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ONTOLOGY REPORT - ANNOTATIONS


Term:rhombomere 5 development
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Accession:GO:0021571 term browser browse the term
Definition:The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.


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rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (MGI:1306866|PMID:9806922), (MGI:62658|PMID:8102800)
(MGI:1346308|PMID:10529420)
MGI PMID:8102800 PMID:9806922 PMID:10529420 MGI:1306866 MGI:1346308 MGI:62658 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747
JBrowse link
G HOXB1 homeobox B1 acts_upstream_of_or_within ISO (MGI:1346308|PMID:10529420) MGI PMID:10529420 MGI:1346308 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696
JBrowse link
G MAFB MAF bZIP transcription factor B acts_upstream_of_or_within ISO (MGI:67780|PMID:7925021) MGI PMID:7925021 MGI:67780 NCBI chr20:37,023,988...37,027,446
Ensembl chr20:38,127,722...38,128,693
JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 acts_upstream_of_or_within ISO (MGI:64171|PMID:7903221) MGI PMID:7903221 MGI:64171 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846
JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR2 early growth response 2 involved_in ISO (MGI:52248|PMID:8093858)
(MGI:6393337|PMID:11823429)
UniProt PMID:8093858 PMID:11823429 MGI:52248 MGI:6393337 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12650
    developmental process 5901
      anatomical structure development 5504
        rhombomere development 9
          rhombomere 5 development 4
            rhombomere 5 morphogenesis + 1
Path 2
Term Annotations click to browse term
  biological_process 12650
    developmental process 5901
      anatomical structure development 5504
        multicellular organism development 5032
          system development 4738
            nervous system development 2434
              central nervous system development 1176
                brain development 932
                  hindbrain development 216
                    rhombomere development 9
                      rhombomere 5 development 4
                        rhombomere 5 morphogenesis + 1
paths to the root