| 1578778 | Pur4 | Proteinuria QTL 4 | 3.3 | 0.003 | urine total protein amount (VT:0000032) | urine total protein excretion rate (CMO:0000756) | 1 | 150700247 | 252085048 | Rat |
| 1354646 | Kidm18 | Kidney mass QTL 18 | 5.7 | | kidney mass (VT:0002707) | calculated kidney weight (CMO:0000160) | 1 | 151162512 | 256448636 | Rat |
| 1578780 | Cm52 | Cardiac mass QTL 52 | 3.3 | 0.0001 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 1 | 81591954 | 219808434 | Rat |
| 2302378 | Insul11 | Insulin level QTL 11 | 3.25 | | blood insulin amount (VT:0001560) | serum insulin level (CMO:0000358) | 1 | 144267353 | 251128347 | Rat |
| 1354653 | Despr9 | Despair related QTL 9 | | 0.00019 | locomotor behavior trait (VT:0001392) | amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) | 1 | 167909849 | 212909849 | Rat |
| 1578770 | Stresp23 | Stress response QTL 23 | | | kidney sympathetic nerve activity (VT:0004050) | stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786) | 1 | 123350408 | 182418476 | Rat |
| 2293673 | Bss27 | Bone structure and strength QTL 27 | 18.63 | 0.0001 | femur morphology trait (VT:0000559) | femur midshaft cortical cross-sectional area (CMO:0001663) | 1 | 171629477 | 216629477 | Rat |
| 61326 | Eae6 | Experimental allergic encephalomyelitis QTL 6 | 5.3 | | body mass (VT:0001259) | change in body weight (CMO:0002045) | 1 | 172949660 | 181830018 | Rat |
| 2293677 | Bss41 | Bone structure and strength QTL 41 | 9.38 | 0.0001 | lumbar vertebra size trait (VT:0010518) | lumbar vertebra cross-sectional area (CMO:0001689) | 1 | 171629477 | 216629477 | Rat |
| 70160 | Bw18 | Body weight QTL 18 | 5.7 | | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 144267353 | 196383668 | Rat |
| 1549830 | Bss1 | Bone structure and strength QTL 1 | 4.8 | | femur strength trait (VT:0010010) | femur ultimate force (CMO:0001675) | 1 | 172609619 | 217609619 | Rat |
| 7794788 | Mcs32 | Mammary carcinoma susceptibility QTL 32 | 2.61 | | mammary gland integrity trait (VT:0010552) | mammary tumor incidence/prevalence measurement (CMO:0000946) | 1 | 115540693 | 238914717 | Rat |
| 70163 | Bw20 | Body weight QTL 20 | 5.1 | | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 174133260 | 219133260 | Rat |
| 1354636 | Lmblg1 | Limb length QTL 1 | 6.4 | | tibia length (VT:0004357) | tibia length (CMO:0000450) | 1 | 151162512 | 201278233 | Rat |
| 1549837 | Hcar15 | Hepatocarcinoma resistance QTL 15 | | 0.05 | liver integrity trait (VT:0010547) | liver tumorous lesion number (CMO:0001068) | 1 | 153136852 | 260522016 | Rat |
| 2293689 | Bss47 | Bone structure and strength QTL 47 | 7.25 | 0.0001 | lumbar vertebra size trait (VT:0010518) | lumbar vertebra trabecular cross-sectional area (CMO:0001692) | 1 | 171629477 | 216629477 | Rat |
| 152025235 | Bw194 | Body weight QTL 194 | 4.86 | | body mass (VT:0001259) | | 1 | 123556856 | 242907031 | Rat |
| 1598853 | Memor3 | Memory QTL 3 | 4.5 | | exploratory behavior trait (VT:0010471) | total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443) | 1 | 143506580 | 212458660 | Rat |
| 61341 | Bp26 | Blood pressure QTL 26 | | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 169537671 | 214537671 | Rat |
| 1354634 | Kidm12 | Kidney mass QTL 12 | 3.9 | | kidney mass (VT:0002707) | right kidney wet weight (CMO:0000082) | 1 | 151162512 | 201278233 | Rat |
| 4889428 | Stresp24 | Stress response QTL 24 | | 0.05 | heart pumping trait (VT:2000009) | absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162) | 1 | 155866514 | 200866514 | Rat |
| 152025232 | Bw192 | Body weight QTL 192 | 3.93 | | body mass (VT:0001259) | | 1 | 117917486 | 196963478 | Rat |
| 1578759 | Uae30 | Urinary albumin excretion QTL 30 | 3.3 | 0.003 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 1 | 150700247 | 252085048 | Rat |
| 61343 | Bp28 | Blood pressure QTL 28 | | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 151646613 | 196646613 | Rat |
| 2293693 | Bss22 | Bone structure and strength QTL 22 | 33.52 | 0.0001 | femur morphology trait (VT:0000559) | femur cross-sectional area (CMO:0001661) | 1 | 171629477 | 216629477 | Rat |
| 1358902 | Bw47 | Body weight QTL 47 | 1.67 | | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 90508614 | 180359386 | Rat |
| 2300161 | Bmd43 | Bone mineral density QTL 43 | 8.4 | 0.0001 | femur mineral mass (VT:0010011) | volumetric bone mineral density (CMO:0001553) | 1 | 171629477 | 216629477 | Rat |
| 61347 | Bp197 | Blood pressure QTL 197 | 4.2 | | arterial blood pressure trait (VT:2000000) | blood pressure measurement (CMO:0000003) | 1 | 158633083 | 203633083 | Rat |
| 61348 | Bp30 | Blood pressure QTL 30 | 2.4 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 144017057 | 197814409 | Rat |
| 8655649 | Arrd1 | Age-related retinal degeneration QTL 1 | 4.89 | | retinal layer morphology trait (VT:0003727) | percentage of study population developing retinopathy during a period of time (CMO:0002453) | 1 | 100357752 | 183970443 | Rat |
| 2303622 | Vencon6 | Ventilatory control QTL 6 | | 0.001 | respiration trait (VT:0001943) | respiration rate (CMO:0000289) | 1 | 154561505 | 199561505 | Rat |
| 631214 | Bw61 | Body weight QTL61 | 3.4 | 0.0001 | intramuscular adipose amount (VT:0010044) | intramuscular fat area (CMO:0001162) | 1 | 173108781 | 218108781 | Rat |
| 7771612 | Cm80 | Cardiac mass QTL 80 | 8.4 | | heart left ventricle mass (VT:0007031) | heart left ventricle weight (CMO:0000776) | 1 | 149448574 | 221264292 | Rat |
| 731168 | Bp154 | Blood pressure QTL 154 | 3.4 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 94642644 | 214537671 | Rat |
| 631205 | Bp196 | Blood pressure QTL 196 | 4 | 0.0001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 1 | 118944897 | 199050459 | Rat |
| 1300158 | Bp173 | Blood pressure QTL 173 | 3.48 | | arterial blood pressure trait (VT:2000000) | blood pressure time series experimental set point of the baroreceptor response (CMO:0002593) | 1 | 115540693 | 185145286 | Rat |
| 2300174 | Bmd42 | Bone mineral density QTL 42 | 8.4 | 0.0001 | lumbar vertebra mineral mass (VT:0010511) | bone mineral density (CMO:0001226) | 1 | 171629477 | 216629477 | Rat |
| 737828 | Hcas3 | Hepatocarcinoma susceptibility QTL 3 | 4.9 | | liver integrity trait (VT:0010547) | liver tumorous lesion volume to total liver volume ratio (CMO:0001082) | 1 | 144267353 | 222987745 | Rat |
| 1331749 | Hrtrt11 | Heart rate QTL 11 | 2.973 | | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 1 | 94494440 | 198211706 | Rat |
| 1354661 | Bw33 | Body weight QTL 33 | 5.2 | | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 151162512 | 256448636 | Rat |
| 1358886 | Bp260 | Blood pressure QTL 260 | 3.67 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 1 | 151162766 | 225824951 | Rat |
| 1331751 | Bp199 | Blood pressure QTL 199 | 3.60022 | | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 1 | 94494440 | 181830018 | Rat |
| 2293654 | Bss30 | Bone structure and strength QTL 30 | 32.65 | 0.0001 | femur strength trait (VT:0010010) | femur midshaft polar moment of inertia (CMO:0001669) | 1 | 171629477 | 216629477 | Rat |
| 724531 | Uae5 | Urinary albumin excretion QTL 5 | 4 | | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 1 | 150700142 | 252085212 | Rat |
| 2300187 | Bmd41 | Bone mineral density QTL 41 | 8.9 | 0.0001 | femur mineral mass (VT:0010011) | volumetric bone mineral density (CMO:0001553) | 1 | 171629477 | 216629477 | Rat |
| 737974 | Bp161 | Blood pressure QTL 161 | | 0.002 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 1 | 164747558 | 181133855 | Rat |
| 1641895 | Bp298 | Blood pressure QTL 298 | | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 1 | 123350408 | 182418476 | Rat |
| 70209 | Niddm23 | Non-insulin dependent diabetes mellitus QTL 23 | 2.82 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 1 | 94494440 | 198324465 | Rat |
| 1354580 | Scort1 | Serum corticosterone level QTL 1 | 3.4 | | blood corticosterone amount (VT:0005345) | blood corticosterone level (CMO:0001172) | 1 | 156677124 | 256448636 | Rat |
| 1358294 | Bw37 | Body weight QTL 37 | 5 | 0.000011 | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 171310381 | 216310381 | Rat |
| 634314 | Niddm44 | Non-insulin dependent diabetes mellitus QTL 44 | | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 1 | 49393289 | 199050459 | Rat |
| 2312420 | Pur17 | Proteinuria QTL 17 | 7.1 | 0.0001 | urine protein amount (VT:0005160) | urine total protein excretion rate (CMO:0000756) | 1 | 156677124 | 218753816 | Rat |
| 6893347 | Bw98 | Body weight QTL 98 | 0.2 | 0.53 | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 133680936 | 178680936 | Rat |
| 1354591 | Cm36 | Cardiac mass QTL 36 | 4.1 | | heart left ventricle mass (VT:0007031) | calculated heart weight (CMO:0000073) | 1 | 102813953 | 201278233 | Rat |
| 724550 | Thym3 | Thymus enlargement QTL 3 | 7.82 | 0.001 | thymus mass (VT:0004954) | thymus weight to body weight ratio (CMO:0000612) | 1 | 136829932 | 181829932 | Rat |
| 2312558 | Glom17 | Glomerulus QTL 17 | 3.9 | 0.001 | kidney glomerulus morphology trait (VT:0005325) | index of glomerular damage (CMO:0001135) | 1 | 166532971 | 191278129 | Rat |
| 7421630 | Bp362 | Blood pressure QTL 362 | | 0.001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 1 | 118608292 | 241799120 | Rat |
| 71118 | Thym1 | Thymus enlargement QTL 1 | 10.17 | 0.001 | thymus mass (VT:0004954) | thymus weight to body weight ratio (CMO:0000612) | 1 | 136829932 | 181829932 | Rat |
| 10059597 | Bp377 | Blood pressure QTL 377 | 3.42 | 0.025 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 32737458 | 199368955 | Rat |
| 619613 | Bp77 | Blood pressure QTL 77 | | 0.01 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 1 | 164747424 | 209747424 | Rat |
| 631519 | Pia11 | Pristane induced arthritis QTL 11 | 5.3 | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 1 | 136830018 | 181830018 | Rat |
| 619614 | Bp78 | Blood pressure QTL 78 | | 0.001 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 1 | 169112897 | 197261052 | Rat |
| 6893361 | Bw104 | Body weight QTL 104 | 0.59 | 0.27 | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 133680936 | 178680936 | Rat |
| 724562 | Rends1 | Renal damage susceptibility QTL 1 | | 0.05 | kidney glomerulus integrity trait (VT:0010546) | index of glomerular damage (CMO:0001135) | 1 | 169537671 | 214537671 | Rat |
| 2292222 | Bp307 | Blood pressure QTL 307 | 3.06 | 0.0014 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 164310393 | 213533942 | Rat |
| 738006 | Anxrr14 | Anxiety related response QTL 14 | 4 | 0.00035 | locomotor behavior trait (VT:0001392) | amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) | 1 | 130636910 | 175636910 | Rat |
| 2292220 | Bp306 | Blood pressure QTL 306 | 3.47 | 0.00087 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 164310393 | 243914901 | Rat |
| 1558645 | Bw55 | Body weight QTL 55 | 3.2 | 0.004 | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 133680936 | 178680936 | Rat |
| 1354615 | Cm32 | Cardiac mass QTL 32 | 5.2 | | heart left ventricle mass (VT:0007031) | heart left ventricle wet weight (CMO:0000071) | 1 | 102813953 | 201278233 | Rat |
| 1354610 | Bw34 | Body weight QTL 34 | 4.1 | | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 151162512 | 256448636 | Rat |
| 738028 | Anxrr12 | Anxiety related response QTL 12 | 4.9 | 0.00001 | locomotor behavior trait (VT:0001392) | amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) | 1 | 130636910 | 175636910 | Rat |
| 1354620 | Kidm19 | Kidney mass QTL 19 | 4 | | kidney mass (VT:0002707) | calculated kidney weight (CMO:0000160) | 1 | 151162512 | 201278233 | Rat |
| 1354618 | Kidm15 | Kidney mass QTL 15 | 5 | | kidney mass (VT:0002707) | left kidney wet weight (CMO:0000083) | 1 | 156677124 | 201278233 | Rat |
| 631544 | Bp84 | Blood pressure QTL 84 | 5.6 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 123350408 | 181759564 | Rat |
| 152025212 | Bw190 | Body weight QTL 190 | 5.7 | | body mass (VT:0001259) | | 1 | 123556856 | 196963478 | Rat |
| 631549 | Bp89 | Blood pressure QTL 89 | 5.7 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 123350581 | 201284552 | Rat |
| 631548 | Bp88 | Blood pressure QTL 88 | 5 | 0.001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 1 | 156677124 | 176484451 | Rat |
| 1358189 | Cstrr1 | Cold stress response QTL 1 | | 0.0001 | catecholamine amount (VT:0010543) | urine norepinephrine level (CMO:0001629) | 1 | 123350408 | 182418476 | Rat |
| 1354606 | Bp246 | Blood pressure QTL 246 | 3.6 | | arterial blood pressure trait (VT:2000000) | pulse pressure (CMO:0000292) | 1 | 102813953 | 218753816 | Rat |
| 1354602 | Bw35 | Body weight QTL 35 | 12.2 | | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 151162512 | 201278233 | Rat |
| 631670 | Iddm10 | Insulin dependent diabetes mellitus QTL 10 | 1.9 | | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 1 | 174133260 | 196383668 | Rat |
