Gene: Lims1 (LIM zinc finger domain containing 1) Rattus norvegicus
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Symbol: Lims1
Name: LIM zinc finger domain containing 1
Description: ENCODES a protein that exhibits protein kinase binding (ortholog); zinc ion binding (ortholog); INVOLVED IN protein heterooligomerization; cell-cell adhesion (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Distal Hereditary Motor Neuropathy, Type VIIA (ortholog); FOUND IN protein-containing complex; cell-cell junction (ortholog); focal adhesion (ortholog); INTERACTS WITH 2,6-dinitrotoluene; 6-propyl-2-thiouracil; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LIM and senescent cell antigen-like domains 1; LIM and senescent cell antigen-like-containing domain protein 1; LIM-type zinc finger domains 1; LOC499443; Pinch1; RGD1560732; similar to LIM and senescent cell antigen-like domains 1
Orthologs:
Homo sapiens (human) : LIMS1 (LIM zinc finger domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Lims1 (LIM and senescent cell antigen-like domains 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lims1 (LIM zinc finger domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : LIMS1 (LIM zinc finger domain containing 1)
Canis lupus familiaris (dog) : LIMS1 (LIM zinc finger domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lims1 (LIM zinc finger domain containing 1)
Sus scrofa (pig) : LIMS1 (LIM zinc finger domain containing 1)
more info ...
Allele / Splice: Lims1Tn(sb-T2/Bart3)2.169Mcwi  
Genetic Models: F344-Lims1Tn(sb-T2/Bart3)2.169Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02027,895,981 - 28,004,767 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02029,715,580 - 29,824,252 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42037,349,188 - 37,397,427 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2027,819,971 - 27,867,155 (+)NCBICelera
Cytogenetic Map20q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
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References - curated
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RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Lims1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560732
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE



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