AK1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 11 | 11,476,471 - 11,486,406 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 11,478,853 - 11,488,753 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 98,987,348 - 98,997,252 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 127,657,338 - 127,678,245 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 127,657,338 - 127,678,245 (-) | Ensembl | panpan1.1 | | panPan2 | |
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AK1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 9 | 127,866,480 - 127,879,621 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 127,866,486 - 127,877,675 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 130,628,759 - 130,641,900 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 129,668,580 - 129,679,843 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 127,708,222 - 127,719,495 | NCBI | | | | | Celera | 9 | 101,279,601 - 101,290,850 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q34.11 | NCBI | | | | | HuRef | 9 | 100,246,223 - 100,257,472 (-) | NCBI | | HuRef | | | CHM1_1 | 9 | 130,780,691 - 130,791,941 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 140,073,895 - 140,087,021 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ak1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 32,511,770 - 32,525,070 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 32,511,770 - 32,525,070 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 32,621,758 - 32,635,058 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 32,621,758 - 32,635,058 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 32,485,024 - 32,490,572 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 32,451,513 - 32,457,061 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 32,336,146 - 32,341,694 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | B | NCBI | | | | | cM Map | 2 | 22.09 | NCBI | | | | |
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Ak1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 36,310,113 - 36,320,760 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 15,912,431 - 15,923,045 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 15,912,485 - 15,923,041 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 18,984,611 - 18,991,850 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 27,569,617 - 27,576,860 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 25,820,734 - 25,827,945 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 11,652,143 - 11,659,135 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 16,995,977 - 17,002,969 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 19,821,482 - 19,822,544 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 19,741,850 - 19,742,913 (+) | NCBI | | | | | Celera | 3 | 10,656,923 - 10,664,139 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | p11 | NCBI | | | | |
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Ak1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955419 | 799,410 - 811,029 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955419 | 799,415 - 807,138 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AK1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 9 | 55,539,179 - 55,548,132 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 55,539,260 - 55,548,132 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 54,737,172 - 54,742,120 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 56,461,156 - 56,477,699 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 56,461,226 - 56,470,095 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 55,225,113 - 55,230,060 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 55,539,847 - 55,544,794 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 55,631,318 - 55,636,272 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ak1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 195,739,140 - 195,748,925 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936487 | 15,507,498 - 15,517,469 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936487 | 15,507,663 - 15,517,401 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AK1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 268,355,033 - 268,365,598 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 268,355,032 - 268,365,659 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 302,278,352 - 302,287,965 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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AK1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 12 | 10,251,793 - 10,261,635 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 10,256,054 - 10,261,465 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666079 | 5,960,893 - 5,972,066 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ak1 (Heterocephalus glaber - naked mole-rat) |
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