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Gene: S100a10 (S100 calcium binding protein A10) Rattus norvegicus
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Symbol: S100a10
Name: S100 calcium binding protein A10
Description: Predicted to have ion channel binding activity and protein homodimerization activity. Involved in response to drug. Localizes to the endoplasmic reticulum. Predicted to colocalize with the membrane raft. Used to study mental depression. Biomarker of mental depression. Orthologous to human S100A10 (S100 calcium binding protein A10); INTERACTS WITH (+)-schisandrin B; (RS)-amphetamine; 1,3-dinitrobenzene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: annexin II ligand; calpactin I light chain; calpactin-1 light chain; cellular ligand of annexin II; nerve growth factor-induced protein 42C; p10 protein; P11; protein S100-A10; S-100 related protein, clone 42C; S100 calcium binding protein A10 (calpactin); S100 calcium-binding protein A10
Orthologs:
Homo sapiens (human) : S100A10 (S100 calcium binding protein A10)  HGNC  Alliance
Mus musculus (house mouse) : S100a10 (S100 calcium binding protein A10 (calpactin))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : S100a10 (S100 calcium binding protein A10)
Pan paniscus (bonobo/pygmy chimpanzee) : S100A10 (S100 calcium binding protein A10)
Canis lupus familiaris (dog) : S100A10 (S100 calcium binding protein A10)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : S100a10 (S100 calcium binding protein A10)
Sus scrofa (pig) : S100A10 (S100 calcium binding protein A10)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: In the RGSCv3.4 reference assembly (NC_005101.2 bases 186645170 to 186645549), an assembly gap exists in the putative promoter of s100a10; this gap has been filled by GenBank accession JN393207.1. [17 Jun 2014]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02193,892,589 - 193,901,236 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02210,966,302 - 210,974,949 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42186,645,674 - 186,654,321 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12186,595,779 - 186,604,427 (+)NCBI
Celera2171,057,114 - 171,065,762 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on S100a10
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 628655
Created: 2003-02-27
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.