 Tetracycline results in decreased expression of ACSM1 mRNA CTD PMID:24489787 Acsm1 Rat thioacetamide decreases expression EXP 6480464 Thioacetamide results in decreased expression of ACSM1 mRNA CTD PMID:34492290 Acsm1 Rat titanium dioxide affects expression ISO Acsm1 (Mus musculus) 6480464 titanium dioxide affects the expression of ACSM1 mRNA CTD PMID:23557971 Acsm1 Rat titanium dioxide multiple interactions ISO Acsm1 (Mus musculus) 6480464 [titanium dioxide co-treated with Azoxymethane co-treated with Dextran Sulfate] results in decreased expression of ACSM1 mRNA CTD PMID:29950665 Acsm1 Rat titanium dioxide decreases expression ISO Acsm1 (Mus musculus) 6480464 titanium dioxide results in decreased expression of ACSM1 mRNA CTD PMID:29264374 Acsm1 Rat Triptolide decreases expression EXP 6480464 triptolide results in decreased expression of ACSM1 protein CTD PMID:32519852 Acsm1 Rat valproic acid decreases expression ISO ACSM1 (Homo sapiens) 6480464 Valproic Acid results in decreased expression of ACSM1 mRNA CTD PMID:29501571 Acsm1 Rat vancomycin increases expression ISO Acsm1 (Mus musculus) 6480464 Vancomycin results in increased expression of ACSM1 mRNA CTD PMID:18930951
Imported Annotations - SMPDB
(+)-schisandrin B (EXP) 1,1-dichloroethene (ISO) 1,2-dibromoethane (ISO) 1-benzofuran (ISO) 17alpha-ethynylestradiol (ISO) 17beta-estradiol (ISO) 17beta-hydroxy-5alpha-androstan-3-one (ISO) 2,2',4,4',5,5'-hexachlorobiphenyl (ISO) 2,2-Bis(bromomethyl)propane-1,3-diol (ISO) 2,3,7,8-tetrachlorodibenzodioxine (ISO) 2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO) 2,4-dinitrotoluene (EXP) 2,6-dinitrotoluene (EXP) 2-(chloromethyl)pyridine (ISO) 4,4'-diaminodiphenylmethane (ISO) 4,4'-sulfonyldiphenol (ISO) 6-propyl-2-thiouracil (EXP) acetamide (EXP) aflatoxin B1 (ISO) Azoxymethane (ISO) benzene (ISO) benzo[a]pyrene (ISO) bis(2-ethylhexyl) phthalate (ISO) bisphenol A (EXP,ISO) carbon nanotube (ISO) chloroprene (ISO) chlorpyrifos (ISO) cisplatin (EXP) coumarin (ISO) dextran sulfate (ISO) diazinon (ISO) dicrotophos (ISO) enzalutamide (ISO) GW 4064 (ISO) ketoconazole (EXP) lead(0) (ISO) malathion (ISO) methidathion (ISO) N-(1-naphthyl)ethylenediamine (ISO) N-Methylolacrylamide (ISO) N-nitrosodiethylamine (ISO) N-nitrosomorpholine (EXP) naphthalene-1,5-diamine (ISO) nitrofen (EXP) okadaic acid (ISO) ozone (ISO) paracetamol (ISO) pentachloronitrobenzene (ISO) perfluorohexanesulfonic acid (ISO) perfluorooctanoic acid (ISO) pirinixic acid (ISO) potassium dichromate (ISO) S-(1,2-dichlorovinyl)-L-cysteine (ISO) sodium arsenite (EXP,ISO) sodium dichromate (EXP) tetrachloromethane (EXP,ISO) tetracycline (ISO) thioacetamide (EXP) titanium dioxide (ISO) Triptolide (EXP) valproic acid (ISO) vancomycin (ISO)
Acsm1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 183,417,052 - 183,451,897 (+) NCBI GRCr8 mRatBN7.2 1 173,985,715 - 174,020,565 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 173,984,672 - 174,025,495 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 1 182,301,183 - 182,336,051 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 1 189,487,285 - 189,522,089 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 1 182,223,654 - 182,259,566 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 1 189,359,374 - 189,395,277 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 189,289,957 - 189,395,276 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 196,296,445 - 196,332,449 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.1 1 178,070,783 - 178,079,570 (+) NCBI Celera 1 171,736,091 - 171,771,062 (+) NCBI Celera Cytogenetic Map 1 q35 NCBI
ACSM1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 16 20,623,235 - 20,697,680 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 16 20,623,235 - 20,698,890 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 16 20,634,557 - 20,709,002 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 16 20,542,060 - 20,610,079 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 16 20,542,181 - 20,610,079 NCBI Celera 16 19,944,784 - 20,012,792 (-) NCBI Celera Cytogenetic Map 16 p12.3 NCBI HuRef 16 19,170,264 - 19,238,259 (-) NCBI HuRef CHM1_1 16 20,721,797 - 20,789,834 (-) NCBI CHM1_1 T2T-CHM13v2.0 16 20,554,185 - 20,628,601 (-) NCBI T2T-CHM13v2.0
Acsm1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 7 119,217,035 - 119,261,738 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 7 119,206,249 - 119,261,738 (+) Ensembl GRCm39 Ensembl GRCm38 7 119,617,757 - 119,662,515 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 7 119,607,026 - 119,662,515 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 7 126,761,337 - 126,806,029 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 7 119,408,975 - 119,453,664 (+) NCBI MGSCv36 mm8 Celera 7 119,535,540 - 119,581,084 (+) NCBI Celera Cytogenetic Map 7 F2 NCBI cM Map 7 64.02 NCBI
Acsm1 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955442 4,133,308 - 4,174,330 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955442 4,133,817 - 4,173,932 (+) NCBI ChiLan1.0 ChiLan1.0
LOC100972336 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 18 21,839,853 - 21,904,781 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 16 26,360,417 - 26,419,836 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 16 17,676,986 - 17,735,611 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 16 20,715,678 - 20,758,813 (-) NCBI panpan1.1 PanPan1.1 panPan2
ACSM1 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 5 18,784,055 - 18,841,881 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 5 18,784,210 - 18,842,609 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666068 11,062,924 - 11,121,569 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Acsm1
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1578778 Pur4 Proteinuria QTL 4 3.3 0.003 urine total protein amount (VT:0000032) urine total protein excretion rate (CMO:0000756) 1 150700247 252085048 Rat 1354646 Kidm18 Kidney mass QTL 18 5.7 kidney mass (VT:0002707) calculated kidney weight (CMO:0000160) 1 151162512 256448636 Rat 1578780 Cm52 Cardiac mass QTL 52 3.3 0.0001 heart mass (VT:0007028) heart wet weight (CMO:0000069) 1 81591954 219808434 Rat 2302378 Insul11 Insulin level QTL 11 3.25 blood insulin amount (VT:0001560) serum insulin level (CMO:0000358) 1 144267353 251128347 Rat 1354653 Despr9 Despair related QTL 9 0.00019 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 1 167909849 212909849 Rat 1578770 Stresp23 Stress response QTL 23 kidney sympathetic nerve activity (VT:0004050) stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786) 1 123350408 182418476 Rat 2293673 Bss27 Bone structure and strength QTL 27 18.63 0.0001 femur morphology trait (VT:0000559) femur midshaft cortical cross-sectional area (CMO:0001663) 1 171629477 216629477 Rat 61326 Eae6 Experimental allergic encephalomyelitis QTL 6 5.3 body mass (VT:0001259) change in body weight (CMO:0002045) 1 172949660 181830018 Rat 2293677 Bss41 Bone structure and strength QTL 41 9.38 0.0001 lumbar vertebra size trait (VT:0010518) lumbar vertebra cross-sectional area (CMO:0001689) 1 171629477 216629477 Rat 70160 Bw18 Body weight QTL 18 5.7 body mass (VT:0001259) body weight (CMO:0000012) 1 144267353 196383668 Rat 1549830 Bss1 Bone structure and strength QTL 1 4.8 femur strength trait (VT:0010010) femur ultimate force (CMO:0001675) 1 172609619 217609619 Rat 7794788 Mcs32 Mammary carcinoma susceptibility QTL 32 2.61 mammary gland integrity trait (VT:0010552) mammary tumor incidence/prevalence measurement (CMO:0000946) 1 115540693 238914717 Rat 1354636 Lmblg1 Limb length QTL 1 6.4 tibia length (VT:0004357) tibia length (CMO:0000450) 1 151162512 201278233 Rat 1549837 Hcar15 Hepatocarcinoma resistance QTL 15 0.05 liver integrity trait (VT:0010547) liver tumorous lesion number (CMO:0001068) 1 153136852 260522016 Rat 2293689 Bss47 Bone structure and strength QTL 47 7.25 0.0001 lumbar vertebra size trait (VT:0010518) lumbar vertebra trabecular cross-sectional area (CMO:0001692) 1 171629477 216629477 Rat 152025235 Bw194 Body weight QTL 194 4.86 body mass (VT:0001259) 1 123556856 242907031 Rat 1598853 Memor3 Memory QTL 3 4.5 exploratory behavior trait (VT:0010471) total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443) 1 143506580 212458660 Rat 61341 Bp26 Blood pressure QTL 26 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 169537671 214537671 Rat 1354634 Kidm12 Kidney mass QTL 12 3.9 kidney mass (VT:0002707) right kidney wet weight (CMO:0000082) 1 151162512 201278233 Rat 4889428 Stresp24 Stress response QTL 24 0.05 heart pumping trait (VT:2000009) absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162) 1 155866514 200866514 Rat 152025232 Bw192 Body weight QTL 192 3.93 body mass (VT:0001259) 1 117917486 196963478 Rat 1578759 Uae30 Urinary albumin excretion QTL 30 3.3 0.003 urine albumin amount (VT:0002871) urine albumin excretion rate (CMO:0000757) 1 150700247 252085048 Rat 61343 Bp28 Blood pressure QTL 28 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 151646613 196646613 Rat 2293693 Bss22 Bone structure and strength QTL 22 33.52 0.0001 femur morphology trait (VT:0000559) femur cross-sectional area (CMO:0001661) 1 171629477 216629477 Rat 1358902 Bw47 Body weight QTL 47 1.67 body mass (VT:0001259) body weight (CMO:0000012) 1 90508614 180359386 Rat 2300161 Bmd43 Bone mineral density QTL 43 8.4 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 1 171629477 216629477 Rat 61347 Bp197 Blood pressure QTL 197 4.2 arterial blood pressure trait (VT:2000000) blood pressure measurement (CMO:0000003) 1 158633083 203633083 Rat 61348 Bp30 Blood pressure QTL 30 2.4 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 144017057 197814409 Rat 8655649 Arrd1 Age-related retinal degeneration QTL 1 4.89 retinal layer morphology trait (VT:0003727) percentage of study population developing retinopathy during a period of time (CMO:0002453) 1 100357752 183970443 Rat 2303622 Vencon6 Ventilatory control QTL 6 0.001 respiration trait (VT:0001943) respiration rate (CMO:0000289) 1 154561505 199561505 Rat 631214 Bw61 Body weight QTL61 3.4 0.0001 intramuscular adipose amount (VT:0010044) intramuscular fat area (CMO:0001162) 1 173108781 218108781 Rat 7771612 Cm80 Cardiac mass QTL 80 8.4 heart left ventricle mass (VT:0007031) heart left ventricle weight (CMO:0000776) 1 149448574 221264292 Rat 731168 Bp154 Blood pressure QTL 154 3.4 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 94642644 214537671 Rat 631205 Bp196 Blood pressure QTL 196 4 0.0001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 118944897 199050459 Rat 1300158 Bp173 Blood pressure QTL 173 3.48 arterial blood pressure trait (VT:2000000) blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) 1 115540693 185145286 Rat 2300174 Bmd42 Bone mineral density QTL 42 8.4 0.0001 lumbar vertebra mineral mass (VT:0010511) bone mineral density (CMO:0001226) 1 171629477 216629477 Rat 737828 Hcas3 Hepatocarcinoma susceptibility QTL 3 4.9 liver integrity trait (VT:0010547) liver tumorous lesion volume to total liver volume ratio (CMO:0001082) 1 144267353 222987745 Rat 1331749 Hrtrt11 Heart rate QTL 11 2.973 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 1 94494440 198211706 Rat 1354661 Bw33 Body weight QTL 33 5.2 body mass (VT:0001259) body weight (CMO:0000012) 1 151162512 256448636 Rat 1358886 Bp260 Blood pressure QTL 260 3.67 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 151162766 225824951 Rat 1331751 Bp199 Blood pressure QTL 199 3.60022 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 1 94494440 181830018 Rat 2293654 Bss30 Bone structure and strength QTL 30 32.65 0.0001 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 1 171629477 216629477 Rat 724531 Uae5 Urinary albumin excretion QTL 5 4 urine albumin amount (VT:0002871) urine albumin level (CMO:0000130) 1 150700142 252085212 Rat 2300187 Bmd41 Bone mineral density QTL 41 8.9 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 1 171629477 216629477 Rat 737974 Bp161 Blood pressure QTL 161 0.002 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 164747558 181133855 Rat 1641895 Bp298 Blood pressure QTL 298 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 123350408 182418476 Rat 70209 Niddm23 Non-insulin dependent diabetes mellitus QTL 23 2.82 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 1 94494440 198324465 Rat 1354580 Scort1 Serum corticosterone level QTL 1 3.4 blood corticosterone amount (VT:0005345) blood corticosterone level (CMO:0001172) 1 156677124 256448636 Rat 1358294 Bw37 Body weight QTL 37 5 0.000011 body mass (VT:0001259) body weight (CMO:0000012) 1 171310381 216310381 Rat 634314 Niddm44 Non-insulin dependent diabetes mellitus QTL 44 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 1 49393289 199050459 Rat 61379 Bp44 Blood pressure QTL 44 19.2 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 144267916 174133260 Rat 2312420 Pur17 Proteinuria QTL 17 7.1 0.0001 urine protein amount (VT:0005160) urine total protein excretion rate (CMO:0000756) 1 156677124 218753816 Rat 6893347 Bw98 Body weight QTL 98 0.2 0.53 body mass (VT:0001259) body weight (CMO:0000012) 1 133680936 178680936 Rat 1354591 Cm36 Cardiac mass QTL 36 4.1 heart left ventricle mass (VT:0007031) calculated heart weight (CMO:0000073) 1 102813953 201278233 Rat 724550 Thym3 Thymus enlargement QTL 3 7.82 0.001 thymus mass (VT:0004954) thymus weight to body weight ratio (CMO:0000612) 1 136829932 181829932 Rat 2312558 Glom17 Glomerulus QTL 17 3.9 0.001 kidney glomerulus morphology trait (VT:0005325) index of glomerular damage (CMO:0001135) 1 166532971 191278129 Rat 7421630 Bp362 Blood pressure QTL 362 0.001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 118608292 241799120 Rat 71118 Thym1 Thymus enlargement QTL 1 10.17 0.001 thymus mass (VT:0004954) thymus weight to body weight ratio (CMO:0000612) 1 136829932 181829932 Rat 10059597 Bp377 Blood pressure QTL 377 3.42 0.025 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 32737458 199368955 Rat 619613 Bp77 Blood pressure QTL 77 0.01 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 1 164747424 209747424 Rat 631519 Pia11 Pristane induced arthritis QTL 11 5.3 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 1 136830018 181830018 Rat 619614 Bp78 Blood pressure QTL 78 0.001 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 1 169112897 197261052 Rat 6893361 Bw104 Body weight QTL 104 0.59 0.27 body mass (VT:0001259) body weight (CMO:0000012) 1 133680936 178680936 Rat 724562 Rends1 Renal damage susceptibility QTL 1 0.05 kidney glomerulus integrity trait (VT:0010546) index of glomerular damage (CMO:0001135) 1 169537671 214537671 Rat 2292222 Bp307 Blood pressure QTL 307 3.06 0.0014 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 164310393 213533942 Rat 738006 Anxrr14 Anxiety related response QTL 14 4 0.00035 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 1 130636910 175636910 Rat 2292220 Bp306 Blood pressure QTL 306 3.47 0.00087 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 164310393 243914901 Rat 1558645 Bw55 Body weight QTL 55 3.2 0.004 body mass (VT:0001259) body weight (CMO:0000012) 1 133680936 178680936 Rat 1354615 Cm32 Cardiac mass QTL 32 5.2 heart left ventricle mass (VT:0007031) heart left ventricle wet weight (CMO:0000071) 1 102813953 201278233 Rat 1354610 Bw34 Body weight QTL 34 4.1 body mass (VT:0001259) body weight (CMO:0000012) 1 151162512 256448636 Rat 738028 Anxrr12 Anxiety related response QTL 12 4.9 0.00001 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 1 130636910 175636910 Rat 1354620 Kidm19 Kidney mass QTL 19 4 kidney mass (VT:0002707) calculated kidney weight (CMO:0000160) 1 151162512 201278233 Rat 1354618 Kidm15 Kidney mass QTL 15 5 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 1 156677124 201278233 Rat 631544 Bp84 Blood pressure QTL 84 5.6 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 123350408 181759564 Rat 152025212 Bw190 Body weight QTL 190 5.7 body mass (VT:0001259) 1 123556856 196963478 Rat 631549 Bp89 Blood pressure QTL 89 5.7 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 1 123350581 201284552 Rat 631548 Bp88 Blood pressure QTL 88 5 0.001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 1 156677124 176484451 Rat 1358189 Cstrr1 Cold stress response QTL 1 0.0001 catecholamine amount (VT:0010543) urine norepinephrine level (CMO:0001629) 1 123350408 182418476 Rat 1354606 Bp246 Blood pressure QTL 246 3.6 arterial blood pressure trait (VT:2000000) pulse pressure (CMO:0000292) 1 102813953 218753816 Rat 1354602 Bw35 Body weight QTL 35 12.2 body mass (VT:0001259) body weight (CMO:0000012) 1 151162512 201278233 Rat
RH132692
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 1 174,020,324 - 174,020,517 (+) MAPPER mRatBN7.2 Rnor_6.0 1 189,395,037 - 189,395,229 NCBI Rnor6.0 Rnor_5.0 1 196,332,209 - 196,332,401 UniSTS Rnor5.0 Celera 1 171,770,793 - 171,770,985 UniSTS Cytogenetic Map 1 q35 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSRNOT00000020587 ⟹ ENSRNOP00000020587
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source Rnor_6.0 Ensembl 1 189,289,957 - 189,329,007 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000055083 ⟹ ENSRNOP00000051958
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 1 173,985,596 - 174,020,564 (+) Ensembl Rnor_6.0 Ensembl 1 189,359,853 - 189,395,276 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000080338 ⟹ ENSRNOP00000071674
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 1 173,984,672 - 174,020,334 (+) Ensembl Rnor_6.0 Ensembl 1 189,364,288 - 189,395,065 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000084260 ⟹ ENSRNOP00000074595
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 1 173,985,688 - 174,025,495 (+) Ensembl Rnor_6.0 Ensembl 1 189,328,246 - 189,395,123 (+) Ensembl
RefSeq Acc Id:
NM_001108502 ⟹ NP_001101972
RefSeq Status:
PROVISIONAL
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 1 183,417,052 - 183,451,897 (+) NCBI mRatBN7.2 1 173,985,715 - 174,020,565 (+) NCBI Rnor_6.0 1 189,359,853 - 189,395,277 (+) NCBI Rnor_5.0 1 196,296,445 - 196,332,449 (+) NCBI Celera 1 171,736,091 - 171,771,062 (+) NCBI
Sequence:
AAGTTCCACAGCTGTGTTCCCAGAACTGAAAAGGATTGTGCACAGACCCTACAAGCTTCCTCTCCTAGCTATAGTCTACCTGTGTCCTTCACAGTATCAGTGGACTACCTAAATATGCAGTGGCTGAG
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RefSeq Acc Id:
XM_063267601 ⟹ XP_063123671
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 1 183,421,115 - 183,451,897 (+) NCBI
RefSeq Acc Id:
NP_001101972 ⟸ NM_001108502
- UniProtKB:
B5DFA3 (UniProtKB/TrEMBL), A0A0G2K8G2 (UniProtKB/TrEMBL)
- Sequence:
MQWLRRFLTPLGICKFLHRFSLHRPQLHRWLISGDGAQRWNDYDSPEEFNFASHVLDYWAQMEGEGKRGPGPALWWVNDQGDEIKWSFRELRDLSRRAANVFEQTCGLQHGDRLALILPRVPEWWLVT
hide sequence
Ensembl Acc Id:
ENSRNOP00000071674 ⟸ ENSRNOT00000080338
Ensembl Acc Id:
ENSRNOP00000051958 ⟸ ENSRNOT00000055083
Ensembl Acc Id:
ENSRNOP00000020587 ⟸ ENSRNOT00000020587
Ensembl Acc Id:
ENSRNOP00000074595 ⟸ ENSRNOT00000084260
RefSeq Acc Id:
XP_063123671 ⟸ XM_063267601
- Peptide Label:
isoform X1
RGD ID: 13690353 Promoter ID: EPDNEW_R878 Type: initiation region Name: Acsm2_1 Description: acyl-CoA synthetase medium-chain family member 2 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Alternative Promoters: null; see alsoEPDNEW_R876 Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 1 189,359,874 - 189,359,934 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2013-08-07
Acsm1
acyl-CoA synthetase medium-chain family member 1
Bucs1
butyryl Coenzyme A synthetase 1
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2008-04-30
Bucs1
butyryl Coenzyme A synthetase 1
Bucs1_predicted
butyryl Coenzyme A synthetase 1 (predicted)
'predicted' is removed
2292626 APPROVED
2005-01-12
Bucs1_predicted
butyryl Coenzyme A synthetase 1 (predicted)
Symbol and Name status set to approved
70820 APPROVED
