ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regulation of focal adhesion assembly |
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Accession: | GO:0051893
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browse the term
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Definition: | Any process that modulates the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions. |
Synonyms: | related_synonym: | regulation of adhesion plaque assembly |
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Actg1 |
actin, gamma 1 |
involved_in |
ISO IEA |
(PMID:25705373) GO_REF:0000107 |
RGD Ensembl |
PMID:25705373 |
GO_REF:0000107 |
NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232
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Actg1l1 |
actin, gamma 1 like 1 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 3:72,977,767...72,979,691
Ensembl chr10:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232 Ensembl chr 3:105,619,737...105,624,232
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Camsap3 |
calmodulin regulated spectrin-associated protein family, member 3 |
involved_in |
ISO |
(PMID:27693509) |
RGD |
PMID:27693509 |
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NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
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Clasp1 |
cytoplasmic linker associated protein 1 |
involved_in |
ISO |
(PMID:24859005) |
RGD |
PMID:24859005 |
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NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
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Coro1c |
coronin 1C |
involved_in |
ISO |
UniProtKB:Q05397 (PMID:19913511) |
RGD |
PMID:19913511 |
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NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
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Dapk3 |
death-associated protein kinase 3 |
involved_in |
ISO IEA |
(PMID:23454120) GO_REF:0000107 |
RGD Ensembl |
PMID:23454120 |
GO_REF:0000107 |
NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558
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Dusp3 |
dual specificity phosphatase 3 |
involved_in |
ISO |
(PMID:28759036) |
RGD |
PMID:28759036 |
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NCBI chr10:86,920,014...86,933,739
Ensembl chr10:86,920,014...86,933,962
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Efna5 |
ephrin A5 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:11870224) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:11870224 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
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Epha3 |
Eph receptor A3 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:11870224) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:11870224 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
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Gpm6b |
glycoprotein m6b |
involved_in |
ISO ISS |
(PMID:21638316) GO_REF:0000024 |
RGD UniProt |
PMID:21638316 |
GO_REF:0000024 |
NCBI chr X:28,057,788...28,204,409
Ensembl chr X:28,059,450...28,204,211
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Grem1 |
gremlin 1, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:17077323) |
RGD |
PMID:17077323 |
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NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
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Ldb1 |
LIM domain binding 1 |
involved_in |
ISO |
(PMID:19675209) |
RGD |
PMID:19675209 |
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NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
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Limch1 |
LIM and calponin homology domains 1 |
involved_in |
ISO IBA |
(PMID:28228547) GO_REF:0000033 |
RGD GO_Central |
PMID:28228547 |
GO_REF:0000033 |
NCBI chr14:41,112,579...41,425,001
Ensembl chr14:41,114,803...41,425,191
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Macf1 |
microtubule-actin crosslinking factor 1 |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (PMID:18854161) GO_REF:0000033 (PMID:27693509) |
UniProt RGD GO_Central |
PMID:18854161 PMID:27693509 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
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Peak1 |
pseudopodium-enriched atypical kinase 1 |
involved_in |
ISO |
(PMID:23105102) |
RGD |
PMID:23105102 |
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NCBI chr 8:56,605,040...56,819,748
Ensembl chr 8:56,609,015...56,819,096
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Ptk2 |
protein tyrosine kinase 2 |
involved_in |
ISO |
UniProtKB:Q9ULV4 (PMID:19913511) |
RGD |
PMID:19913511 |
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NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
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Ptpra |
protein tyrosine phosphatase, receptor type, A |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:22801373) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:22801373 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:117,650,146...117,759,744
Ensembl chr 3:117,650,183...117,759,728
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Rhod |
ras homolog family member D |
involved_in |
ISO |
(PMID:23454120) |
RGD |
PMID:23454120 |
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NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:201,708,699...201,722,632
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Slk |
STE20-like kinase |
involved_in |
ISO IEA ISS |
(PMID:23128389) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:23128389 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:246,473,712...246,529,643
Ensembl chr 1:246,473,712...246,526,530
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Tsc1 |
TSC complex subunit 1 |
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IMP |
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RGD |
PMID:15611338 |
RGD:1601406 |
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
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Vcl |
vinculin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:26923917) |
Ensembl RGD |
PMID:26923917 |
GO_REF:0000107 |
NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
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Wdpcp |
WD repeat containing planar cell polarity effector |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:5558098 (PMID:24302887) |
Ensembl RGD |
PMID:24302887 |
GO_REF:0000107 |
NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
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Acvrl1 |
activin A receptor like type 1 |
involved_in |
ISO |
(PMID:12453878) |
RGD |
PMID:12453878 |
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NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
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Apod |
apolipoprotein D |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21705670) |
UniProt RGD |
PMID:21705670 |
GO_REF:0000024 |
NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
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Arhgap6 |
Rho GTPase activating protein 6 |
involved_in |
ISO |
(PMID:10699171) |
RGD |
PMID:10699171 |
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NCBI chr X:24,953,464...25,490,003
Ensembl chr X:24,953,464...25,488,663
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Clasp2 |
cytoplasmic linker associated protein 2 |
involved_in |
ISO |
(PMID:24859005) |
RGD |
PMID:24859005 |
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NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
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Coro1c |
coronin 1C |
involved_in |
ISO |
(PMID:19913511) |
RGD |
PMID:19913511 |
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NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179
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Dlc1 |
DLC1 Rho GTPase activating protein |
involved_in |
ISO IEA |
(PMID:19158340) GO_REF:0000107 |
RGD Ensembl |
PMID:19158340 |
GO_REF:0000107 |
NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439
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Dmtn |
dematin actin binding protein |
involved_in |
ISO |
(PMID:18505823) |
RGD |
PMID:18505823 |
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NCBI chr15:45,677,974...45,702,261
Ensembl chr15:45,677,977...45,705,601
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Dusp22 |
dual specificity phosphatase 22 |
involved_in |
ISO |
(PMID:20018849) |
RGD |
PMID:20018849 |
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NCBI chr17:33,780,980...33,831,241
Ensembl chr17:33,780,981...33,831,321
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Fam107a |
family with sequence similarity 107, member A |
involved_in |
ISO IEA ISS |
(PMID:20543869) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:20543869 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
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Itgb1bp1 |
integrin subunit beta 1 binding protein 1 |
involved_in |
ISO IBA |
(PMID:12473654) (PMID:18227284) GO_REF:0000033 |
RGD GO_Central |
PMID:12473654 PMID:18227284 |
GO_REF:0000033 |
NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
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Lrp1 |
LDL receptor related protein 1 |
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IMP |
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RGD |
PMID:20197276 |
RGD:13800550 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
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Mmp14 |
matrix metallopeptidase 14 |
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IDA |
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RGD |
PMID:15044209 |
RGD:1582604 |
NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
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Phldb2 |
pleckstrin homology-like domain, family B, member 2 |
involved_in |
ISO |
(PMID:24859005) |
RGD |
PMID:24859005 |
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NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
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Pten |
phosphatase and tensin homolog |
involved_in |
ISO |
(PMID:9616126) |
RGD |
PMID:9616126 |
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NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
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Rcc2 |
regulator of chromosome condensation 2 |
involved_in |
ISO |
(PMID:19738201) |
RGD |
PMID:19738201 |
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NCBI chr 5:152,994,406...153,017,223
Ensembl chr 5:152,993,665...153,017,205
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Src |
SRC proto-oncogene, non-receptor tyrosine kinase |
involved_in |
IMP |
PMID:21440892 |
BHF-UCL |
PMID:21440892 |
RGD:7248703 |
NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
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Abl1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
involved_in |
ISO |
(PMID:24863063) |
RGD |
PMID:24863063 |
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NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
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Cfl1 |
cofilin 1 |
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IMP |
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RGD |
PMID:24093776 |
RGD:11570550 |
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
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Col16a1 |
collagen type XVI alpha 1 chain |
involved_in |
ISO |
(PMID:24466237) |
RGD |
PMID:24466237 |
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NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
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Enpp2 |
ectonucleotide pyrophosphatase/phosphodiesterase 2 |
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IDA |
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RGD |
PMID:22139091 |
RGD:9685417 |
NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
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Epb41l5 |
erythrocyte membrane protein band 4.1 like 5 |
acts_upstream_of_or_within |
ISO |
MGI:3822451 (PMID:18794329) |
RGD |
PMID:18794329 |
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NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
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Fermt2 |
FERM domain containing kindlin 2 |
involved_in |
ISO |
(PMID:29496737) |
RGD |
PMID:29496737 |
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NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
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Fmn1 |
formin 1 |
acts_upstream_of_or_within |
ISO |
MGI:3800994 (PMID:18560567) |
RGD |
PMID:18560567 |
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NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220
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Hrg |
histidine-rich glycoprotein |
involved_in |
ISO ISS |
(PMID:14744774), (PMID:16436387) GO_REF:0000024 |
RGD UniProt |
PMID:14744774 PMID:16436387 |
GO_REF:0000024 |
NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
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Hrgl1 |
histidine-rich glycoprotein like 1 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
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Iqgap1 |
IQ motif containing GTPase activating protein 1 |
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IMP |
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RGD |
PMID:23657573 |
RGD:11049552 |
NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
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Itgb1bp1 |
integrin subunit beta 1 binding protein 1 |
involved_in |
ISO |
(PMID:17654484) |
RGD |
PMID:17654484 |
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NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
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Kdr |
kinase insert domain receptor |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:12820653) |
Ensembl RGD |
PMID:12820653 |
GO_REF:0000107 |
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Lims1 |
LIM zinc finger domain containing 1 |
involved_in |
ISO |
(PMID:20926685) |
RGD |
PMID:20926685 |
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NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
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Map4k4 |
mitogen-activated protein kinase kinase kinase kinase 4 |
involved_in |
ISO |
(PMID:25490267) |
RGD |
PMID:25490267 |
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NCBI chr 9:42,200,708...42,326,708
Ensembl chr 9:42,200,278...42,326,698
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Myh9 |
myosin, heavy chain 9 |
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IMP |
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RGD |
PMID:21598299 |
RGD:12798522 |
NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
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Myoc |
myocilin |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:18855004) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:18855004 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
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Nrp1 |
neuropilin 1 |
involved_in |
ISO |
(PMID:24863063) |
RGD |
PMID:24863063 |
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NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Poldip2 |
DNA polymerase delta interacting protein 2 |
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IMP |
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RGD |
PMID:30354218 |
RGD:124713558 |
NCBI chr10:63,407,237...63,417,605
Ensembl chr10:63,407,213...63,417,605
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Ppm1f |
protein phosphatase, Mg2+/Mn2+ dependent, 1F |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:20016286) |
UniProt RGD |
PMID:20016286 |
GO_REF:0000024 |
NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340
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Ptpn11 |
protein tyrosine phosphatase, non-receptor type 11 |
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IMP |
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RGD |
PMID:16905534 |
RGD:39456088 |
NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
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Ptprj |
protein tyrosine phosphatase, receptor type, J |
involved_in |
ISO |
(PMID:21091576) |
RGD |
PMID:21091576 |
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NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
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Rac1 |
Rac family small GTPase 1 |
involved_in |
ISO IEA |
(PMID:23129259) GO_REF:0000107 |
RGD Ensembl |
PMID:23129259 |
GO_REF:0000107 |
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
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Rock1 |
Rho-associated coiled-coil containing protein kinase 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:17654484) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:17654484 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
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S100a10 |
S100 calcium binding protein A10 |
involved_in |
ISO IEA |
(PMID:23129259) GO_REF:0000107 |
RGD Ensembl |
PMID:23129259 |
GO_REF:0000107 |
NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
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Sdc4 |
syndecan 4 |
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IMP |
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RGD |
PMID:10504291 |
RGD:2312327 |
NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
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Smad3 |
SMAD family member 3 |
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IDA |
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RGD |
PMID:15987742 |
RGD:2300418 |
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
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Tek |
TEK receptor tyrosine kinase |
involved_in |
ISO |
(PMID:18425120) |
RGD |
PMID:18425120 |
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NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
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Thy1 |
Thy-1 cell surface antigen |
involved_in |
ISO IBA IEA ISS |
(PMID:18346467) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:18346467 PMID:18346467 |
GO_REF:0000033 GO_REF:0000107, RGD:12793016 |
NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
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Tsc1 |
TSC complex subunit 1 |
involved_in |
ISO IEA |
(PMID:10806479) GO_REF:0000107 |
RGD Ensembl |
PMID:10806479 |
GO_REF:0000107 |
NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
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Vegfa |
vascular endothelial growth factor A |
involved_in |
ISO IEA ISS |
(PMID:16489009) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:16489009 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Wnt4 |
Wnt family member 4 |
involved_in |
ISO IEA |
UniProtKB:P01112 (PMID:23027131) GO_REF:0000107 |
RGD Ensembl |
PMID:23027131 |
GO_REF:0000107 |
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
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Term paths to the root
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