FKTN (fukutin) - Rat Genome Database
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Gene: FKTN (fukutin) Pan paniscus
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Symbol: FKTN
Name: fukutin
RGD ID: 11910191
Description: INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of JNK cascade (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2M (ortholog); cardiomyopathy (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: T-cell acute lymphocytic leukemia protein 2; TAL bHLH transcription factor 2; TAL2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19104,849,447 - 104,926,414 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9104,849,496 - 104,925,422 (+)Ensemblpanpan1.1panPan2
PanPan1.1 Ensembl9104,947,724 - 104,948,050 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0976,723,071 - 76,821,611 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
FKTN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19104,849,447 - 104,926,414 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9104,849,496 - 104,925,422 (+)Ensemblpanpan1.1panPan2
PanPan1.1 Ensembl9104,947,724 - 104,948,050 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0976,723,071 - 76,821,611 (+)NCBIMhudiblu_PPA_v0panPan3
FKTN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9105,558,122 - 105,653,820 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl9105,558,130 - 105,641,118 (+)EnsemblGRCh38hg38GRCh38
GRCh389105,558,117 - 105,655,950 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379108,320,411 - 108,403,399 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369107,360,232 - 107,443,220 (+)NCBINCBI36hg18NCBI36
Build 349105,399,978 - 105,482,953NCBI
Celera978,825,571 - 78,908,566 (+)NCBI
Cytogenetic Map9q31.2NCBI
HuRef977,921,830 - 78,004,880 (+)NCBIHuRef
CHM1_19108,467,406 - 108,550,392 (+)NCBICHM1_1
Fktn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39453,713,745 - 53,765,785 (+)NCBIGRCm39mm39
GRCm39 Ensembl453,713,998 - 53,777,890 (+)Ensembl
GRCm38453,714,107 - 53,765,785 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl453,713,998 - 53,777,890 (+)EnsemblGRCm38mm10GRCm38
MGSCv37453,727,054 - 53,776,143 (+)NCBIGRCm37mm9NCBIm37
MGSCv36453,735,282 - 53,784,371 (+)NCBImm8
Celera453,671,147 - 53,720,238 (+)NCBICelera
Cytogenetic Map4B2NCBI
cM Map428.74NCBI
Fktn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2568,339,803 - 68,396,412 (+)NCBI
Rnor_6.0 Ensembl570,528,688 - 70,578,273 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0570,522,001 - 70,578,270 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0574,697,518 - 74,754,106 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4571,155,051 - 71,208,525 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1571,168,040 - 71,211,945 (+)NCBI
Celera567,234,078 - 67,287,987 (+)NCBICelera
Cytogenetic Map5q24NCBI
Fktn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541920,933,662 - 20,994,793 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541920,933,662 - 20,994,793 (-)NCBIChiLan1.0ChiLan1.0
FKTN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1161,405,034 - 61,461,396 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11161,394,002 - 61,462,056 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Fktn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365596,612,318 - 6,680,690 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FKTN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11246,852,387 - 246,916,650 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21276,542,569 - 276,576,326 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FKTN
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11233,872,165 - 33,964,105 (-)NCBI
ChlSab1.1 Ensembl1233,900,362 - 33,953,377 (-)Ensembl
Fktn
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247585,750,804 - 5,877,797 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000005146   ⟹   ENSPPAP00000001099
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9104,947,724 - 104,948,050 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000031419   ⟹   ENSPPAP00000008780
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9104,849,496 - 104,920,594 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000031423   ⟹   ENSPPAP00000008784
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9104,866,352 - 104,925,422 (+)Ensembl
RefSeq Acc Id: XM_014346223   ⟹   XP_014201709
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.19104,849,463 - 104,926,414 (+)NCBI
Mhudiblu_PPA_v0976,723,071 - 76,821,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024930165   ⟹   XP_024785933
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.19104,881,869 - 104,925,350 (+)NCBI
Mhudiblu_PPA_v0976,755,551 - 76,798,593 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034967923   ⟹   XP_034823814
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v0976,723,071 - 76,800,041 (+)NCBI
Protein Sequences
Protein RefSeqs XP_014201709 (Get FASTA)   NCBI Sequence Viewer  
  XP_024785933 (Get FASTA)   NCBI Sequence Viewer  
  XP_034823814 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_014201709   ⟸   XM_014346223
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024785933   ⟸   XM_024930165
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034823814   ⟸   XM_034967923
- Peptide Label: isoform X3
RefSeq Acc Id: ENSPPAP00000001099   ⟸   ENSPPAT00000005146
RefSeq Acc Id: ENSPPAP00000008784   ⟸   ENSPPAT00000031423
RefSeq Acc Id: ENSPPAP00000008780   ⟸   ENSPPAT00000031419
Protein Domains
bHLH


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000004739 Ensembl, UniProtKB/TrEMBL
  ENSPPAG00000027627 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000001099 UniProtKB/TrEMBL
  ENSPPAP00000008780 UniProtKB/TrEMBL
  ENSPPAP00000008784 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000005146 UniProtKB/TrEMBL
  ENSPPAT00000031419 UniProtKB/TrEMBL
  ENSPPAT00000031423 UniProtKB/TrEMBL
Gene3D-CATH 4.10.280.10 UniProtKB/TrEMBL
InterPro bHLH_dom UniProtKB/TrEMBL
  Fukutin-related UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/TrEMBL
  LicD_fam UniProtKB/TrEMBL
  TAL-like UniProtKB/TrEMBL
KEGG Report pps:100969581 UniProtKB/TrEMBL
  pps:100969928 UniProtKB/TrEMBL
NCBI Gene FKTN ENTREZGENE
PANTHER PTHR13864 UniProtKB/TrEMBL
  PTHR15407 UniProtKB/TrEMBL
Pfam HLH UniProtKB/TrEMBL
  LicD UniProtKB/TrEMBL
PROSITE BHLH UniProtKB/TrEMBL
SMART HLH UniProtKB/TrEMBL
Superfamily-SCOP SSF47459 UniProtKB/TrEMBL
UniProt A0A2R8Z8D5_PANPA UniProtKB/TrEMBL
  A0A2R8ZUZ2_PANPA UniProtKB/TrEMBL
  A0A2R8ZUZ3_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-11 FKTN  fukutin  TAL2  TAL bHLH transcription factor 2  Data Merged 737654 PROVISIONAL