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ONTOLOGY REPORT - ANNOTATIONS


Term:GDP binding
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Accession:GO:0019003 term browser browse the term
Definition:Binding to GDP, guanosine 5'-diphosphate.



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GDP binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IDA RGD PMID:7552752 RGD:9684957 NCBI chr10:43,997,983...44,014,543
Ensembl chr10:43,997,986...44,014,434
JBrowse link
G Arf6 ADP-ribosylation factor 6 enables ISO (PMID:15126638) RGD PMID:15126638 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Arl2 ADP-ribosylation factor like GTPase 2 enables IEA
ISO
GO_REF:0000107
(MGI:3584319|PMID:15979089)
Ensembl
RGD
PMID:15979089 GO_REF:0000107 MGI:3584319 NCBI chr 1:203,434,129...203,446,156
Ensembl chr 1:203,434,129...203,446,119
JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 enables IDA
ISO
IEA
(MGI:3584319|PMID:15979089)
(PMID:18588884)
GO_REF:0000107
RGD
Ensembl
PMID:15979089 PMID:18588884 PMID:8034651 GO_REF:0000107 MGI:3584319, RGD:68742 NCBI chr 1:245,400,659...245,446,673
Ensembl chr 1:245,400,550...245,446,820
JBrowse link
G Arl8b ADP-ribosylation factor like GTPase 8B enables ISO (PMID:15331635), (PMID:16650381) RGD PMID:15331635 PMID:16650381 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
G Diras1 DIRAS family GTPase 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,687,964...8,692,828
Ensembl chr 7:8,687,942...8,693,831
JBrowse link
G Diras2 DIRAS family GTPase 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:12,730,040...12,761,511
Ensembl chr17:12,725,149...12,761,663
JBrowse link
G Diras3 DIRAS family GTPase 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:130,524,972...130,527,690
Ensembl chr 6:130,524,742...130,530,825
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 enables ISO
IEA
(PMID:25272277)
GO_REF:0000107
RGD
Ensembl
PMID:25272277 GO_REF:0000107 NCBI chr 8:114,376,649...114,410,297
Ensembl chr 8:114,376,662...114,410,934
JBrowse link
G Eif2b1 eukaryotic translation initiation factor 2B subunit alpha IDA RGD PMID:3818593 RGD:1581069 NCBI chr12:32,025,593...32,033,848
Ensembl chr12:32,025,557...32,046,601
JBrowse link
G Eras ES cell expressed Ras enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:14,573,987...14,578,455
Ensembl chr  X:14,573,987...14,578,374
JBrowse link
G Gbp1 guanylate binding protein 1 enables ISO (PMID:10676968) RGD PMID:10676968 NCBI chr 2:231,398,136...231,432,773
Ensembl chr 2:231,398,163...231,432,131
JBrowse link
G Gem GTP binding protein overexpressed in skeletal muscle enables ISO (PMID:17052716), (PMID:17107948) RGD PMID:17052716 PMID:17107948 NCBI chr 5:25,214,309...25,225,222
Ensembl chr 5:25,214,309...25,225,222
JBrowse link
G Gnai1 G protein subunit alpha i1 enables IDA
IMP
PMID:19703466
PMID:8939752
PMID:8073283
RGD
UniProt
CAFA
PMID:9108480 PMID:19703466 PMID:8939752 PMID:8073283 RGD:7207370, RGD:10449520, RGD:12792995, RGD:12792992 NCBI chr 4:16,813,941...16,898,111
Ensembl chr 4:16,814,001...16,896,417
JBrowse link
G Gnai3 G protein subunit alpha i3 enables ISO
ISS
(PMID:19478087)
GO_REF:0000024
RGD
UniProt
PMID:19478087 GO_REF:0000024 NCBI chr 2:195,742,765...195,780,720
Ensembl chr 2:195,742,642...195,780,742
JBrowse link
G Gnao1 G protein subunit alpha o1 TAS RGD PMID:2820999 RGD:632848 NCBI chr19:11,034,874...11,192,502
Ensembl chr19:11,035,956...11,192,493
JBrowse link
G Hras HRas proto-oncogene, GTPase enables ISO
IBA
(PMID:8142349), (PMID:9230043)
PMID:21873635
RGD PMID:8142349 PMID:9230043 PMID:21873635 RGD:13792537 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Kras KRAS proto-oncogene, GTPase enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12594205 PMID:21873635 RGD:1581766, RGD:13792537 NCBI chr 4:178,185,418...178,218,484 JBrowse link
G Mief1 mitochondrial elongation factor 1 enables ISO (PMID:24515348) RGD PMID:24515348 NCBI chr 7:111,786,630...111,802,220
Ensembl chr 7:111,786,709...111,802,220
JBrowse link
G Mras muscle RAS oncogene homolog enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:99,944,036...100,006,771
Ensembl chr 8:99,944,036...99,996,408
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 enables ISO (PMID:19435876) RGD PMID:19435876 NCBI chr10:78,898,097...78,903,600
Ensembl chr10:78,897,770...78,903,538
JBrowse link
G Nras NRAS proto-oncogene, GTPase enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:190,582,885...190,593,509
Ensembl chr 2:190,582,918...190,591,626
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 IDA RGD PMID:16125296 RGD:1601233 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 IDA RGD PMID:9748490 PMID:9348095 PMID:1651917 RGD:1599724, RGD:2291928, RGD:2291920 NCBI chr  X:104,132,139...104,154,191
Ensembl chr  X:104,132,141...104,154,187
JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 IDA RGD PMID:9748490 PMID:9348095 PMID:1651917 RGD:1599724, RGD:2291928, RGD:2291920 NCBI chr  X:26,975,915...27,013,184
Ensembl chr  X:26,976,061...27,013,181
JBrowse link
G Rab10 RAB10, member RAS oncogene family enables ISO
IEA
ISS
(PMID:20937701)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20937701 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Rab11b RAB11B, member RAS oncogene family enables ISO
ISS
(PMID:16545962)
GO_REF:0000024
RGD
UniProt
PMID:16545962 GO_REF:0000024 NCBI chr 7:14,521,448...14,534,589
Ensembl chr 7:14,521,368...14,534,593
JBrowse link
G Rab12 RAB12, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G Rab14 RAB14, member RAS oncogene family enables ISO
IEA
ISS
(PMID:16034420)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16034420 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,501,953...18,523,253
Ensembl chr 3:18,501,963...18,523,172
JBrowse link
G Rab17 RAB17, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr 9:91,552,924...91,566,759
Ensembl chr 9:91,553,464...91,566,451
JBrowse link
G Rab18 RAB18, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr17:54,944,099...54,976,093
Ensembl chr17:54,943,955...54,976,043
JBrowse link
G Rab21 RAB21, member RAS oncogene family enables ISS
ISO
GO_REF:0000024
(PMID:16034420), (PMID:20937701)
UniProt
RGD
PMID:16034420 PMID:20937701 GO_REF:0000024 NCBI chr 7:50,904,050...50,928,890
Ensembl chr 7:50,904,057...50,928,839
JBrowse link
G Rab22a RAB22A, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr 3:162,459,542...162,506,137
Ensembl chr 3:162,459,726...162,506,137
JBrowse link
G Rab27a RAB27A, member RAS oncogene family enables ISS
ISO
GO_REF:0000024
(PMID:20937701)
UniProt
RGD
PMID:20937701 GO_REF:0000024 NCBI chr 8:73,782,730...73,836,630
Ensembl chr 8:73,782,694...73,847,829
JBrowse link
G Rab27b RAB27B, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr18:63,597,554...63,794,124
Ensembl chr18:63,600,937...63,757,180
JBrowse link
G Rab28 RAB28, member RAS oncogene family enables ISO
ISS
(PMID:19026641), (PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:19026641 PMID:20937701 GO_REF:0000024 NCBI chr14:69,245,846...69,322,968
Ensembl chr14:69,245,854...69,322,967
JBrowse link
G Rab29 RAB29, member RAS oncogene family enables IDA
ISO
(PMID:24510904) RGD PMID:24510904 PMID:9177482 RGD:633763 NCBI chr13:43,307,757...43,313,420
Ensembl chr13:43,307,775...43,313,417
JBrowse link
G Rab2a RAB2A, member RAS oncogene family enables ISO
ISS
IEA
(PMID:16034420)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16034420 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:21,676,219...21,738,833
Ensembl chr 5:21,676,129...21,739,899
JBrowse link
G Rab31 RAB31, member RAS oncogene family enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17189207)
UniProt
Ensembl
RGD
PMID:17189207 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:105,246,712...105,382,973
Ensembl chr 9:105,246,709...105,381,253
JBrowse link
G Rab35 RAB35, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr12:40,967,102...40,981,183
Ensembl chr12:40,967,103...40,991,195
JBrowse link
G Rab38 RAB38, member RAS oncogene family IC RGD PMID:15843158 RGD:1599671 NCBI chr 1:142,182,566...142,262,923
Ensembl chr 1:142,182,556...142,262,924
JBrowse link
G Rab3b RAB3B, member RAS oncogene family enables ISO (PMID:22321395) RGD PMID:22321395 NCBI chr 5:123,629,562...123,697,410
Ensembl chr 5:123,644,423...123,697,401
JBrowse link
G Rab40c Rab40c, member RAS oncogene family IDA RGD PMID:15160388 RGD:1302495 NCBI chr10:14,900,926...14,936,165
Ensembl chr10:14,900,929...14,936,557
JBrowse link
G Rab4a RAB4A, member RAS oncogene family enables ISO
ISS
(PMID:15907487), (PMID:16034420)
GO_REF:0000024
RGD
UniProt
PMID:15907487 PMID:16034420 GO_REF:0000024 NCBI chr19:51,795,613...51,822,706
Ensembl chr19:51,795,613...51,822,703
JBrowse link
G Rab5a RAB5A, member RAS oncogene family enables ISO (PMID:15378032), (PMID:23382462) RGD PMID:15378032 PMID:23382462 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
G Rab5b RAB5B, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr 7:1,109,449...1,128,348
Ensembl chr 7:1,109,454...1,128,268
JBrowse link
G Rab5c RAB5C, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr10:85,642,553...85,666,142
Ensembl chr10:85,642,809...85,666,103
JBrowse link
G Rab7a RAB7A, member RAS oncogene family enables IDA
ISO
(PMID:18272684) RGD PMID:18272684 PMID:16040606 RGD:4892340 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Rab8a RAB8A, member RAS oncogene family enables ISO
IEA
ISS
(PMID:20937701)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20937701 GO_REF:0000024 GO_REF:0000107 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Rab8b RAB8B, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr 8:67,458,921...67,536,466
Ensembl chr 8:67,458,923...67,536,384
JBrowse link
G Rab9a RAB9A, member RAS oncogene family enables ISO
ISS
(PMID:15263003), (PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:15263003 PMID:20937701 GO_REF:0000024 NCBI chr  X:27,955,552...28,009,870
Ensembl chr  X:27,952,204...28,001,622
JBrowse link
G Rab9b RAB9B, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr  X:100,220,897...100,231,591
Ensembl chr  X:100,220,894...100,231,701
JBrowse link
G Rala RAS like proto-oncogene A enables ISO
IBA
(PMID:24056301)
PMID:21873635
RGD PMID:24056301 PMID:21873635 RGD:13792537 NCBI chr17:47,092,139...47,145,192
Ensembl chr17:47,092,207...47,144,063
JBrowse link
G Ralb RAS like proto-oncogene B enables ISO
IBA
IEA
(PMID:24056301)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:24056301 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202
JBrowse link
G Ran RAN, member RAS oncogene family enables IDA
ISO
(PMID:11336674), (PMID:18938132), (PMID:27541860) RGD PMID:11336674 PMID:18938132 PMID:27541860 PMID:19505478 RGD:4145659 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:18309292)
UniProt
RGD
PMID:18309292 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:53,423,039...53,456,388
Ensembl chr 7:53,423,130...53,456,370
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family enables ISO
IBA
(PMID:9312017)
PMID:21873635
RGD PMID:9312017 PMID:21873635 RGD:13792537 NCBI chr15:97,596,848...97,597,338
Ensembl chr15:97,596,020...97,624,138
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family enables IBA
ISO
PMID:21873635
(PMID:16213650)
RGD PMID:16213650 PMID:21873635 RGD:13792537 NCBI chr 2:145,599,714...145,600,265
Ensembl chr 2:145,599,116...145,603,069
JBrowse link
G Rap2c RAP2C, member of RAS oncogene family enables IBA
ISO
PMID:21873635
(PMID:16213650)
RGD PMID:16213650 PMID:21873635 RGD:13792537 NCBI chr  X:130,504,554...130,517,671
Ensembl chr  X:130,504,698...130,518,328
JBrowse link
G Rasef RAS and EF hand domain containing enables ISO
IBA
(PMID:17448446)
PMID:21873635
RGD PMID:17448446 PMID:21873635 RGD:13792537 NCBI chr 5:87,548,908...87,619,286
Ensembl chr 5:87,548,908...87,619,031
JBrowse link
G Rasl12 RAS-like, family 12 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:65,917,840...65,931,885
Ensembl chr 8:65,917,840...65,932,741
JBrowse link
G Rerg RAS-like, estrogen-regulated, growth-inhibitor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:169,981,634...170,089,777
Ensembl chr 4:169,982,279...170,089,715
JBrowse link
G Rheb Ras homolog, mTORC1 binding enables IDA
IBA
ISO
IEA
PMID:21873635
(PMID:15728574)
GO_REF:0000107
RGD
Ensembl
PMID:15728574 PMID:16354680 PMID:21873635 GO_REF:0000107, RGD:1625606, RGD:13792537 NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
JBrowse link
G Rhebl1 RHEB like 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:130,026,309...130,031,127
Ensembl chr 7:130,026,341...130,030,248
JBrowse link
G Rhoa ras homolog family member A IDA RGD PMID:20472934 RGD:7242691 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rhob ras homolog family member B enables ISO (MGI:84225|PMID:8939998) RGD PMID:8939998 MGI:84225 NCBI chr 6:31,363,752...31,365,926
Ensembl chr 6:31,363,548...31,366,108
JBrowse link
G Rit1 Ras-like without CAAX 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:174,180,742...174,195,455
Ensembl chr 2:174,180,848...174,195,455
JBrowse link
G Rit2 Ras-like without CAAX 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:22,565,403...22,921,648
Ensembl chr18:22,565,404...22,921,648
JBrowse link
G Rragc Ras-related GTP binding C enables ISO (PMID:11073942), (PMID:22424946) RGD PMID:11073942 PMID:22424946 NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767
JBrowse link
G Rragd Ras-related GTP binding D enables ISO (PMID:22424946) RGD PMID:22424946 NCBI chr 5:47,373,902...47,409,369
Ensembl chr 5:47,373,463...47,409,356
JBrowse link
G Rras RAS related enables IBA
ISO
PMID:21873635
(PMID:16773572), (PMID:24705357)
RGD PMID:16773572 PMID:24705357 PMID:21873635 RGD:13792537 NCBI chr 1:95,500,582...95,504,362
Ensembl chr 1:95,500,566...95,504,357
JBrowse link
G Rras2 RAS related 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:168,233,693...168,303,111
Ensembl chr 1:168,233,693...168,303,111
JBrowse link
G Septin5 septin 5 enables IDA PMID:17685441 UniProt PMID:17685441 RGD:8553835 NCBI chr11:82,373,601...82,379,393
Ensembl chr11:82,369,754...82,379,393
JBrowse link
G Srp54a signal recognition particle 54A enables ISO (PMID:8622769) RGD PMID:8622769 NCBI chr 6:72,587,582...72,645,154
Ensembl chr 6:72,587,605...72,625,189
JBrowse link
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha IDA RGD PMID:7430155 RGD:2306879 NCBI chr 4:105,308,236...105,337,595
Ensembl chr 4:105,308,039...105,337,600
JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta IDA RGD PMID:7430155 RGD:2306879 NCBI chr 4:128,067,031...128,337,146
Ensembl chr 4:128,067,033...128,337,170
JBrowse link
G Trim23 tripartite motif-containing 23 enables IEA
ISO
ISS
GO_REF:0000107
(PMID:8700863)
GO_REF:0000024
Ensembl
RGD
HGNC-UCL
PMID:8700863 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:35,302,405...35,335,746
Ensembl chr 2:35,302,409...35,335,743
JBrowse link
G Ucp1 uncoupling protein 1 enables IDA PMID:22952235 UniProt PMID:22952235 RGD:11541104 NCBI chr19:24,808,782...24,816,853
Ensembl chr19:24,808,783...24,816,852
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20203
    binding 17217
      ion binding 5362
        anion binding 2390
          GDP binding 79
Path 2
Term Annotations click to browse term
  molecular_function 20203
    binding 17217
      heterocyclic compound binding 5751
        nucleoside phosphate binding 2151
          nucleotide binding 2151
            purine nucleotide binding 1874
              purine ribonucleotide binding 1859
                guanyl ribonucleotide binding 402
                  GDP binding 79
paths to the root