BMP7 (bone morphogenetic protein 7) - Rat Genome Database

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Pathways
Gene: BMP7 (bone morphogenetic protein 7) Pan paniscus
Analyze
Symbol: BMP7
Name: bone morphogenetic protein 7 (Ensembl:bone morphotic protein 7)
RGD ID: 11830836
Description: ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN kidney development (ortholog); osteoblast differentiation (ortholog); regulation of phosphorylation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Acute Otitis Media (ortholog); atrial heart septal defect 8 (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); vesicle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22162,920,305 - 63,017,237 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12062,913,422 - 63,010,356 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02053,509,484 - 53,606,889 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12054,788,974 - 54,885,015 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2054,788,974 - 54,885,021 (-)EnsemblpanPan2panpan1.1
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
allantois development  (IEA)
ameloblast differentiation  (IEA)
anatomical structure formation involved in morphogenesis  (IEA)
animal organ morphogenesis  (IEA)
axon guidance  (IEA)
BMP signaling pathway  (IEA)
branching involved in salivary gland morphogenesis  (IEA)
branching morphogenesis of an epithelial tube  (IEA)
camera-type eye morphogenesis  (IEA)
cardiac muscle tissue development  (IEA)
cardiac septum morphogenesis  (IEA)
cartilage development  (IEA)
cell development  (IEA)
cell differentiation  (IEA)
cell population proliferation  (IEA)
cell-cell adhesion  (IEA)
cellular response to BMP stimulus  (IEA)
chorio-allantoic fusion  (IEA)
embryonic camera-type eye morphogenesis  (IEA)
embryonic limb morphogenesis  (IEA)
embryonic pattern specification  (IEA)
embryonic skeletal joint morphogenesis  (IEA)
endocardial cushion formation  (IEA)
epithelial cell differentiation  (IEA)
eye development  (IEA)
heart trabecula morphogenesis  (IEA)
hindbrain development  (IEA)
kidney development  (IEA,ISO)
mesenchymal cell apoptotic process involved in nephron morphogenesis  (IEA)
mesenchymal cell differentiation  (IEA)
mesenchyme development  (IEA)
mesoderm formation  (IEA)
mesonephros development  (IEA)
metanephric mesenchymal cell proliferation involved in metanephros development  (IEA)
metanephric mesenchyme morphogenesis  (IEA)
metanephros development  (IEA)
monocyte aggregation  (IEA)
negative regulation of cell cycle  (IEA)
negative regulation of cell population proliferation  (IEA)
negative regulation of DNA-templated transcription  (IEA)
negative regulation of glomerular mesangial cell proliferation  (IEA)
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis  (IEA)
negative regulation of mitotic nuclear division  (IEA)
negative regulation of neurogenesis  (IEA)
negative regulation of neuron differentiation  (IEA)
negative regulation of Notch signaling pathway  (IEA)
negative regulation of prostatic bud formation  (IEA)
nephrogenic mesenchyme morphogenesis  (IEA)
neural fold elevation formation  (IEA)
neuron projection morphogenesis  (IEA)
odontogenesis of dentin-containing tooth  (IEA)
ossification  (IEA)
osteoblast differentiation  (IEA,ISO)
pattern specification process  (IEA)
pericardium morphogenesis  (IEA)
pharyngeal system development  (IEA)
positive regulation of apoptotic process  (IEA)
positive regulation of bone mineralization  (IEA)
positive regulation of brown fat cell differentiation  (IEA)
positive regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis  (IEA)
positive regulation of cell differentiation  (IEA)
positive regulation of dendrite development  (IEA)
positive regulation of DNA-templated transcription  (IEA)
positive regulation of epithelial cell differentiation  (IEA)
positive regulation of epithelial to mesenchymal transition  (IEA)
positive regulation of gene expression  (IEA)
positive regulation of heterotypic cell-cell adhesion  (IEA)
positive regulation of hyaluranon cable assembly  (IEA)
positive regulation of multicellular organismal process  (IEA)
positive regulation of neuron differentiation  (IEA)
positive regulation of osteoblast differentiation  (IEA)
positive regulation of SMAD protein signal transduction  (IEA)
positive regulation of transcription by RNA polymerase II  (IEA)
regulation of branching involved in prostate gland morphogenesis  (IEA)
regulation of multicellular organismal development  (IEA)
regulation of phosphorylation  (ISO)
response to estradiol  (ISO)
response to peptide hormone  (ISO)
response to vitamin D  (ISO)
salivary gland morphogenesis  (IEA)
skeletal system development  (IEA)
tube morphogenesis  (IEA)
ureteric bud development  (IEA)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
BMP7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22162,920,305 - 63,017,237 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12062,913,422 - 63,010,356 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02053,509,484 - 53,606,889 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12054,788,974 - 54,885,015 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2054,788,974 - 54,885,021 (-)EnsemblpanPan2panpan1.1
BMP7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382057,168,753 - 57,266,641 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2057,168,753 - 57,266,641 (-)Ensemblhg38GRCh38
GRCh372055,743,809 - 55,841,697 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362055,178,962 - 55,274,708 (-)NCBIBuild 36Build 36hg18NCBI36
Build 342055,178,961 - 55,274,708NCBI
Celera2052,484,025 - 52,581,945 (-)NCBICelera
Cytogenetic Map20q13.31NCBI
HuRef2052,525,580 - 52,623,004 (-)NCBIHuRef
CHM1_12055,645,001 - 55,742,816 (-)NCBICHM1_1
T2T-CHM13v2.02058,946,552 - 59,044,382 (-)NCBIT2T-CHM13v2.0
Bmp7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392172,709,805 - 172,782,114 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2172,709,805 - 172,782,114 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm382172,868,012 - 172,940,321 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2172,868,012 - 172,940,321 (-)Ensemblmm10GRCm38
MGSCv372172,695,187 - 172,765,794 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362172,512,625 - 172,583,232 (-)NCBIMGSCv36mm8
Celera2178,834,089 - 178,904,564 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map295.54NCBI
Bmp7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83182,059,318 - 182,135,273 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3182,052,337 - 182,135,137 (-)EnsemblGRCr8
mRatBN7.23161,639,915 - 161,716,938 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3161,516,462 - 161,716,788 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3165,452,682 - 165,528,533 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03173,951,623 - 174,027,477 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03171,693,437 - 171,769,286 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03170,879,972 - 170,955,820 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3170,879,973 - 170,955,399 (-)Ensemblrn6Rnor6.0
Rnor_5.03176,945,362 - 177,020,745 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43163,723,429 - 163,799,567 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3160,834,683 - 160,910,334 (-)NCBICelera
RGSC_v3.13163,630,250 - 163,704,848 (-)NCBI
Cytogenetic Map3q42NCBI
Bmp7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554452,153,170 - 2,235,795 (+)Ensembl
ChiLan1.0NW_0049554452,154,057 - 2,235,594 (+)NCBIChiLan1.0ChiLan1.0
BMP7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12442,203,183 - 42,294,105 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2442,204,823 - 42,294,653 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2441,452,207 - 41,541,996 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02443,068,237 - 43,159,868 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2443,069,877 - 43,159,842 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12442,155,146 - 42,244,886 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02442,294,769 - 42,384,624 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02442,952,879 - 43,042,732 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Bmp7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640183,162,668 - 183,234,253 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493653071,920 - 143,940 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493653071,965 - 143,940 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BMP7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1757,584,956 - 57,675,986 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11757,567,770 - 57,676,516 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21764,737,755 - 64,840,710 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BMP7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.126,856,396 - 6,954,948 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl26,856,453 - 6,954,944 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605054,918,476 - 55,017,287 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bmp7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474123,658,004 - 23,737,742 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474123,658,214 - 23,743,227 (-)NCBIHetGla 1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003806158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000041671   ⟹   ENSPPAP00000018925
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2054,788,974 - 54,885,021 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000041679   ⟹   ENSPPAP00000018932
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2054,791,175 - 54,885,006 (-)Ensembl
RefSeq Acc Id: XM_003806158   ⟹   XP_003806206
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22162,920,305 - 63,017,237 (-)NCBI
NHGRI_mPanPan12062,913,422 - 63,010,356 (-)NCBI
Mhudiblu_PPA_v02053,509,484 - 53,606,889 (-)NCBI
PanPan1.12054,788,974 - 54,885,015 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003806206 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000018925.1
  ENSPPAP00000018932.1
  ENSPPAP00050014775
RefSeq Acc Id: XP_003806206   ⟸   XM_003806158
- UniProtKB: A0A2R9AT21 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000018932   ⟸   ENSPPAT00000041679
Ensembl Acc Id: ENSPPAP00000018925   ⟸   ENSPPAT00000041671
Protein Domains
TGF-beta family profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000032623 Ensembl, UniProtKB/TrEMBL
  ENSPPAG00050011278 ENTREZGENE
Ensembl Transcript ENSPPAT00000041671.1 UniProtKB/TrEMBL
  ENSPPAT00000041679.1 UniProtKB/TrEMBL
  ENSPPAT00050023642 ENTREZGENE
Gene3D-CATH 2.10.90.10 UniProtKB/TrEMBL
  2.60.120.970 UniProtKB/TrEMBL
InterPro Cystine-knot_cytokine UniProtKB/TrEMBL
  TGF-b_C UniProtKB/TrEMBL
  TGF-b_propeptide UniProtKB/TrEMBL
  TGF-beta-rel UniProtKB/TrEMBL
  TGFb_CS UniProtKB/TrEMBL
KEGG Report pps:100979629 UniProtKB/TrEMBL
NCBI Gene BMP7 ENTREZGENE
PANTHER BONE MORPHOGENETIC PROTEIN 7 UniProtKB/TrEMBL
  PTHR11848 UniProtKB/TrEMBL
Pfam TGF_beta UniProtKB/TrEMBL
  TGFb_propeptide UniProtKB/TrEMBL
PRINTS INHIBINA UniProtKB/TrEMBL
PROSITE TGF_BETA_1 UniProtKB/TrEMBL
  TGF_BETA_2 UniProtKB/TrEMBL
SMART TGFB UniProtKB/TrEMBL
Superfamily-SCOP SSF57501 UniProtKB/TrEMBL
UniProt A0A2R9ANI4_PANPA UniProtKB/TrEMBL
  A0A2R9AT21 ENTREZGENE, UniProtKB/TrEMBL