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Gene: Acsm3 (acyl-CoA synthetase medium-chain family member 3) Rattus norvegicus
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Symbol: Acsm3
Name: acyl-CoA synthetase medium-chain family member 3
Description: Predicted to have acyl-CoA ligase activity; fatty acid ligase activity; and fatty-acyl-CoA synthase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid biosynthetic process. Predicted to localize to the mitochondrial matrix. Used to study hypertension. Biomarker of ocular hypertension. Human ortholog(s) of this gene implicated in IgA glomerulonephritis. Orthologous to human ACSM3 (acyl-CoA synthetase medium chain family member 3); PARTICIPATES IN fatty acid beta degradation pathway; butanoate metabolic pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: acyl-coenzyme A synthetase ACSM3, mitochondrial; butyrate--CoA ligase 3; butyryl coenzyme A synthetase 3; butyryl-coenzyme A synthetase 3; middle-chain acyl-CoA synthetase 3; propionate--CoA ligase; Sa; SA hypertension-associated homolog; SA rat hypertension-associated gene; SA rat hypertension-associated homolog; SA rat hypertension-associated protein; Sah; ssubA
Orthologs:
Is Marker For: Strains:   SHR.WKY-(D1Wox34-Sah)/Njs   BB.SHR-(Acsm3-Igf2)/K  
QTLs:   Bp28   Bp30   Bp44   Bw20   Iddm10  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01189,514,504 - 189,541,233 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1189,514,553 - 189,541,224 (+)Ensembl
Rnor_5.01196,449,042 - 196,475,596 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41178,054,386 - 178,081,751 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11178,212,017 - 178,214,310 (+)NCBI
Celera1171,883,756 - 171,910,443 (+)NCBICelera
Cytogenetic Map1q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Acsm3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 62086
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.