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ONTOLOGY REPORT - ANNOTATIONS


Term:cell-matrix adhesion
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Accession:GO:0007160 term browser browse the term
Definition:The binding of a cell to the extracellular matrix via adhesion molecules.



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cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:15361064) RGD PMID:15361064 NCBI chr16:67,022,538...67,101,647
Ensembl chr16:67,022,655...67,100,917
JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO (PMID:21494557) RGD PMID:21494557 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2136636 (MGI:2385816|PMID:9734405) RGD PMID:9734405 MGI:2385816 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Angptl3 angiopoietin-like 3 involved_in ISO UniProtKB:P06756 (PMID:11877390) RGD PMID:11877390 NCBI chr 5:113,703,007...113,710,044
Ensembl chr 5:113,703,012...113,709,957
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 involved_in ISO MGI:3771315 (MGI:5824792|PMID:27553271) RGD PMID:27553271 MGI:5824792 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Bcam basal cell adhesion molecule (Lutheran blood group) involved_in ISO (PMID:16236823) RGD PMID:16236823 NCBI chr 1:79,415,016...79,429,403
Ensembl chr 1:79,415,017...79,429,403
JBrowse link
G Bcan brevican IDA RGD PMID:11208904 RGD:14392798 NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
JBrowse link
G Bcl2l11 Bcl2-like 11 acts_upstream_of_or_within ISO MGI:2156483 (MGI:3703466|PMID:17276340) RGD PMID:17276340 MGI:3703466 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068
JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of
involved_in
ISO
IEA
MGI:2158438 (MGI:3576987|PMID:15860730)
GO_REF:0000107
RGD
Ensembl
PMID:15860730 GO_REF:0000107 MGI:3576987 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO (MGI:707922|PMID:9184077) RGD PMID:9184077 MGI:707922 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Cd34 CD34 molecule involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:106,480,074...106,499,462
Ensembl chr13:106,480,043...106,499,832
JBrowse link
G Cd63 Cd63 molecule involved_in ISO
IEA
ISS
(PMID:23632027)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23632027 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,325,108...1,340,447
Ensembl chr 7:1,325,103...1,399,178
JBrowse link
G Cd96 CD96 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:17847009)
RGD PMID:17847009 PMID:21873635 RGD:13792537 NCBI chr11:54,702,290...54,776,618
Ensembl chr11:54,702,290...54,776,621
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO (MGI:2446382|PMID:12496365) RGD PMID:12496365 MGI:2446382 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cntn2 contactin 2 IDA RGD PMID:2317872 RGD:727707 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain involved_in IBA
ISO
PMID:21873635
UniProtKB:P02751 (PMID:11956183)
RGD PMID:11956183 PMID:21873635 RGD:13792537 NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:16912226) RGD PMID:16912226 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Col5a3 collagen type V alpha 3 chain acts_upstream_of_or_within ISO (MGI:3583053|PMID:15908193) RGD PMID:15908193 MGI:3583053 NCBI chr 8:19,304,564...19,349,809
Ensembl chr 8:19,304,571...19,349,853
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567 (MGI:3051737|PMID:15131783) RGD PMID:15131783 MGI:3051737 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Eda ectodysplasin-A acts_upstream_of_or_within ISO (MGI:1349243|PMID:10534613) RGD PMID:10534613 MGI:1349243 NCBI chr  X:65,078,454...65,480,172
Ensembl chr  X:65,078,673...65,480,172
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (PMID:18463100) RGD PMID:18463100 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:19494199)
UniProt
RGD
PMID:19494199 GO_REF:0000024 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Epdr1 ependymin related 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:45,333,677...45,358,597
Ensembl chr17:45,333,956...45,358,594
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in IBA
ISO
PMID:21873635
(MGI:3789779|PMID:18483218)
(PMID:21325030)
RGD PMID:18483218 PMID:21325030 PMID:21873635 MGI:3789779, RGD:13792537 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Fermt3 FERM domain containing kindlin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:204,189,483...204,207,683
Ensembl chr 1:204,189,484...204,207,587
JBrowse link
G Fga fibrinogen alpha chain involved_in ISO (PMID:10903502) RGD PMID:10903502 NCBI chr 2:168,365,364...168,381,533
Ensembl chr 2:168,374,120...168,381,528
JBrowse link
G Fgb fibrinogen beta chain involved_in ISO
IBA
(PMID:10903502)
PMID:21873635
RGD PMID:10903502 PMID:21873635 RGD:13792537 NCBI chr 2:168,394,901...168,402,863
Ensembl chr 2:168,394,916...168,405,979
JBrowse link
G Fgg fibrinogen gamma chain involved_in IBA
ISO
PMID:21873635
(PMID:10903502)
RGD PMID:10903502 PMID:21873635 RGD:13792537 NCBI chr 2:168,354,880...168,362,325
Ensembl chr 2:168,355,013...168,362,322
JBrowse link
G Fn1 fibronectin 1 acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
(MGI:3577694|PMID:15728191)
PMID:21873635
RGD PMID:15728191 PMID:12388756 PMID:21873635 MGI:3577694, RGD:1358623, RGD:13792537 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Frem1 Fras1 related extracellular matrix 1 acts_upstream_of_or_within ISO MGI:3526691 (MGI:3054130|PMID:15345741) RGD PMID:15345741 MGI:3054130 NCBI chr 5:97,321,275...97,469,523
Ensembl chr 5:97,322,538...97,469,543
JBrowse link
G Gp5 glycoprotein V (platelet) acts_upstream_of_or_within ISO MGI:3623935 (MGI:3691991|PMID:11493449) RGD PMID:11493449 MGI:3691991 NCBI chr11:70,443,613...70,446,705
Ensembl chr11:70,443,613...70,446,705
JBrowse link
G Hoxd3 homeo box D3 involved_in ISO
IEA
(PMID:7742539)
GO_REF:0000107
RGD
Ensembl
PMID:7742539 GO_REF:0000107 NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282
JBrowse link
G Hpse heparanase involved_in ISO
IBA
IEA
(PMID:12773484)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:12773484 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Ilk integrin-linked kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Itga1 integrin subunit alpha 1 involved_in ISO
IBA
(PMID:24823363)
PMID:21873635
RGD PMID:24823363 PMID:21873635 RGD:13792537 NCBI chr 2:46,646,125...46,812,237
Ensembl chr 2:46,653,193...46,812,238
JBrowse link
G Itga10 integrin subunit alpha 10 involved_in ISO
IBA
(PMID:24823363)
PMID:21873635
RGD PMID:24823363 PMID:21873635 RGD:13792537 NCBI chr 2:184,182,869...184,202,172
Ensembl chr 2:184,182,869...184,202,172
JBrowse link
G Itga11 integrin subunit alpha 11 involved_in ISO
IBA
(PMID:11518510), (PMID:24823363)
PMID:21873635
RGD PMID:11518510 PMID:24823363 PMID:21873635 RGD:13792537 NCBI chr 8:63,145,950...63,254,717
Ensembl chr 8:63,146,001...63,254,407
JBrowse link
G Itga2 integrin subunit alpha 2 involved_in ISO
IBA
(PMID:11518510), (PMID:24823363)
PMID:21873635
RGD PMID:11518510 PMID:24823363 PMID:21873635 RGD:13792537 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Itga2b integrin subunit alpha 2b acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3051967|PMID:15031111)
PMID:21873635
RGD PMID:15031111 PMID:21873635 MGI:3051967, RGD:13792537 NCBI chr10:87,408,532...87,426,055
Ensembl chr10:87,408,536...87,426,168
JBrowse link
G Itga3 integrin subunit alpha 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:79,990,160...80,022,206
Ensembl chr10:79,990,161...80,022,118
JBrowse link
G Itga4 integrin subunit alpha 4 involved_in ISO
IBA
(PMID:18308860), (PMID:23986478)
PMID:21873635
RGD PMID:18308860 PMID:23986478 PMID:21873635 RGD:13792537 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
JBrowse link
G Itga5 integrin subunit alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:134,478,963...134,502,837
Ensembl chr 7:134,478,968...134,502,837
JBrowse link
G Itga6 integrin subunit alpha 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3623696|PMID:16365040)
PMID:21873635
RGD PMID:16365040 PMID:21873635 MGI:3623696, RGD:13792537 NCBI chr 3:56,604,512...56,689,428
Ensembl chr 3:56,617,268...56,689,428
JBrowse link
G Itga7 integrin subunit alpha 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:1,360,125...1,388,886
Ensembl chr 7:1,359,940...1,388,450
JBrowse link
G Itga8 integrin subunit alpha 8 involved_in ISO (PMID:24439109) RGD PMID:24439109 NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510
JBrowse link
G Itga9 integrin subunit alpha 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:118,307,424...118,615,527
Ensembl chr 8:118,307,381...118,613,754
JBrowse link
G Itgad integrin subunit alpha D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:182,759,785...182,788,422
Ensembl chr 1:182,759,740...182,788,161
JBrowse link
G Itgae integrin subunit alpha E involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,704,813...57,764,093
Ensembl chr10:57,591,753...57,764,093
JBrowse link
G Itgal integrin subunit alpha L involved_in ISO
IBA
(PMID:19029120)
PMID:21873635
RGD PMID:19029120 PMID:21873635 RGD:13792537 NCBI chr 1:181,918,183...181,955,735
Ensembl chr 1:181,918,183...181,955,732
JBrowse link
G Itgav integrin subunit alpha V involved_in ISO
IBA
(PMID:24658351), (PMID:7525578)
PMID:21873635
RGD PMID:7525578 PMID:24658351 PMID:21873635 RGD:13792537 NCBI chr 3:68,838,524...68,926,653
Ensembl chr 3:68,838,189...68,926,639
JBrowse link
G Itgax integrin subunit alpha X involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:182,709,653...182,740,709
Ensembl chr 1:182,719,609...182,740,698
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within
ISO
IEA
IBA
(PMID:18156211), (PMID:18308860), (PMID:24823363)
GO_REF:0000107
PMID:21873635
MGI:1933825|MGI:2156945|MGI:2684610 (MGI:3699757|PMID:17099249), (MGI:4946895|PMID:21185282)
RGD
Ensembl
PMID:17099249 PMID:18156211 PMID:18308860 PMID:21185282 PMID:24823363 More... GO_REF:0000107 MGI:3699757 MGI:4946895, RGD:13792537 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (PMID:9281591) RGD PMID:9281591 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO
IBA
(PMID:19029120)
PMID:21873635
RGD PMID:19029120 PMID:21873635 RGD:13792537 NCBI chr20:11,061,394...11,097,656
Ensembl chr20:11,061,430...11,097,600
JBrowse link
G Itgb3 integrin subunit beta 3 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:24658351), (PMID:7525578)
GO_REF:0000107
MGI:1933825 (MGI:3699757|PMID:17099249)
RGD
Ensembl
PMID:7525578 PMID:17099249 PMID:24658351 GO_REF:0000107 MGI:3699757 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Itgb4 integrin subunit beta 4 involved_in ISO
IBA
IEA
(PMID:23496044)
PMID:21873635
GO_REF:0000002
GO_REF:0000107
RGD
InterPro
Ensembl
PMID:23496044 PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:13792537 NCBI chr10:101,206,657...101,243,012
Ensembl chr10:101,206,665...101,243,012
JBrowse link
G Itgb5 integrin subunit beta 5 involved_in ISO (PMID:24036928) RGD PMID:24036928 NCBI chr11:66,828,428...66,944,231
Ensembl chr11:66,829,285...66,944,472
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5507902|PMID:23264742)
PMID:21873635
RGD PMID:23264742 PMID:21873635 MGI:5507902, RGD:13792537 NCBI chr 3:45,046,295...45,170,532
Ensembl chr 3:45,048,044...45,121,671
JBrowse link
G Itgb7 integrin subunit beta 7 involved_in ISO
IBA
(PMID:18308860), (PMID:23986478)
PMID:21873635
RGD PMID:18308860 PMID:23986478 PMID:21873635 RGD:13792537 NCBI chr 7:133,347,927...133,364,955
Ensembl chr 7:133,347,960...133,364,876
JBrowse link
G Itgb8 integrin subunit beta 8 NOT|involved_in ISO (PMID:7525578) RGD PMID:7525578 NCBI chr 6:140,124,997...140,208,254
Ensembl chr 6:140,127,203...140,208,476
JBrowse link
G Itgbl1 integrin subunit beta like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:100,780,184...101,041,734
Ensembl chr15:100,780,184...101,041,733
JBrowse link
G Jam3 junctional adhesion molecule 3 acts_upstream_of_or_within ISO MGI:96610|MGI:96612 (MGI:3699757|PMID:17099249) RGD PMID:17099249 MGI:3699757 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G L1cam L1 cell adhesion molecule involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22973895)
Ensembl
UniProt
RGD
PMID:22973895 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857
JBrowse link
G Lims1 LIM zinc finger domain containing 1 acts_upstream_of_or_within ISO MGI:3584172|MGI:3584173 (MGI:3583852|PMID:15976450) RGD PMID:15976450 MGI:3583852 NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
JBrowse link
G Lypd3 Ly6/Plaur domain containing 3 acts_upstream_of_or_within IDA PMID:15729693 MGI PMID:15729693 RGD:8553808 NCBI chr 1:80,226,449...80,230,901
Ensembl chr 1:80,226,449...80,230,901
JBrowse link
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr 7:10,036,301...10,039,703
Ensembl chr 7:10,036,301...10,039,703
JBrowse link
G Mia MIA SH3 domain containing acts_upstream_of_or_within ISO MGI:2159701 (MGI:2158918|PMID:11839810) RGD PMID:11839810 MGI:2158918 NCBI chr 1:82,473,677...82,476,378
Ensembl chr 1:82,473,678...82,475,370
JBrowse link
G Mkln1 muskelin 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:1351271|PMID:9724633)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9724633 GO_REF:0000024 GO_REF:0000107 MGI:1351271 NCBI chr 4:59,815,912...60,124,047
Ensembl chr 4:60,002,464...60,123,993
JBrowse link
G Msln mesothelin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,771,946...14,781,382
Ensembl chr10:14,771,961...14,777,643
JBrowse link
G Mslnl mesothelin-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,755,344...14,771,673
Ensembl chr10:14,759,311...14,771,675
JBrowse link
G Muc4 mucin 4, cell surface associated involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:68,008,245...68,053,229 JBrowse link
G Nid1 nidogen 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2387502|PMID:12243745)
Ensembl
RGD
PMID:12243745 GO_REF:0000107 MGI:2387502 NCBI chr17:86,085,046...86,158,277
Ensembl chr17:86,085,077...86,158,267
JBrowse link
G Nid2 nidogen 2 acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
UniProtKB:P05106|UniProtKB:P08648 (MGI:2387502|PMID:12243745)
PMID:21873635
GO_REF:0000002
GO_REF:0000107
RGD
InterPro
Ensembl
PMID:12243745 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:2387502, RGD:13792537 NCBI chr15:4,458,082...4,513,808
Ensembl chr15:4,458,084...4,513,843
JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO UniProtKB:Q8BPT3 (MGI:2137765|PMID:11470831), (MGI:2153230|PMID:11546798) RGD PMID:11470831 PMID:11546798 MGI:2137765 MGI:2153230 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
JBrowse link
G Otoa otoancorin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5469411 (MGI:5464233|PMID:23129639)
RGD PMID:23129639 PMID:21873635 MGI:5464233, RGD:13792537 NCBI chr 1:175,642,978...175,710,528
Ensembl chr 1:175,642,975...175,710,435
JBrowse link
G Pxn paxillin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:41,060,791...41,107,962
Ensembl chr12:41,060,791...41,107,931
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (MGI:3028433|PMID:1643657) RGD PMID:1643657 MGI:3028433 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Sirpa signal-regulatory protein alpha acts_upstream_of_or_within ISO MGI:2388979 (MGI:2388975|PMID:11118207) RGD PMID:11118207 MGI:2388975 NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098
JBrowse link
G Sned1 sushi, nidogen and EGF-like domains 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:93,774,087...93,834,003
Ensembl chr 9:93,774,119...93,830,694
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2176073|MGI:2450311|MGI:3046779|MGI:3522206|MGI:3764698 (MGI:4834086|PMID:20525922), (MGI:4848276|PMID:20709909), (MGI:4949974|PMID:21401944) RGD PMID:20525922 PMID:20709909 PMID:21401944 MGI:4834086 MGI:4848276 MGI:4949974 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Strc stereocilin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tecta tectorin alpha involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:42,707,962...42,779,726
Ensembl chr 8:42,707,962...42,779,707
JBrowse link
G Tek TEK receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2159358 (MGI:2387759|PMID:9683559) RGD PMID:9683559 MGI:2387759 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 involved_in ISO (PMID:20361982) RGD PMID:20361982 NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
JBrowse link
G Tmem8b transmembrane protein 8B involved_in ISO (PMID:15498789) RGD PMID:15498789 NCBI chr 5:57,919,473...57,948,419
Ensembl chr 5:57,919,804...57,946,772
JBrowse link
G Tnn tenascin N involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2683840|PMID:14531729)
RGD PMID:14531729 PMID:21873635 MGI:2683840, RGD:13792537 NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within ISO MGI:3053791 (MGI:3607885|PMID:12419962) RGD PMID:12419962 MGI:3607885
G Tsc1 TSC complex subunit 1 involved_in ISO (PMID:10806479) RGD PMID:10806479 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link
G Vtn vitronectin involved_in
acts_upstream_of_or_within
ISO
IBA
ComplexPortal:CPX-1795 (PMID:10022831), (PMID:22505472)
PMID:21873635
(MGI:3577694|PMID:15728191)
RGD PMID:10022831 PMID:15728191 PMID:22505472 PMID:21873635 MGI:3577694, RGD:13792537 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
JBrowse link
G Zyx zyxin involved_in ISO (MGI:5582864|PMID:24036928) RGD PMID:24036928 MGI:5582864 NCBI chr 4:71,236,767...71,246,553
Ensembl chr 4:71,237,451...71,246,553
JBrowse link
calcium-dependent cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 IMP RGD PMID:12177244 RGD:2314895 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 acts_upstream_of_or_within ISO (MGI:3613403|PMID:16407977) RGD PMID:16407977 MGI:3613403 NCBI chr 3:114,046,258...114,134,799
Ensembl chr 3:114,046,258...114,135,190
JBrowse link
calcium-independent cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fn1 fibronectin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4397493|PMID:19651211)
Ensembl
RGD
PMID:19651211 GO_REF:0000107 MGI:4397493 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Itgb1 integrin subunit beta 1 acts_upstream_of_or_within ISO UniProtKB:Q70UZ7 (PMID:19651211) RGD PMID:19651211 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Vwa2 von Willebrand factor A domain containing 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:P05556 (MGI:4397493|PMID:19651211)
RGD PMID:19651211 PMID:21873635 MGI:4397493, RGD:13792537 NCBI chr 1:255,922,263...255,963,920
Ensembl chr 1:255,923,541...255,963,934
JBrowse link
cell-matrix adhesion involved in ameboidal cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga4 integrin subunit alpha 4 involved_in ISO (PMID:23986478) RGD PMID:23986478 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
JBrowse link
G Itgb7 integrin subunit beta 7 involved_in ISO (PMID:23986478) RGD PMID:23986478 NCBI chr 7:133,347,927...133,364,955
Ensembl chr 7:133,347,960...133,364,876
JBrowse link
endothelial cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 involved_in ISO (MGI:4418720|PMID:20093484) RGD PMID:20093484 MGI:4418720 NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2677448 (MGI:3723364|PMID:17563397) RGD PMID:17563397 MGI:3723364 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 involved_in ISO
IEA
(PMID:16807302)
GO_REF:0000107
RGD
Ensembl
PMID:16807302 GO_REF:0000107 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Actn2 actinin alpha 2 involved_in ISO (PMID:16807302) RGD PMID:16807302 NCBI chr17:58,143,334...58,210,622
Ensembl chr17:58,142,625...58,210,622
JBrowse link
G Actn3 actinin alpha 3 involved_in ISO (PMID:16807302) RGD PMID:16807302 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO MGI:3578221 (MGI:3577694|PMID:15728191) RGD PMID:15728191 MGI:3577694 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 acts_upstream_of_or_within ISO (MGI:2447568|PMID:10699171) RGD PMID:10699171 MGI:2447568 NCBI chr  X:24,953,464...25,490,003
Ensembl chr  X:24,953,464...25,488,663
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857134 (MGI:3526739|PMID:15292044) RGD PMID:15292044 MGI:3526739 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in ISO (PMID:23940119) RGD PMID:23940119 NCBI chr20:13,471,679...13,596,497
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Coro2b coronin 2B acts_upstream_of_or_within ISO MGI:4419137 (MGI:6110508|PMID:29162887) RGD PMID:29162887 MGI:6110508 NCBI chr 8:62,906,861...63,017,295
Ensembl chr 8:62,906,867...63,017,302
JBrowse link
G Cttn cortactin involved_in IMP PMID:18768925 UniProt PMID:18768925 RGD:10047281 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO MGI:3529997 (MGI:3529660|PMID:15710412) RGD PMID:15710412 MGI:3529660 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21356350)
(MGI:3789779|PMID:18483218)
RGD PMID:18483218 PMID:21356350 MGI:3789779 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:15591055 RGD:8693310 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 IMP RGD PMID:14585963 RGD:1581775 NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISO (PMID:23105102) RGD PMID:23105102 NCBI chr 8:56,605,040...56,819,748
Ensembl chr 8:56,609,015...56,819,096
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha involved_in ISO (PMID:20660631) RGD PMID:20660631 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:14585963 RGD:1581775 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K involved_in ISO (PMID:15899872) RGD PMID:15899872 NCBI chr 1:16,738,896...17,236,687
Ensembl chr 1:16,850,576...17,103,605
JBrowse link
G Pxn paxillin acts_upstream_of_or_within ISO (MGI:2680875|PMID:14636584) RGD PMID:14636584 MGI:2680875 NCBI chr12:41,060,791...41,107,962
Ensembl chr12:41,060,791...41,107,931
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO (PMID:19738201) RGD PMID:19738201 NCBI chr 5:152,994,406...153,017,223
Ensembl chr 5:152,993,665...153,017,205
JBrowse link
G Rhod ras homolog family member D involved_in ISO (PMID:23087206) RGD PMID:23087206 NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:201,708,699...201,722,632
JBrowse link
G Rhpn1 rhophilin, Rho GTPase binding protein 1 acts_upstream_of_or_within ISO MGI:6316664 (MGI:6316493|PMID:25071083) RGD PMID:25071083 MGI:6316493 NCBI chr 7:107,391,948...107,402,713
Ensembl chr 7:107,391,984...107,402,713
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in ISO
ISS
(MGI:1196128|PMID:9461600)
GO_REF:0000024
RGD
UniProt
PMID:9461600 GO_REF:0000024 MGI:1196128 NCBI chr 1:239,107,882...239,330,276
Ensembl chr 1:239,108,777...239,330,169
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:21411625) RGD PMID:21411625 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Ston1 stonin 1 acts_upstream_of_or_within ISO MGI:5788726 (MGI:5699914|PMID:26437238) RGD PMID:26437238 MGI:5699914 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449
JBrowse link
G Taok2 TAO kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:10660600)
Ensembl
RGD
PMID:10660600 GO_REF:0000107 NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613
JBrowse link
G Tesk2 testis associated actin remodelling kinase 2 involved_in IMP PMID:11418599 UniProt PMID:11418599 RGD:727318 NCBI chr 5:130,178,715...130,270,594
Ensembl chr 5:130,185,033...130,271,292
JBrowse link
G Thsd1 thrombospondin type 1 domain containing 1 involved_in ISO (PMID:29069646) RGD PMID:29069646 NCBI chr16:69,771,408...69,804,844
Ensembl chr16:69,771,408...69,801,504
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IDA
IBA
PMID:15093746
PMID:21873635
UniProt
GO_Central
PMID:15093746 PMID:21873635 RGD:8553684, RGD:13792537 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules involved_in ISO (PMID:23087206) RGD PMID:23087206 NCBI chr 1:135,526,363...135,557,091
Ensembl chr 1:135,526,386...135,554,759
JBrowse link
mesangial cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15569314) RGD PMID:15569314 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Cd34 CD34 molecule involved_in IEP PMID:18319274 UniProt PMID:18319274 RGD:8553277 NCBI chr13:106,480,074...106,499,462
Ensembl chr13:106,480,043...106,499,832
JBrowse link
negative regulation of cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer2 alkaline ceramidase 2 involved_in ISO (PMID:18945876) RGD PMID:18945876 NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614
JBrowse link
G Adam15 ADAM metallopeptidase domain 15 involved_in ISO (PMID:22505472) RGD PMID:22505472 NCBI chr 2:174,754,631...174,765,136
Ensembl chr 2:174,754,633...174,765,113
JBrowse link
G Ajap1 adherens junctions associated protein 1 involved_in ISO (PMID:16410724) RGD PMID:16410724 NCBI chr 5:163,907,846...164,021,004
Ensembl chr 5:163,907,847...164,020,317
JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2158438 (MGI:3576987|PMID:15860730) RGD PMID:15860730 MGI:3576987 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase involved_in ISO (PMID:18664494) RGD PMID:18664494 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:10205165) RGD PMID:10205165 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IDA RGD PMID:12837632 RGD:1299196 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Hoxa7 homeobox A7 involved_in ISO
IEA
(PMID:14704364)
GO_REF:0000107
RGD
Ensembl
PMID:14704364 GO_REF:0000107 NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659
JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in ISO
IEA
(PMID:11549580)
GO_REF:0000107
RGD
Ensembl
PMID:11549580 GO_REF:0000107 NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
JBrowse link
G Mir192 microRNA 192 involved_in ISO (PMID:26506238) RGD PMID:26506238 NCBI chr 1:203,564,946...203,565,055
Ensembl chr 1:203,564,946...203,565,055
JBrowse link
G Muc4 mucin 4, cell surface associated IDA RGD PMID:9407114 RGD:2303753 NCBI chr11:68,008,245...68,053,229 JBrowse link
G Myoc myocilin involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17984096)
Ensembl
UniProt
RGD
PMID:17984096 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
JBrowse link
G Nexmif neurite extension and migration factor involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:24071057 PMID:21873635 RGD:13442493, RGD:13792537 NCBI chr  X:69,088,076...69,219,253
Ensembl chr  X:69,088,076...69,112,930
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1339753|MGI:97583 (MGI:3689489|PMID:17053831)
Ensembl
RGD
PMID:17053831 GO_REF:0000107 MGI:3689489 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:97306 (MGI:3689489|PMID:17053831)
Ensembl
RGD
PMID:17053831 GO_REF:0000107 MGI:3689489 NCBI chr 2:32,878,942...32,963,611
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Plet1 placenta expressed transcript 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:4453442|PMID:20130590)
GO_REF:0000024
RGD
UniProt
PMID:20130590 PMID:21873635 GO_REF:0000024 MGI:4453442, RGD:13792537 NCBI chr 8:50,842,210...50,854,015
Ensembl chr 8:50,841,854...50,853,659
JBrowse link
G Postn periostin IDA RGD PMID:15381649 RGD:10040999 NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
JBrowse link
G Rasa1 RAS p21 protein activator 1 involved_in ISO
ISS
IEA
(PMID:8344248)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:8344248 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:15,857,704...15,940,757
Ensembl chr 2:15,857,980...15,940,854
JBrowse link
G Sema3e semaphorin 3E involved_in ISO (MGI:4819325|PMID:20385769) RGD PMID:20385769 MGI:4819325 NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
JBrowse link
G Thbs1 thrombospondin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:17416590)
(PMID:16150726)
RGD PMID:16150726 PMID:17416590 NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
negative regulation of endothelial cell-matrix adhesion via fibronectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir92a1 microRNA 92a-1 involved_in ISO (PMID:19460962) RGD PMID:19460962 NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
JBrowse link
G Mir92a2 microRNA 92a-2 involved_in ISO (PMID:19460962) RGD PMID:19460962 NCBI chr  X:132,421,942...132,422,033
Ensembl chr  X:132,421,942...132,422,033
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in ISO
IEA
(PMID:29101312)
GO_REF:0000107
RGD
Ensembl
PMID:29101312 GO_REF:0000107 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
JBrowse link
negative regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:12453878) RGD PMID:12453878 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Apod apolipoprotein D involved_in ISS
ISO
GO_REF:0000024
(PMID:21705670)
UniProt
RGD
PMID:21705670 GO_REF:0000024 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
JBrowse link
G Arhgap6 Rho GTPase activating protein 6 involved_in ISO (PMID:10699171) RGD PMID:10699171 NCBI chr  X:24,953,464...25,490,003
Ensembl chr  X:24,953,464...25,488,663
JBrowse link
G Bcas3 BCAS3, microtubule associated cell migration factor involved_in ISO (MGI:5582152|PMID:22300583) RGD PMID:22300583 MGI:5582152 NCBI chr10:70,213,710...70,673,080
Ensembl chr10:70,214,098...70,673,080
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Coro1c coronin 1C involved_in ISO (PMID:19913511) RGD PMID:19913511 NCBI chr12:42,712,960...42,785,179
Ensembl chr12:42,712,991...42,785,179
JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein involved_in ISO (PMID:19158340) RGD PMID:19158340 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:3803395|PMID:18505823) RGD PMID:18505823 MGI:3803395 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Dusp22 dual specificity phosphatase 22 involved_in ISO (PMID:20018849) RGD PMID:20018849 NCBI chr17:33,780,980...33,831,540
Ensembl chr17:33,780,981...33,831,321
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISO
ISS
(PMID:20543869)
GO_REF:0000024
RGD
UniProt
PMID:20543869 GO_REF:0000024 NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO
IBA
(PMID:12473654)
PMID:21873635
(MGI:5486544|PMID:18227284)
RGD PMID:12473654 PMID:18227284 PMID:21873635 MGI:5486544, RGD:13792537 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:20197276 RGD:13800550 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Mmp14 matrix metallopeptidase 14 IDA RGD PMID:15044209 RGD:1582604 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:9616126) RGD PMID:9616126 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO (MGI:5551375|PMID:19738201) RGD PMID:19738201 MGI:5551375 NCBI chr 5:152,994,406...153,017,223
Ensembl chr 5:152,993,665...153,017,205
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in IMP PMID:21440892 BHF-UCL PMID:21440892 RGD:7248703 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
negative regulation of smooth muscle cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apod apolipoprotein D involved_in ISS
ISO
GO_REF:0000024
(PMID:21705670)
UniProt
RGD
PMID:21705670 GO_REF:0000024 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305
JBrowse link
G Serpine1 serpin family E member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:8837777)
Ensembl
RGD
PMID:8837777 GO_REF:0000107 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
positive regulation of cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15569314), (PMID:18308860) RGD PMID:15569314 PMID:18308860 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr12:2,707,398...2,716,571
Ensembl chr12:2,707,398...2,716,554
JBrowse link
G Ccl28 C-C motif chemokine ligand 28 involved_in ISO
IBA
(PMID:18308860)
PMID:21873635
RGD PMID:18308860 PMID:21873635 RGD:13792537 NCBI chr 2:51,601,354...51,625,999
Ensembl chr 2:51,601,331...51,625,997
JBrowse link
G Cd36 CD36 molecule involved_in ISO (PMID:17416590) RGD PMID:17416590 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex involved_in ISO UniProtKB:Q86WV1 (MGI:6201899|PMID:12652296) RGD PMID:12652296 MGI:6201899 NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022
JBrowse link
G Cdh13 cadherin 13 involved_in ISO (PMID:17573778) RGD PMID:17573778 NCBI chr19:46,349,562...47,387,462
Ensembl chr19:46,349,430...47,387,459
JBrowse link
G Cdk6 cyclin-dependent kinase 6 involved_in ISO (PMID:10205165) RGD PMID:10205165 NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5314162|PMID:22128142)
UniProt
RGD
PMID:22128142 GO_REF:0000024 MGI:5314162 NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
JBrowse link
G Csf1 colony stimulating factor 1 acts_upstream_of_or_within ISO MGI:97306 (MGI:3689489|PMID:17053831) RGD PMID:17053831 MGI:3689489 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
G Dag1 dystroglycan 1 IMP RGD PMID:9153251 RGD:11541058 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Disc1 DISC1 scaffold protein IMP RGD PMID:20479754 RGD:5509803 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:5486568|PMID:12370193) RGD PMID:12370193 MGI:5486568 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Emp2 epithelial membrane protein 2 acts_upstream_of_or_within ISO (PMID:16216233) RGD PMID:16216233 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Epha1 Eph receptor A1 involved_in ISO (PMID:19118217) RGD PMID:19118217 NCBI chr 4:71,246,409...71,260,920
Ensembl chr 4:71,246,409...71,260,846
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (MGI:5571208|PMID:24681597) RGD PMID:24681597 MGI:5571208 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISO
ISS
(PMID:18205178)
GO_REF:0000024
RGD
UniProt
PMID:18205178 GO_REF:0000024 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:18156211)
GO_REF:0000107
RGD
Ensembl
PMID:18156211 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hpse heparanase involved_in ISO (PMID:12773484) RGD PMID:12773484 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Ilk integrin-linked kinase IMP RGD PMID:18535176 RGD:2301740 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2175913 (MGI:5462513|PMID:22984613)
GO_REF:0000107
RGD
Ensembl
PMID:22984613 GO_REF:0000107 MGI:5462513 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Jup junction plakoglobin involved_in ISO RNAcentral:URS00005A31EB_9606 (PMID:28115160) RGD PMID:28115160 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057
JBrowse link
G Ninj1 ninjurin 1 acts_upstream_of_or_within ISO (MGI:4940188|PMID:19557008) RGD PMID:19557008 MGI:4940188 NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704
JBrowse link
G Plekha2 pleckstrin homology domain containing A2 involved_in ISO (PMID:19786618) RGD PMID:19786618 NCBI chr16:66,938,684...67,000,661
Ensembl chr16:66,939,109...66,999,395
JBrowse link
G Prkcz protein kinase C, zeta IMP vascular smooth muscle cell adhesion to collagen matrix RGD PMID:16113073 RGD:1642674 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO
ISS
(PMID:18765415)
GO_REF:0000024
RGD
UniProt
PMID:18765415 GO_REF:0000024 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (MGI:4942250|PMID:12833140) RGD PMID:12833140 MGI:4942250 NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Skap1 src kinase associated phosphoprotein 1 involved_in ISO UniProtKB:P22646 (PMID:12652296) RGD PMID:12652296 NCBI chr10:81,425,472...81,732,651
Ensembl chr10:81,425,525...81,732,650
JBrowse link
G Spg7 SPG7 matrix AAA peptidase subunit, paraplegin involved_in ISO (PMID:1560826) RGD PMID:1560826 NCBI chr19:51,117,045...51,151,228
Ensembl chr19:51,117,057...51,150,484
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1857518 (MGI:1321047|PMID:9876177) RGD PMID:9876177 MGI:1321047 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IMP
IDA
RGD PMID:29331667 PMID:29331667 RGD:127284861, RGD:127284861 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Utrn utrophin involved_in ISO
IEA
(PMID:19786618)
GO_REF:0000107
RGD
Ensembl
PMID:19786618 GO_REF:0000107 NCBI chr 1:6,720,854...7,224,313
Ensembl chr 1:6,722,594...7,224,313
JBrowse link
G Vegfc vascular endothelial growth factor C acts_upstream_of_or_within ISO (MGI:4820931|PMID:20415667) RGD PMID:20415667 MGI:4820931 NCBI chr16:37,712,408...37,827,657
Ensembl chr16:37,712,262...37,827,848
JBrowse link
positive regulation of endothelial cell-matrix adhesion via fibronectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam6 CEA cell adhesion molecule 6 involved_in ISO (PMID:16204051) RGD PMID:16204051 NCBI chr 1:80,416,531...80,434,668
Ensembl chr 1:80,416,531...80,434,668
JBrowse link
G Dicer1 dicer 1 ribonuclease III IMP RGD PMID:23239824 RGD:149735901 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISO
ISS
(PMID:18205178)
GO_REF:0000024
RGD
UniProt
PMID:18205178 GO_REF:0000024 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
JBrowse link
G Gfus GDP-L-fucose synthase involved_in ISO (PMID:18205178) RGD PMID:18205178 NCBI chr 7:107,612,087...107,617,005
Ensembl chr 7:107,612,094...107,616,948
JBrowse link
G Rin2 Ras and Rab interactor 2 involved_in ISO (PMID:22825554) RGD PMID:22825554 NCBI chr 3:133,086,858...133,303,604
Ensembl chr 3:133,086,749...133,303,604
JBrowse link
G Rras RAS related involved_in ISO (PMID:22825554) RGD PMID:22825554 NCBI chr 1:95,500,582...95,504,362
Ensembl chr 1:95,500,566...95,504,357
JBrowse link
positive regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Cfl1 cofilin 1 IMP RGD PMID:24093776 RGD:11570550 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain involved_in ISO (PMID:24466237) RGD PMID:24466237 NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IDA RGD PMID:22139091 RGD:9685417 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:29496737) RGD PMID:29496737 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3800994 (MGI:3798334|PMID:18560567) RGD PMID:18560567 MGI:3798334 NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220
JBrowse link
G Hrg histidine-rich glycoprotein involved_in ISO
ISS
(PMID:14744774), (PMID:16436387)
GO_REF:0000024
RGD
UniProt
PMID:14744774 PMID:16436387 GO_REF:0000024 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 IMP RGD PMID:23657573 RGD:11049552 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (MGI:5486551|PMID:17654484) RGD PMID:17654484 MGI:5486551 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:12820653)
Ensembl
RGD
PMID:12820653 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in ISO (PMID:20926685) RGD PMID:20926685 NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (MGI:6189265|PMID:25490267) RGD PMID:25490267 MGI:6189265 NCBI chr 9:42,200,708...42,326,708
Ensembl chr 9:42,200,278...42,326,698
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:21598299 RGD:12798522 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Myoc myocilin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:18855004)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18855004 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 IMP RGD PMID:30354218 RGD:124713558 NCBI chr10:63,408,766...63,417,605
Ensembl chr10:63,407,213...63,417,605
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISS
ISO
GO_REF:0000024
(PMID:20016286)
UniProt
RGD
PMID:20016286 GO_REF:0000024 NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IMP RGD PMID:16905534 RGD:39456088 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (PMID:21091576) RGD PMID:21091576 NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
IEA
(PMID:23129259)
GO_REF:0000107
RGD
Ensembl
PMID:23129259 GO_REF:0000107 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5486551|PMID:17654484)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17654484 GO_REF:0000024 GO_REF:0000107 MGI:5486551 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
JBrowse link
G Smad3 SMAD family member 3 IDA RGD PMID:15987742 RGD:2300418 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO (PMID:18425120) RGD PMID:18425120 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO
ISS
(PMID:18346467)
(MGI:3796911|PMID:18346467)
RGD PMID:18346467 PMID:18346467 MGI:3796911, RGD:12793016 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO (PMID:10806479) RGD PMID:10806479 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
ISS
(PMID:16489009)
GO_REF:0000024
RGD
UniProt
PMID:16489009 GO_REF:0000024 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P01112 (MGI:5487484|PMID:23027131)
Ensembl
RGD
PMID:23027131 GO_REF:0000107 MGI:5487484 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
positive regulation of smooth muscle cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (PMID:23782690) RGD PMID:23782690 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 IMP RGD PMID:14970114 RGD:11556214 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
JBrowse link
regulation of cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857134 (MGI:3526739|PMID:15292044) RGD PMID:15292044 MGI:3526739 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Bst1 bone marrow stromal cell antigen 1 involved_in ISO
IEA
(PMID:15328157)
GO_REF:0000107
RGD
Ensembl
PMID:15328157 GO_REF:0000107 NCBI chr14:67,253,706...67,270,203
Ensembl chr14:67,252,998...67,270,180
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388024 (MGI:3609309|PMID:12397034)
Ensembl
RGD
PMID:12397034 GO_REF:0000107 MGI:3609309 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Emp2 epithelial membrane protein 2 involved_in IBA
ISO
PMID:21873635
(MGI:5605959|PMID:12189152)
RGD PMID:12189152 PMID:21873635 MGI:5605959, RGD:13792537 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Mink1 misshapen-like kinase 1 involved_in ISO
IEA
(PMID:15469942)
GO_REF:0000107
RGD
Ensembl
PMID:15469942 GO_REF:0000107 NCBI chr10:55,278,293...55,330,782
Ensembl chr10:55,278,391...55,330,782
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857973 (MGI:3624056|PMID:16554364) RGD PMID:16554364 MGI:3624056 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857478 (MGI:3613255|PMID:16405917)
HGNC-UCL
RGD
PMID:16405917 GO_REF:0000024 MGI:3613255 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
JBrowse link
G Onecut1 one cut homeobox 1 acts_upstream_of_or_within ISO MGI:1891408 (MGI:3763866|PMID:17936262) RGD PMID:17936262 MGI:3763866 NCBI chr 8:75,599,432...75,633,598
Ensembl chr 8:75,599,740...75,627,277
JBrowse link
G Onecut2 one cut homeobox 2 acts_upstream_of_or_within ISO MGI:1196423 (MGI:3763866|PMID:17936262) RGD PMID:17936262 MGI:3763866 NCBI chr18:57,831,647...57,881,287
Ensembl chr18:57,832,111...57,879,629
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:25139353)
(MGI:3577829|PMID:15834429)
Ensembl
RGD
PMID:15834429 PMID:25139353 GO_REF:0000107 MGI:3577829 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:31398719) RGD PMID:31398719 NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO (PMID:9749990) RGD PMID:9749990 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO (PMID:10806479) RGD PMID:10806479 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:25705373) RGD PMID:25705373 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO (PMID:27693509) RGD PMID:27693509 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
JBrowse link
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Coro1c coronin 1C involved_in ISO UniProtKB:Q05397 (PMID:19913511) RGD PMID:19913511 NCBI chr12:42,712,960...42,785,179
Ensembl chr12:42,712,991...42,785,179
JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in ISO (PMID:23454120) RGD PMID:23454120 NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558
JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in ISO (PMID:28759036)
(MGI:6101044|PMID:28759036)
RGD PMID:28759036 MGI:6101044 NCBI chr10:86,920,014...86,933,739
Ensembl chr10:86,920,014...86,933,962
JBrowse link
G Efna5 ephrin A5 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:11870224)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11870224 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Epha3 Eph receptor A3 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:11870224)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11870224 GO_REF:0000024 GO_REF:0000107 NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
JBrowse link
G Gpm6b glycoprotein m6b involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21638316)
Ensembl
UniProt
RGD
PMID:21638316 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:28,057,788...28,204,409
Ensembl chr  X:28,059,450...28,204,211
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:3834346|PMID:17077323) RGD PMID:17077323 MGI:3834346 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Ldb1 LIM domain binding 1 involved_in ISO (MGI:5751678|PMID:19675209) RGD PMID:19675209 MGI:5751678 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
JBrowse link
G Limch1 LIM and calponin homology domains 1 involved_in ISO
IBA
(PMID:28228547)
PMID:21873635
RGD PMID:28228547 PMID:21873635 RGD:13792537 NCBI chr14:41,112,579...41,425,185
Ensembl chr14:41,114,803...41,425,191
JBrowse link
G LOC680875 similar to dystonin isoform 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:107,838,089...107,847,304
Ensembl chr 7:107,838,080...107,845,981
JBrowse link
G Macf1 microtubule-actin crosslinking factor 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3828223|PMID:18854161)
(PMID:27693509)
PMID:21873635
UniProt
RGD
PMID:18854161 PMID:27693509 PMID:21873635 GO_REF:0000024 MGI:3828223, RGD:13792537 NCBI chr 5:135,623,729...135,949,097
Ensembl chr 5:135,623,742...135,945,905
JBrowse link
G Peak1 pseudopodium-enriched atypical kinase 1 involved_in ISO (PMID:23105102) RGD PMID:23105102 NCBI chr 8:56,605,040...56,819,748
Ensembl chr 8:56,609,015...56,819,096
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO UniProtKB:Q9ULV4 (PMID:19913511) RGD PMID:19913511 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptpra protein tyrosine phosphatase, receptor type, A involved_in ISS
ISO
GO_REF:0000024
(MGI:5442237|PMID:22801373)
UniProt
RGD
PMID:22801373 GO_REF:0000024 MGI:5442237 NCBI chr 3:117,650,146...117,759,744
Ensembl chr 3:117,650,183...117,759,728
JBrowse link
G Rhod ras homolog family member D involved_in ISO (MGI:5512821|PMID:23454120) RGD PMID:23454120 MGI:5512821 NCBI chr 1:201,708,699...201,724,405
Ensembl chr 1:201,708,699...201,722,632
JBrowse link
G Slk STE20-like kinase involved_in ISO
ISS
(PMID:23128389)
GO_REF:0000024
RGD
UniProt
PMID:23128389 GO_REF:0000024 NCBI chr 1:246,473,712...246,529,643
Ensembl chr 1:246,473,712...246,526,530
JBrowse link
G Tsc1 TSC complex subunit 1 IMP RGD PMID:15611338 RGD:1601406 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:26923917)
Ensembl
RGD
PMID:26923917 GO_REF:0000107 NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO MGI:5558098 (MGI:5544506|PMID:24302887) RGD PMID:24302887 MGI:5544506 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
JBrowse link
regulation of smooth muscle cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plau plasminogen activator, urokinase involved_in ISO
IEA
(PMID:8837777)
GO_REF:0000107
RGD
Ensembl
PMID:8837777 GO_REF:0000107 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
smooth muscle cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:3629583|PMID:12065315)
(PMID:12065315)
UniProt
Ensembl
RGD
PMID:12065315 GO_REF:0000024 GO_REF:0000107 MGI:3629583 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Vtn vitronectin involved_in ISO (PMID:8837777) RGD PMID:8837777 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
JBrowse link
synaptic membrane adhesion to extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgb1 integrin subunit beta 1 involved_in IC GO_REF:0000036 UniProt GO_REF:0000036 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    cellular process 17431
      cell adhesion 1428
        cell-substrate adhesion 386
          cell-matrix adhesion 239
            calcium-dependent cell-matrix adhesion 2
            calcium-independent cell-matrix adhesion 3
            cell-matrix adhesion involved in ameboidal cell migration + 2
            endothelial cell-matrix adhesion + 11
            focal adhesion assembly + 88
            mesangial cell-matrix adhesion 2
            negative regulation of cell-matrix adhesion + 41
            positive regulation of cell-matrix adhesion + 70
            regulation of cell-matrix adhesion + 138
            smooth muscle cell-matrix adhesion + 7
            synaptic membrane adhesion to extracellular matrix 1
paths to the root