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ONTOLOGY REPORT - ANNOTATIONS

Term:hindbrain development
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Accession:GO:0030902 term browser browse the term
Definition:The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium).
Synonyms:exact_synonym: rhombencephalon development


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hindbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15872003) Ensembl
MGI		 PMID:15872003 GO_REF:0000107 NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168 		JBrowse link
G BMP5 bone morphogenetic protein 5 involved_in ISO (PMID:10079236) BHF-UCL PMID:10079236 NCBI chr 6:55,302,721...55,425,248
Ensembl chr 6:56,936,850...57,059,519 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:53,509,484...53,606,889
Ensembl chr20:54,788,974...54,885,021 		JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G EN1 engrailed homeobox 1 acts_upstream_of_or_within ISO (PMID:15607945) MGI PMID:15607945 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G EN2 engrailed homeobox 2 acts_upstream_of_or_within ISO (PMID:15607945) MGI PMID:15607945 NCBI chr 7:147,058,349...147,065,038 JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:15829521), (PMID:16651541) MGI PMID:15829521 PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15496441)
(PMID:8575294)		 Ensembl
MGI		 PMID:8575294 PMID:15496441 GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15872003) Ensembl
MGI		 PMID:15872003 GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:15367676) MGI PMID:15367676 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:16368089) MGI PMID:16368089 NCBI chr2B:68,939,341...68,943,516 JBrowse link
G NEUROG3 neurogenin 3 ISO RGD PMID:9130143 RGD:633362 NCBI chr10:66,039,739...66,041,804
Ensembl chr10:68,571,614...68,572,258 		JBrowse link
G NFIB nuclear factor I B acts_upstream_of_or_within ISO (PMID:15632069) MGI PMID:15632069 NCBI chr 9:13,923,516...14,376,264 JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11880342 PMID:20082710 RGD:729590 RGD:8552345 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in ISO (PMID:11318877) UniProt PMID:11318877 NCBI chr10:23,356,165...23,359,579 JBrowse link
G PTN pleiotrophin ISO RGD PMID:9749725 RGD:9831452 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183722)
(PMID:15496441)		 Ensembl
MGI		 PMID:15183722 PMID:15496441 GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SMAD1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15899870) Ensembl
MGI		 PMID:15899870 GO_REF:0000107 NCBI chr 4:137,822,269...137,899,700
Ensembl chr 4:149,481,836...149,558,135 		JBrowse link
G SMAD9 SMAD family member 9 acts_upstream_of_or_within ISO (PMID:15899870) MGI PMID:15899870 NCBI chr13:18,055,427...18,130,571
Ensembl chr13:36,486,597...36,521,646 		JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:16330018) MGI PMID:16330018 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952 		JBrowse link
G TBR1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO (PMID:16540585) MGI PMID:16540585 NCBI chr2B:48,709,687...48,719,382 JBrowse link
G TGFB2 transforming growth factor beta 2 ISO RGD PMID:11231055 RGD:2302116 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:20614471) ParkinsonsUK-UCL PMID:20614471 NCBI chr 1:67,336,009...67,470,265
Ensembl chr 1:69,318,742...69,425,652 		JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:17922007) MGI PMID:17922007 NCBI chr20:22,519,942...22,524,262 JBrowse link
G GATA2 GATA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10357893) Ensembl
MGI		 PMID:10357893 GO_REF:0000107 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G PHOX2B paired like homeobox 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17922007) Ensembl
MGI		 PMID:17922007 GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NHLH2 nescient helix-loop-helix 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17573818) Ensembl
UniProt		 PMID:17573818 GO_REF:0000107 NCBI chr 1:86,719,650...86,727,607
Ensembl chr 1:121,774,940...121,775,347 		JBrowse link
G POU4F1 POU class 4 homeobox 1 acts_upstream_of_or_within ISO (PMID:8955272) MGI PMID:8955272 NCBI chr13:59,821,614...59,829,671 JBrowse link
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:102,443,333...102,455,176
Ensembl chr2A:97,780,242...97,787,341 		JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10970885) Ensembl
MGI		 PMID:10970885 GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5AR1 complement C5a receptor 1 ISO RGD PMID:18635264 RGD:5129699 NCBI chr19:44,293,612...44,310,430
Ensembl chr19:52,950,317...52,966,146 		JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:19682991 RGD:6903898 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685 		JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8855328) Ensembl
MGI		 PMID:8855328 GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CLP1 cleavage factor polyribonucleotide kinase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,898,181...52,902,656
Ensembl chr11:56,368,433...56,373,129 		JBrowse link
G DIXDC1 DIX domain containing 1 ISO RGD PMID:19339625 RGD:2308917 NCBI chr11:106,813,905...106,908,898
Ensembl chr11:110,657,803...110,753,114 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20798045) Ensembl
MGI		 PMID:20798045 GO_REF:0000107 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr 9:76,723,071...76,821,611
Ensembl chr 9:104,849,496...104,925,422 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
G NEUROD2 neuronal differentiation 2 involved_in ISO (PMID:16504944) UniProt PMID:16504944 NCBI chr17:17,680,415...17,685,053 JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10407039) Ensembl
MGI		 PMID:10407039 GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161 		JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within ISO (PMID:24431450) MGI PMID:24431450 NCBI chr12:110,016,364...110,107,462
Ensembl chr12:113,435,669...113,503,762 		JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28556830) Ensembl
MGI		 PMID:28556830 GO_REF:0000107 NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387 		JBrowse link
G GLI1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571625) Ensembl
MGI		 PMID:16571625 GO_REF:0000107 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571625) Ensembl
MGI		 PMID:16571625 GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:30503862) MGI PMID:30503862 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chr21:32,665,361...32,741,592
Ensembl chr21:45,914,665...46,042,990 		JBrowse link
G SMO smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:16571625) MGI PMID:16571625 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048 		JBrowse link
G TRNP1 TMF1 regulated nuclear protein 1 involved_in ISO (PMID:23622239) UniProt PMID:23622239 NCBI chr 1:26,254,688...26,261,918 JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G USP9X ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chr  X:33,535,543...33,683,220
Ensembl chr  X:41,232,041...41,379,910 		JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,850,588...38,886,614
Ensembl chr12:39,744,700...39,780,702 		JBrowse link
G MDK midkine involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) ARUK-UCL PMID:26323690 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20153830) MGI
TreeGrafter		 PMID:20153830 GO_REF:0000118 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SERPINE2 serpin family E member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17409116) Ensembl
MGI		 PMID:17409116 GO_REF:0000107 NCBI chr2B:111,221,317...111,285,491
Ensembl chr2B:229,797,655...229,861,040 		JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G CBLN1 cerebellin 1 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:29,538,723...29,542,625
Ensembl chr16:48,427,645...48,430,512 		JBrowse link
G GRID2 glutamate ionotropic receptor delta type subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:84,663,030...86,170,778
Ensembl chr 4:95,339,460...96,807,748 		JBrowse link
G KNDC1 kinase non-catalytic C-lobe domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17984326) Ensembl
MGI		 PMID:17984326 GO_REF:0000107 Ensembl chr10:134,068,936...134,132,964 JBrowse link
G MTPN myotrophin ISO RGD PMID:8144589 RGD:632797 NCBI chr 7:127,896,148...127,947,122
Ensembl chr 7:140,392,620...140,443,591 		JBrowse link
G NFIX nuclear factor I X involved_in
acts_upstream_of_or_within		 ISO (PMID:23042739)
(PMID:21800304)		 MGI PMID:21800304 PMID:23042739 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:20537373) BHF-UCL PMID:20537373 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277 		JBrowse link
G OPHN1 oligophrenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:57,288,297...57,674,685
Ensembl chr  X:67,359,364...67,739,114 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr12:129,549,399...129,579,087 JBrowse link
G WNT7A Wnt family member 7A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9405095) Ensembl
MGI		 PMID:9405095 GO_REF:0000107 NCBI chr 3:13,733,487...13,797,189
Ensembl chr 3:14,077,839...14,138,386 		JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF5 activating transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,941,480...46,946,697
Ensembl chr19:55,859,476...55,861,708 		JBrowse link
G EGF epidermal growth factor involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10027293) Ensembl
MGI		 PMID:10027293 GO_REF:0000107 NCBI chr 4:102,410,724...102,509,691
Ensembl chr 4:112,977,565...113,076,460 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of ISO (PMID:10027293) MGI PMID:10027293 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177 		JBrowse link
G PSMG1 proteasome assembly chaperone 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20498273) Ensembl
MGI		 PMID:20498273 GO_REF:0000107 NCBI chr21:25,526,270...25,535,005
Ensembl chr21:38,876,026...38,884,027 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24466353) Ensembl
MGI		 PMID:24466353 GO_REF:0000107 NCBI chr 1:7,111,594...7,576,667
Ensembl chr 1:8,351,367...8,648,973 		JBrowse link
G RORA RAR related orphan receptor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of		 IEA
ISO		 (PMID:10027293) Ensembl
MGI		 PMID:10027293 GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G ZNF423 zinc finger protein 423 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27727273) Ensembl
MGI		 PMID:27727273 GO_REF:0000107 NCBI chr16:29,748,405...30,118,999
Ensembl chr16:48,639,118...48,969,727 		JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA2 plexin A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18327254) Ensembl
MGI		 PMID:18327254 GO_REF:0000107 NCBI chr 1:183,600,533...183,848,418
Ensembl chr 1:188,408,048...188,603,208 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) ARUK-UCL PMID:26323690 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:7697385) MGI PMID:7697385 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759 		JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:58,894,939...58,923,176
Ensembl chr10:61,223,925...61,329,657 		JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRK CRK proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19074029) Ensembl
MGI		 PMID:19074029 GO_REF:0000107 NCBI chr17:1,406,335...1,438,587
Ensembl chr17:1,306,509...1,336,569 		JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19074029) Ensembl
MGI		 PMID:19074029 GO_REF:0000107 NCBI chr22:3,141,147...3,177,448
Ensembl chr22:19,632,359...19,668,858 		JBrowse link
G L1CAM L1 cell adhesion molecule ISO RGD PMID:27027721 RGD:401959323 NCBI chr  X:143,412,303...143,437,090
Ensembl chr  X:153,298,690...153,324,228 		JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr10:115,603,040...115,607,245 JBrowse link
G SAMD4B sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) MGI PMID:26609159 NCBI chr19:36,440,769...36,483,953
Ensembl chr19:45,002,848...45,031,649 		JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:2473662) MGI PMID:2473662 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G ATXN2 ataxin 2 acts_upstream_of_or_within ISO (PMID:10973246) MGI PMID:10973246 NCBI chr12:109,024,620...109,174,135
Ensembl chr12:112,419,337...112,566,360 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163)
(PMID:7834360)
(PMID:10630211)		 MGI PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20153830) MGI
TreeGrafter		 PMID:20153830 GO_REF:0000118 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,850,588...38,886,614
Ensembl chr12:39,744,700...39,780,702 		JBrowse link
G FOXP2 forkhead box P2 involved_in ISO (PMID:22133810) MGI PMID:22133810 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
G HERC1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20041218) Ensembl
MGI		 PMID:20041218 GO_REF:0000107 NCBI chr15:42,555,131...42,785,228
Ensembl chr15:60,848,493...61,017,244 		JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr10:98,707,470...98,722,771
Ensembl chr10:102,179,757...102,184,047 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:15345707) MGI PMID:15345707 NCBI chr10:68,286,359...68,321,349
Ensembl chr10:70,810,881...70,828,781 		JBrowse link
G RORA RAR related orphan receptor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8996814) Ensembl
MGI		 PMID:8996814 GO_REF:0000107 NCBI chr15:39,461,553...40,200,118
Ensembl chr15:57,771,735...57,980,460 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:24491816)
(PMID:21937600)		 MGI PMID:21937600 PMID:24491816 NCBI chr18:40,594,124...40,639,720 JBrowse link
G SLC25A46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chr 5:106,106,112...106,132,355
Ensembl chr 5:111,908,842...111,935,029 		JBrowse link
G TOP2A DNA topoisomerase II alpha ISO RGD PMID:11170002 RGD:8693630 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29615573) Ensembl
MGI		 PMID:29615573 GO_REF:0000107 NCBI chr2B:53,140,199...53,220,535
Ensembl chr2B:170,616,444...170,699,471 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30420556) Ensembl
MGI		 PMID:30420556 GO_REF:0000107 NCBI chr22:23,924,628...23,973,282
Ensembl chr22:42,128,224...42,174,850 		JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within ISO (PMID:16906134) MGI PMID:16906134 NCBI chr16:54,727,601...54,763,458
Ensembl chr16:70,086,735...70,121,902 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:16625205)
(PMID:20577052)		 MGI PMID:16625205 PMID:20577052 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398 		JBrowse link
G B4GALT2 beta-1,4-galactosyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19265195) Ensembl
MGI		 PMID:19265195 GO_REF:0000107 NCBI chr 1:43,281,011...43,292,992
Ensembl chr 1:44,652,906...44,664,401 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:1306163) MGI PMID:1306163 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,850,588...38,886,614
Ensembl chr12:39,744,700...39,780,702 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:19816510) BHF-UCL PMID:19816510 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458 		JBrowse link
G KLHL1 kelch like family member 1 acts_upstream_of_or_within ISO (PMID:17005861) MGI PMID:17005861 NCBI chr13:50,906,581...51,335,692
Ensembl chr13:69,691,537...70,118,448 		JBrowse link
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398) MGI PMID:16481398 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17712420) Ensembl
MGI		 PMID:17712420 GO_REF:0000107 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G SEZ6 seizure related 6 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16814779) Ensembl
MGI		 PMID:16814779 GO_REF:0000107 NCBI chr17:27,768,229...27,819,257
Ensembl chr17:28,301,359...28,327,354 		JBrowse link
G SEZ6L seizure related 6 homolog like acts_upstream_of_or_within ISO (PMID:16814779) MGI PMID:16814779 NCBI chr22:7,230,597...7,445,397
Ensembl chr22:25,077,259...25,163,881 		JBrowse link
G SEZ6L2 seizure related 6 homolog like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16814779) Ensembl
MGI		 PMID:16814779 GO_REF:0000107 Ensembl chr16:30,240,276...30,267,689 JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) MGI PMID:17954912 NCBI chr 1:130,579,300...130,589,560
Ensembl chr 1:134,185,385...134,194,851 		JBrowse link
G WHRN whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:85,500,222...85,604,417
Ensembl chr 9:113,863,872...113,966,758 		JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARCN1 archain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20502676) Ensembl
MGI		 PMID:20502676 GO_REF:0000107 NCBI chr11:113,411,166...113,441,792
Ensembl chr11:117,341,427...117,371,589 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24466353) Ensembl
MGI		 PMID:24466353 GO_REF:0000107 NCBI chr 1:7,111,594...7,576,667
Ensembl chr 1:8,351,367...8,648,973 		JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:17409239) MGI PMID:17409239 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G COQ8B coenzyme Q8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,735,725...37,761,160
Ensembl chr19:46,242,576...46,267,503 		JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20231455) Ensembl
MGI		 PMID:20231455 GO_REF:0000107 NCBI chr11:62,042,617...62,086,634
Ensembl chr11:65,365,588...65,409,207 		JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,440,192...168,449,071
Ensembl chr 6:173,534,292...173,544,759 		JBrowse link
G KIF14 kinesin family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:176,156,870...176,223,093
Ensembl chr 1:180,462,578...180,526,323 		JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:7182074 RGD:10047093 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420 		JBrowse link
G ACVR1C activin A receptor type 1C ISO RGD PMID:8940033 RGD:631880 NCBI chr2B:44,785,808...44,883,977
Ensembl chr2B:162,034,161...162,124,151 		JBrowse link
G AIF1 allograft inflammatory factor 1 ISO RGD PMID:9698327 RGD:704401 NCBI chr 6:31,276,215...31,278,051
Ensembl chr 6:32,166,301...32,168,125 		JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:98,987,348...98,997,252
Ensembl chr 9:127,657,338...127,678,245 		JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:9920788 RGD:632499 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900 		JBrowse link
G AMIGO2 adhesion molecule with Ig like domain 2 ISO RGD PMID:12843293 RGD:1299593 NCBI chr12:41,652,954...41,656,393
Ensembl chr12:42,525,858...42,527,426 		JBrowse link
G ARHGAP32 Rho GTPase activating protein 32 ISO RGD PMID:23226367 RGD:151665335 NCBI chr11:123,780,028...124,096,494
Ensembl chr11:127,684,622...127,909,822 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:7057182 RGD:2301991 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:16880690) MGI PMID:16880690 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G ATRN attractin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18064672) Ensembl
MGI		 PMID:18064672 GO_REF:0000107 NCBI chr20:3,556,445...3,733,322
Ensembl chr20:3,315,278...3,486,628 		JBrowse link
G CCR1 C-C motif chemokine receptor 1 ISO RGD PMID:12541321 RGD:5688179 NCBI chr 3:46,107,526...46,114,229
Ensembl chr 3:47,214,688...47,215,755 		JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11226314) Ensembl
MGI		 PMID:11226314 GO_REF:0000107 NCBI chr 7:142,640,630...142,644,785
Ensembl chr 7:154,793,344...154,797,499 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11226314)
(PMID:11517264)		 Ensembl
MGI		 PMID:11226314 PMID:11517264 GO_REF:0000107 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr2B:106,217,926...106,220,444 JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A ISO RGD PMID:9693786 RGD:8552681 NCBI chr 9:21,803,862...21,831,322 JBrowse link
G CEND1 cell cycle exit and neuronal differentiation 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
G CKB creatine kinase B ISO RGD PMID:12093362 RGD:625711 NCBI chr14:84,145,931...84,149,093 JBrowse link
G CNTN1 contactin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18354028) Ensembl
MGI		 PMID:18354028 GO_REF:0000107 NCBI chr12:47,630,295...48,014,766
Ensembl chr12:48,492,564...48,670,126 		JBrowse link
G CNTNAP2 contactin associated protein 2 involved_in ISO (PMID:32675284) MGI PMID:32675284 NCBI chr 7:137,858,607...140,150,820
Ensembl chr 7:150,345,240...152,626,818 		JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25877302) Ensembl
MGI		 PMID:25877302 GO_REF:0000107 NCBI chr 5:73,122,305...73,265,343
Ensembl chr 5:78,402,466...78,544,807 		JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16820012 RGD:5131267 NCBI chr 7:31,265,619...31,313,902
Ensembl chr 7:31,386,026...31,434,220 		JBrowse link
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:16329132 RGD:1599699 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164 		JBrowse link
G EN1 engrailed homeobox 1 involved_in ISO (PMID:8848044) ParkinsonsUK-UCL PMID:8848044 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:18565716 RGD:13204724 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:16542644 RGD:1601098 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G FAIM2 Fas apoptotic inhibitory molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,850,588...38,886,614
Ensembl chr12:39,744,700...39,780,702 		JBrowse link
G FCGR2B Fc gamma receptor IIb involved_in ISO (PMID:17502348) ARUK-UCL PMID:17502348 NCBI chr 1:137,074,342...137,090,962
Ensembl chr 1:140,882,043...140,890,637 		JBrowse link
G FOXC1 forkhead box C1 involved_in ISO (PMID:19668217) UniProt PMID:19668217 NCBI chr 6:1,429,051...1,433,180 JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:17619227)
(PMID:15983371)		 MGI PMID:15983371 PMID:17619227 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 acts_upstream_of_or_within ISO (PMID:17983671) MGI PMID:17983671 NCBI chr15:3,129,481...3,357,495
Ensembl chr15:23,981,359...24,058,357 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:7057182 RGD:2301991 NCBI chr21:19,871,656...19,909,893
Ensembl chr21:33,244,457...33,282,331 		JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G GDF10 growth differentiation factor 10 ISO RGD PMID:8605043 RGD:631791 NCBI chr10:46,498,600...46,511,933 JBrowse link
G GLUD1 glutamate dehydrogenase 1 ISO RGD PMID:7182074 RGD:10047093 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GPX4 glutathione peroxidase 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24599700) MGI
Ensembl		 PMID:24599700 GO_REF:0000107 NCBI chr19:20,904...23,828 JBrowse link
G HAP1 huntingtin associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,578,658...15,596,313
Ensembl chr17:15,797,949...15,810,299 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:19115409 RGD:10041070 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22102872 RGD:10002783 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9764759 RGD:10059383 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21443795 PMID:23397157 RGD:10403039 RGD:12904969 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974 		JBrowse link
G INSR insulin receptor ISO RGD PMID:23397157 RGD:10403039 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889 		JBrowse link
G KCNC1 potassium voltage-gated channel subfamily C member 1 ISO RGD PMID:9526005 RGD:9685724 NCBI chr11:17,788,010...17,936,591
Ensembl chr11:17,472,158...17,517,892 		JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr10:98,707,470...98,722,771
Ensembl chr10:102,179,757...102,184,047 		JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LHX5 LIM homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17664423) Ensembl
MGI		 PMID:17664423 GO_REF:0000107 NCBI chr12:111,063,466...111,075,445
Ensembl chr12:114,445,766...114,454,960 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1638738) Ensembl
MGI		 PMID:1638738 GO_REF:0000107 NCBI chr 1:140,634,117...140,788,567
Ensembl chr 1:144,422,789...144,579,027 		JBrowse link
G LOC100978919 T-cell surface glycoprotein CD3 epsilon chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,142,200...113,153,928
Ensembl chr11:117,074,041...117,085,625 		JBrowse link
G LPAR1 lysophosphatidic acid receptor 1 ISO RGD PMID:9753172 RGD:2317716 NCBI chr 9:82,013,960...82,179,227
Ensembl chr 9:110,179,600...110,279,038 		JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within ISO (PMID:18571096) RGD
MGI		 PMID:14751287 PMID:18571096 RGD:12743658 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854 		JBrowse link
G MYO16 myosin XVI involved_in ISO PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr13:89,754,451...90,338,658
Ensembl chr13:108,922,993...109,473,752 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:10803578 PMID:15876152 RGD:2293531 RGD:5688232 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:10803578 RGD:2293531 NCBI chr20:43,838,227...43,992,407
Ensembl chr20:45,000,422...45,073,549 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:10803578 RGD:2293531 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:10803578 RGD:2293531 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NCSTN nicastrin ISO RGD PMID:16298244 RGD:13801190 NCBI chr 1:135,697,592...135,713,293
Ensembl chr 1:139,618,229...139,633,911 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISO (PMID:10398678) RGD
UniProt		 PMID:10398678 PMID:12242038 RGD:1625048 NCBI chr2B:68,939,341...68,943,516 JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:21800304) MGI PMID:21800304 NCBI chr19:12,557,020...12,660,316
Ensembl chr19:13,327,690...13,402,406 		JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 involved_in ISO (PMID:20393820) UniProt PMID:20393820 NCBI chr 3:14,869,292...14,973,977
Ensembl chr 3:15,220,110...15,306,242 		JBrowse link
G NTM neurotrimin ISO RGD PMID:12373100 RGD:2314481 NCBI chr11:126,189,660...127,154,890
Ensembl chr11:130,617,876...131,037,876 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 ISO RGD PMID:20395366 RGD:11533946 NCBI chr11:72,372,577...72,524,817
Ensembl chr11:76,015,998...76,104,197 		JBrowse link
G PAX6 paired box 6 ISO RGD PMID:11688562 RGD:8552644 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PDSS2 decaprenyl diphosphate synthase subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:104,963,942...105,272,807
Ensembl chr 6:108,833,223...109,137,055 		JBrowse link
G PFDN1 prefoldin subunit 1 acts_upstream_of_or_within ISO (PMID:18566413) MGI PMID:18566413 NCBI chr 5:135,611,791...135,669,895
Ensembl chr 5:141,729,128...141,786,822 		JBrowse link
G PIANP PILR alpha associated neural protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31511635) MGI
Ensembl		 PMID:31511635 GO_REF:0000107 NCBI chr12:6,824,377...6,832,971
Ensembl chr12:6,742,251...6,748,741 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:17335037 RGD:10059646 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212 		JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:15763176 RGD:7777107 NCBI chr10:47,642,312...48,935,188
Ensembl chr10:49,779,211...51,064,882 		JBrowse link
G PSEN1 presenilin 1 ISO RGD PMID:16298244 RGD:13801190 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 ISO RGD PMID:9917071 RGD:10045971 NCBI chr 1:99,382,924...99,474,053
Ensembl chr 1:98,105,913...98,196,723 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in ISO (PMID:15543146) UniProt PMID:15543146 NCBI chr10:23,356,165...23,359,579 JBrowse link
G PTN pleiotrophin ISO RGD PMID:8653419 RGD:10043831 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15842738) Ensembl
MGI		 PMID:15842738 GO_REF:0000107 NCBI chr19:4,227,038...4,361,958
Ensembl chr19:5,168,599...5,247,778 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24466353) Ensembl
MGI		 PMID:24466353 GO_REF:0000107 NCBI chr 1:7,111,594...7,576,667
Ensembl chr 1:8,351,367...8,648,973 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17558409) Ensembl
MGI		 PMID:17558409 GO_REF:0000107 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174 		JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO RGD PMID:22331407 RGD:6484221 NCBI chr 3:38,444,421...38,546,364
Ensembl chr 3:38,728,897...38,812,202 		JBrowse link
G SDF4 stromal cell derived factor 4 involved_in ISO PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427
G SEMA4C semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:102,443,333...102,455,176
Ensembl chr2A:97,780,242...97,787,341 		JBrowse link
G SSTR1 somatostatin receptor 1 ISO RGD PMID:9166718 RGD:2325007 NCBI chr14:18,968,969...18,973,560
Ensembl chr14:37,329,309...37,330,484 		JBrowse link
G SSTR2 somatostatin receptor 2 ISO RGD PMID:9166718 RGD:2325007 NCBI chr17:67,093,013...67,099,086
Ensembl chr17:72,553,506...72,554,615 		JBrowse link
G SSTR3 somatostatin receptor 3 ISO RGD PMID:9166718 RGD:2325007 NCBI chr22:18,116,993...18,125,170
Ensembl chr22:35,954,232...35,955,488 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24013501) Ensembl
MGI		 PMID:24013501 GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TTBK2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) ARUK-UCL PMID:26323690 NCBI chr15:21,699,674...21,877,481
Ensembl chr15:39,861,102...40,034,982 		JBrowse link
G TTC21B tetratricopeptide repeat domain 21B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29615573) Ensembl
MGI		 PMID:29615573 GO_REF:0000107 NCBI chr2B:53,140,199...53,220,535
Ensembl chr2B:170,616,444...170,699,471 		JBrowse link
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chr 1:219,660,496...219,669,134
Ensembl chr 1:225,042,281...225,050,259 		JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:11344116) MGI PMID:11344116 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20980600) Ensembl
MGI		 PMID:20980600 GO_REF:0000107 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 1:154,586,423...154,711,621
Ensembl chr 1:158,280,994...158,313,915 		JBrowse link
G CBS cystathionine beta-synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16160063) Ensembl
MGI		 PMID:16160063 GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:11456442) MGI PMID:11456442 NCBI chr 9:58,079,700...58,082,849
Ensembl chr 9:86,139,009...86,140,045 		JBrowse link
G GNPAT glyceronephosphate O-acyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19270340) Ensembl
MGI		 PMID:19270340 GO_REF:0000107 NCBI chr 1:206,794,245...206,830,840
Ensembl chr 1:211,819,259...211,855,885 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:17166916) MGI PMID:17166916 NCBI chr 9:97,730,850...97,820,554
Ensembl chr 9:126,240,722...126,322,420 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008) MGI PMID:11029008 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chr18:40,594,124...40,639,720 JBrowse link
G XRCC1 X-ray repair cross complementing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:40,485,052...40,522,188
Ensembl chr19:49,094,014...49,125,520 		JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAB1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9338785) Ensembl
MGI		 PMID:9338785 GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:19816510) BHF-UCL PMID:19816510 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458 		JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD4 frizzled class receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:81,973,680...82,007,733
Ensembl chr11:85,611,989...85,616,065 		JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11027399) Ensembl
MGI		 PMID:11027399 GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G SCRIB scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 8:140,544,797...140,571,078
Ensembl chr 8:143,557,722...143,582,353 		JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20215345) Ensembl
MGI		 PMID:20215345 GO_REF:0000107 NCBI chr 4:101,937,119...102,043,038
Ensembl chr 4:112,534,779...112,628,065 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr 3:27,261,155...27,373,223
Ensembl chr 3:27,591,639...27,670,815 		JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:8102800) MGI PMID:8102800 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8898234) Ensembl
MGI		 PMID:8898234 GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL13B ARF like GTPase 13B involved_in ISO (PMID:23817546) UniProt PMID:23817546 NCBI chr 3:91,044,332...91,121,686
Ensembl chr 3:97,725,136...97,799,932 		JBrowse link
G FLNA filamin A ISO RGD PMID:22076441 RGD:11564351 NCBI chr  X:143,799,088...143,825,282 JBrowse link
G ITGB1 integrin subunit beta 1 acts_upstream_of_or_within ISO (PMID:21185282) MGI PMID:21185282 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14715945) Ensembl
MGI		 PMID:14715945 GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:14715945) MGI PMID:14715945 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973 		JBrowse link
fourth ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:119,027,633...119,183,779
Ensembl chr12:122,401,296...122,555,246 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:16481398)
(PMID:11283949)		 MGI PMID:11283949 PMID:16481398 NCBI chr17:43,023,922...43,180,159
Ensembl chr17:47,761,322...47,911,192 		JBrowse link
hindbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLC1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chr 8:12,282,190...12,809,770
Ensembl chr 8:9,037,742...9,460,233 		JBrowse link
G GSX2 GS homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9398437) Ensembl
MGI		 PMID:9398437 GO_REF:0000107 NCBI chr 4:69,837,643...69,840,101
Ensembl chr 4:76,397,180...76,399,715 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11500373) Ensembl
MGI		 PMID:11500373 GO_REF:0000107 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HES3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chr 1:5,008,155...5,012,868
Ensembl chr 1:6,265,738...6,266,937 		JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHB1 EPH receptor B1 ISO RGD PMID:28276447 RGD:127285619 NCBI chr 3:131,841,459...132,309,082
Ensembl chr 3:139,313,387...139,776,802 		JBrowse link
G EPHB2 EPH receptor B2 ISO RGD PMID:28276447 RGD:127285619 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118 		JBrowse link
G PHOX2B paired like homeobox 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21068058) Ensembl
MGI		 PMID:21068058 GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
hypoglossal nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2A paired like homeobox 2A acts_upstream_of_or_within ISO (PMID:21068058)
(PMID:9115735)		 MGI PMID:9115735 PMID:21068058 NCBI chr11:67,317,747...67,322,850 JBrowse link
medullary reticular formation development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
metencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KAT2A lysine acetyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17325035) Ensembl
MGI		 PMID:17325035 GO_REF:0000107 NCBI chr17:15,194,414...15,202,818
Ensembl chr17:15,416,075...15,424,197 		JBrowse link
G OTX1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20816794) Ensembl
MGI		 PMID:20816794 GO_REF:0000107 NCBI chr2A:63,125,700...63,133,702
Ensembl chr2A:64,255,217...64,262,221 		JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:20816794) MGI PMID:20816794 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012 		JBrowse link
G WNT1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2205396) Ensembl
MGI		 PMID:2205396 GO_REF:0000107 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583 		JBrowse link
negative regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:20153830) MGI PMID:20153830 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18573488 RGD:4889489 NCBI chr17:26,546,177...26,572,301
Ensembl chr17:27,050,900...27,092,882 		JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1B2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2438288) Ensembl
ARUK-UCL		 PMID:2438288 GO_REF:0000107 NCBI chr17:7,681,831...7,688,710
Ensembl chr17:7,669,626...7,673,834 		JBrowse link
pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100987427 cytochrome b-c1 complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:128,283,869...128,285,010
Ensembl chr 5:134,442,883...134,444,020 		JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:8313466) MGI PMID:8313466 NCBI chr 9:108,198,350...108,228,887
Ensembl chr 9:137,168,722...137,197,382 		JBrowse link
positive regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGF epidermal growth factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10027293) Ensembl
MGI		 PMID:10027293 GO_REF:0000107 NCBI chr 4:102,410,724...102,509,691
Ensembl chr 4:112,977,565...113,076,460 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:10027293) MGI PMID:10027293 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942 		JBrowse link
G GPR37L1 G protein-coupled receptor 37 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24062445) Ensembl
MGI		 PMID:24062445 GO_REF:0000107 NCBI chr 1:177,720,832...177,731,551
Ensembl chr 1:182,022,600...182,028,623 		JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (PMID:10027293) MGI PMID:10027293 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10027293) Ensembl
MGI		 PMID:10027293 GO_REF:0000107 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEND1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20153830) MGI
TreeGrafter		 PMID:20153830 GO_REF:0000118 NCBI chr11:804,517...807,608
Ensembl chr11:849,678...850,127 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) MGI PMID:10624947 NCBI chr12:129,549,399...129,579,087 JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNA2 catenin alpha 2 involved_in ISO (PMID:12089526), (PMID:12123610) UniProt PMID:12089526 PMID:12123610 NCBI chr2A:79,594,694...80,745,885
Ensembl chr2A:81,303,559...82,307,258 		JBrowse link
G CUL5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr11:102,895,611...102,994,447
Ensembl chr11:106,371,759...106,469,989 		JBrowse link
G DAB1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9338785)
(PMID:24210661)		 Ensembl
MGI		 PMID:9338785 PMID:24210661 GO_REF:0000107 NCBI chr 1:56,279,089...57,529,881
Ensembl chr 1:58,005,136...58,286,708 		JBrowse link
G RBFOX2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22357600) Ensembl
MGI		 PMID:22357600 GO_REF:0000107 NCBI chr22:16,740,707...17,031,415
Ensembl chr22:34,586,044...34,870,257 		JBrowse link
G RERE arginine-glutamic acid dipeptide repeats involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24466353) Ensembl
MGI		 PMID:24466353 GO_REF:0000107 NCBI chr 1:7,111,594...7,576,667
Ensembl chr 1:8,351,367...8,648,973 		JBrowse link
G RNF7 ring finger protein 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr 3:138,772,581...138,780,763
Ensembl chr 3:146,369,779...146,377,233 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) MGI PMID:24210661 NCBI chr17:18,867,241...18,921,792
Ensembl chr17:19,193,860...19,236,427 		JBrowse link
regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SKOR2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO (PMID:21937600) MGI PMID:21937600 NCBI chr18:40,594,124...40,639,720 JBrowse link
retrotrapezoid nucleus neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHOX2B paired like homeobox 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,070,924...36,074,532
Ensembl chr 4:41,919,742...41,922,449 		JBrowse link
rhombomere 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (PMID:16651541) MGI PMID:16651541 NCBI chr2B:123,392,499...123,399,549 JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (PMID:7508007) MGI PMID:7508007 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
rhombomere 3 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9806922) Ensembl
MGI		 PMID:9806922 GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (PMID:7508007) MGI PMID:7508007 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10230789) Ensembl
MGI		 PMID:10230789 GO_REF:0000107 NCBI chr17:8,991,652...8,994,092
Ensembl chr17:9,176,313...9,178,713 		JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7903221) Ensembl
MGI		 PMID:7903221 GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA2 homeobox A2 acts_upstream_of_or_within ISO (PMID:10230789) MGI PMID:10230789 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
rhombomere 4 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:10529420)
(PMID:8102800), (PMID:9806922)		 MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529420) Ensembl
MGI		 PMID:10529420 GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10230789) Ensembl
MGI		 PMID:10230789 GO_REF:0000107 NCBI chr17:8,991,652...8,994,092
Ensembl chr17:9,176,313...9,178,713 		JBrowse link
rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:10529420)
(PMID:8102800), (PMID:9806922)		 MGI PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10529420) Ensembl
MGI		 PMID:10529420 GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7925021) Ensembl
MGI		 PMID:7925021 GO_REF:0000107 NCBI chr20:37,023,988...37,027,446
Ensembl chr20:38,127,722...38,128,693 		JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7903221) Ensembl
MGI		 PMID:7903221 GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
rhombomere 6 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAFB MAF bZIP transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7925021) Ensembl
MGI		 PMID:7925021 GO_REF:0000107 NCBI chr20:37,023,988...37,027,446
Ensembl chr20:38,127,722...38,128,693 		JBrowse link
rhombomere development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21320481) Ensembl
MGI		 PMID:21320481 GO_REF:0000107 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G HOXB3 homeobox B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21320481) Ensembl
MGI		 PMID:21320481 GO_REF:0000107 NCBI chr17:8,946,441...8,987,876
Ensembl chr17:9,147,784...9,171,021 		JBrowse link
rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 ISO RGD PMID:21501682 RGD:8552349 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11517264) Ensembl
MGI		 PMID:11517264 GO_REF:0000107 NCBI chr17:24,285,069...24,289,311
Ensembl chr17:24,577,537...24,579,232 		JBrowse link
G CDK5R2 cyclin dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO (PMID:11517264) MGI PMID:11517264 NCBI chr2B:106,217,926...106,220,444 JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCL1 achaete-scute family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12885554) Ensembl
MGI		 PMID:12885554 GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:8719615) MGI PMID:8719615 NCBI chr19:12,769,586...13,189,022
Ensembl chr19:13,507,102...13,804,729 		JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:20,818,395...20,884,053
Ensembl chr21:34,190,043...34,190,441 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16641
    developmental process 6646
      anatomical structure development 6234
        hindbrain development 223
          cell differentiation in hindbrain + 32
          cell migration in hindbrain + 23
          cell proliferation in hindbrain + 15
          fourth ventricle development 2
          hindbrain maturation + 7
          hindbrain morphogenesis + 62
          medulla oblongata development + 5
          metencephalon development + 170
          rhombomere development + 9
Path 2
Term Annotations click to browse term
  biological_process 16641
    developmental process 6646
      anatomical structure development 6234
        multicellular organism development 5005
          system development 4349
            nervous system development 2725
              central nervous system development 1167
                brain development 879
                  hindbrain development 223
                    cell differentiation in hindbrain + 32
                    cell migration in hindbrain + 23
                    cell proliferation in hindbrain + 15
                    fourth ventricle development 2
                    hindbrain maturation + 7
                    hindbrain morphogenesis + 62
                    medulla oblongata development + 5
                    metencephalon development + 170
                    rhombomere development + 9
paths to the root