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ONTOLOGY REPORT - ANNOTATIONS


Term:GDP binding
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Accession:GO:0019003 term browser browse the term
Definition:Interacting selectively and non-covalently with GDP, guanosine 5'-diphosphate.


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GDP binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IDA RGD PMID:7552752 RGD:9684957 NCBI chr10:45,562,700...45,579,214
Ensembl chr10:45,563,547...45,579,029
JBrowse link
G Arf6 ADP-ribosylation factor 6 enables ISO (PMID:15126638) RGD PMID:15126638 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Arl2 ADP-ribosylation factor like GTPase 2 enables IEA
ISO
GO_REF:0000107
(MGI:3584319|PMID:15979089)
Ensembl
RGD
PMID:15979089 GO_REF:0000107 MGI:3584319 NCBI chr 1:221,504,150...221,516,191
Ensembl chr 1:221,504,170...221,516,110
JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 enables IDA
ISO
IEA
(MGI:3584319|PMID:15979089)
(PMID:18588884)
GO_REF:0000107
RGD
Ensembl
PMID:15979089 PMID:18588884, PMID:8034651 GO_REF:0000107 MGI:3584319, RGD:68742 NCBI chr 1:266,287,015...266,333,099
Ensembl chr 1:266,287,017...266,333,105
JBrowse link
G Arl8b ADP-ribosylation factor like GTPase 8B enables ISO (PMID:15331635), (PMID:16650381) RGD PMID:15331635 PMID:16650381 NCBI chr 4:140,837,745...140,881,866
Ensembl chr 4:140,837,745...140,881,865
JBrowse link
G Diras1 DIRAS family GTPase 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,556,192...11,561,056
Ensembl chr 7:11,556,192...11,561,056
JBrowse link
G Diras2 DIRAS family GTPase 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:12,738,078...12,766,700
Ensembl chr17:12,762,752...12,763,952
JBrowse link
G Diras3 DIRAS family GTPase 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:135,938,345...135,940,205
Ensembl chr 6:135,938,935...135,939,534
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 enables ISO
IEA
(PMID:25272277)
GO_REF:0000107
RGD
Ensembl
PMID:25272277 GO_REF:0000107 NCBI chr 8:122,743,274...122,776,801
Ensembl chr 8:122,743,189...122,776,806
JBrowse link
G Eif2b1 eukaryotic translation initiation factor 2B subunit alpha IDA RGD PMID:3818593 RGD:1581069 NCBI chr12:37,444,136...37,452,391
Ensembl chr12:37,444,072...37,465,398
JBrowse link
G Eras ES cell expressed Ras enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,318,215...15,322,601
Ensembl chr  X:15,419,028...15,423,414
Ensembl chr  X:15,419,028...15,423,414
JBrowse link
G Gbp1 guanylate binding protein 1 enables ISO (PMID:10676968) RGD PMID:10676968 NCBI chr 2:248,343,334...248,423,402
Ensembl chr 2:248,398,917...248,409,570
JBrowse link
G Gem GTP binding protein overexpressed in skeletal muscle enables ISO (PMID:17052716), (PMID:17107948) RGD PMID:17052716 PMID:17107948 NCBI chr 5:25,339,479...25,353,661
Ensembl chr 5:25,349,928...25,353,661
JBrowse link
G Gnai1 G protein subunit alpha i1 enables IDA
IMP
PMID:19703466
PMID:8939752
PMID:8073283
RGD
UniProt
CAFA
PMID:9108480, PMID:19703466, PMID:8939752, PMID:8073283 RGD:7207370, RGD:10449520, RGD:12792995, RGD:12792992 NCBI chr 4:13,405,136...13,486,866
Ensembl chr 4:13,405,136...13,485,883
JBrowse link
G Gnai3 G protein subunit alpha i3 enables ISO
ISS
(PMID:19478087)
GO_REF:0000024
RGD
UniProt
PMID:19478087 GO_REF:0000024 NCBI chr 2:210,896,779...210,934,733
Ensembl chr 2:210,896,656...210,934,749
JBrowse link
G Gnao1 G protein subunit alpha o1 TAS RGD PMID:2820999 RGD:632848 NCBI chr19:11,513,201...11,669,578
Ensembl chr19:11,513,201...11,669,578
JBrowse link
G Hras HRas proto-oncogene, GTPase enables ISO
IBA
(PMID:8142349), (PMID:9230043)
PMID:21873635
RGD PMID:8142349 PMID:9230043, PMID:21873635 RGD:13792537 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Kras KRAS proto-oncogene, GTPase enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12594205, PMID:21873635 RGD:1581766, RGD:13792537 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Mief1 mitochondrial elongation factor 1 enables ISO (PMID:24515348) RGD PMID:24515348 NCBI chr 7:121,462,962...121,478,545
Ensembl chr 7:121,462,966...121,478,546
JBrowse link
G Mras muscle RAS oncogene homolog enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:107,629,028...107,656,851
Ensembl chr 8:107,629,028...107,681,512
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 enables ISO (PMID:19435876) RGD PMID:19435876 NCBI chr10:81,648,216...81,653,717
Ensembl chr10:81,648,216...81,653,717
JBrowse link
G Nras NRAS proto-oncogene, GTPase enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 IDA RGD PMID:16125296 RGD:1601233 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871
JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 IDA RGD PMID:9748490, PMID:9348095, PMID:1651917 RGD:1599724, RGD:2291928, RGD:2291920 NCBI chr  X:111,798,233...111,820,270
Ensembl chr  X:111,798,233...111,820,266
JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 IDA RGD PMID:9748490, PMID:9348095, PMID:1651917 RGD:1599724, RGD:2291928, RGD:2291920 NCBI chr  X:28,435,275...28,472,882
Ensembl chr  X:28,435,507...28,472,880
JBrowse link
G Rab10 RAB10, member RAS oncogene family enables ISO
IEA
ISS
(PMID:20937701)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20937701 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:27,668,387...27,721,120
Ensembl chr 6:27,668,403...27,721,120
JBrowse link
G Rab11b RAB11B, member RAS oncogene family enables ISO
ISS
(PMID:16545962)
GO_REF:0000024
RGD
UniProt
PMID:16545962 GO_REF:0000024 NCBI chr 7:18,598,991...18,612,132
Ensembl chr 7:18,598,880...18,612,147
JBrowse link
G Rab12 RAB12, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr 9:114,683,985...114,709,613
Ensembl chr 9:114,684,039...114,709,546
JBrowse link
G Rab14 RAB14, member RAS oncogene family enables ISO
IEA
ISS
(PMID:16034420)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16034420 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:14,373,270...14,395,357
Ensembl chr 3:14,373,275...14,395,362
JBrowse link
G Rab17 RAB17, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr 9:98,118,907...98,131,883
Ensembl chr 9:98,118,908...98,131,883
JBrowse link
G Rab18 RAB18, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr17:59,844,781...59,876,170
Ensembl chr17:59,844,781...59,876,164
JBrowse link
G Rab21 RAB21, member RAS oncogene family enables ISS
ISO
GO_REF:0000024
(PMID:16034420), (PMID:20937701)
UniProt
RGD
PMID:16034420 PMID:20937701 GO_REF:0000024 NCBI chr 7:58,261,985...58,286,770
Ensembl chr 7:58,261,992...58,286,770
JBrowse link
G Rab22a RAB22A, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr 3:171,743,884...171,790,558
Ensembl chr 3:171,743,929...171,790,558
JBrowse link
G Rab27a RAB27A, member RAS oncogene family enables ISS
ISO
GO_REF:0000024
(PMID:20937701)
UniProt
RGD
PMID:20937701 GO_REF:0000024 NCBI chr 8:79,722,334...79,776,228
Ensembl chr 8:79,722,334...79,776,221
JBrowse link
G Rab27b RAB27B, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr18:68,486,006...68,644,595
Ensembl chr18:68,488,942...68,551,558
JBrowse link
G Rab28 RAB28, member RAS oncogene family enables ISO
ISS
(PMID:19026641), (PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:19026641 PMID:20937701 GO_REF:0000024 NCBI chr14:73,888,968...73,963,209
Ensembl chr14:73,889,213...73,963,202
JBrowse link
G Rab29 RAB29, member RAS oncogene family enables IDA
ISO
(PMID:24510904) RGD PMID:24510904, PMID:9177482 RGD:633763 NCBI chr13:48,644,575...48,650,229
Ensembl chr13:48,644,604...48,650,220
JBrowse link
G Rab2a RAB2A, member RAS oncogene family enables ISO
ISS
IEA
(PMID:16034420)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16034420 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:21,632,654...21,696,721
Ensembl chr 5:21,632,926...21,695,519
JBrowse link
G Rab31 RAB31, member RAS oncogene family enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17189207)
UniProt
Ensembl
RGD
PMID:17189207 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:113,370,072...113,504,606
Ensembl chr 9:113,370,033...113,504,605
JBrowse link
G Rab35 RAB35, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr12:46,704,274...46,718,404
Ensembl chr12:46,704,275...46,718,355
JBrowse link
G Rab38 RAB38, member RAS oncogene family IC RGD PMID:15843158 RGD:1599671 NCBI chr 1:152,072,716...152,153,449
Ensembl chr 1:152,072,665...152,153,449
JBrowse link
G Rab3b RAB3B, member RAS oncogene family enables ISO (PMID:22321395) RGD PMID:22321395 NCBI chr 5:128,501,789...128,568,170
Ensembl chr 5:128,501,847...128,568,188
JBrowse link
G Rab40c Rab40c, member RAS oncogene family IDA RGD PMID:15160388 RGD:1302495 NCBI chr10:15,247,913...15,283,111
Ensembl chr10:15,247,914...15,282,951
JBrowse link
G Rab4a RAB4A, member RAS oncogene family enables ISO
ISS
(PMID:15907487), (PMID:16034420)
GO_REF:0000024
RGD
UniProt
PMID:15907487 PMID:16034420 GO_REF:0000024 NCBI chr19:56,585,598...56,613,078
Ensembl chr19:56,585,767...56,613,075
JBrowse link
G Rab5a RAB5A, member RAS oncogene family enables ISO (PMID:15378032), (PMID:23382462) RGD PMID:15378032 PMID:23382462 NCBI chr 9:5,910...6,065 JBrowse link
G Rab5b RAB5B, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr 7:3,104,530...3,123,384
Ensembl chr 7:3,104,551...3,123,297
JBrowse link
G Rab5c RAB5C, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr10:88,621,924...88,645,364
Ensembl chr10:88,621,925...88,645,364
JBrowse link
G Rab7a RAB7A, member RAS oncogene family enables IDA
ISO
(PMID:18272684) RGD PMID:18272684, PMID:16040606 RGD:4892340 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Rab8a RAB8A, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr16:19,355,047...19,376,776
Ensembl chr16:19,355,048...19,376,776
JBrowse link
G Rab8b RAB8B, member RAS oncogene family enables ISO
ISS
(PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:20937701 GO_REF:0000024 NCBI chr 8:72,641,680...72,714,646
Ensembl chr 8:72,638,003...72,714,664
JBrowse link
G Rab9a RAB9A, member RAS oncogene family enables ISO
ISS
(PMID:15263003), (PMID:20937701)
GO_REF:0000024
RGD
UniProt
PMID:15263003 PMID:20937701 GO_REF:0000024 NCBI chr  X:29,525,256...29,547,295
Ensembl chr  X:29,525,256...29,547,294
JBrowse link
G Rab9b RAB9B, member RAS oncogene family enables ISO (PMID:20937701) RGD PMID:20937701 NCBI chr  X:107,531,404...107,542,510
Ensembl chr  X:107,531,404...107,542,510
JBrowse link
G Rala RAS like proto-oncogene A enables ISO
IBA
(PMID:24056301)
PMID:21873635
RGD PMID:24056301, PMID:21873635 RGD:13792537 NCBI chr17:49,676,073...49,729,133
Ensembl chr17:49,714,294...49,727,664
JBrowse link
G Ralb RAS like proto-oncogene B enables ISO
IBA
IEA
(PMID:24056301)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:24056301, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:35,494,716...35,531,503
Ensembl chr13:35,494,721...35,511,020
JBrowse link
G Ran RAN, member RAS oncogene family enables IDA
ISO
(PMID:11336674), (PMID:18938132), (PMID:27541860) RGD PMID:11336674 PMID:18938132 PMID:27541860, PMID:19505478 RGD:4145659 NCBI chr12:31,319,556...31,324,105
Ensembl chr12:31,320,624...31,323,810
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:18309292)
UniProt
RGD
PMID:18309292, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:60,850,406...60,878,226
Ensembl chr 7:60,853,930...60,860,990
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family enables ISO
IBA
(PMID:9312017)
PMID:21873635
RGD PMID:9312017, PMID:21873635 RGD:13792537 NCBI chr15:105,851,543...105,852,033
Ensembl chr15:105,851,542...105,878,666
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family enables IBA
ISO
PMID:21873635
(PMID:16213650)
RGD PMID:16213650, PMID:21873635 RGD:13792537 NCBI chr 2:151,685,251...151,685,802
Ensembl chr 2:151,685,251...151,685,802
JBrowse link
G Rap2c RAP2C, member of RAS oncogene family enables IBA
ISO
PMID:21873635
(PMID:16213650)
RGD PMID:16213650, PMID:21873635 RGD:13792537 NCBI chr  X:138,224,039...138,237,157
Ensembl chr  X:138,224,040...138,237,157
JBrowse link
G Rasef RAS and EF hand domain containing enables ISO (PMID:17448446) RGD PMID:17448446 NCBI chr 5:90,419,044...90,488,882
Ensembl chr 5:90,419,020...90,488,896
JBrowse link
G Rasl12 RAS-like, family 12 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:70,915,944...70,931,275
Ensembl chr 8:70,915,953...70,930,179
JBrowse link
G Rerg RAS-like, estrogen-regulated, growth-inhibitor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:171,069,161...171,176,678
Ensembl chr 4:171,069,191...171,176,581
JBrowse link
G Rheb Ras homolog, mTORC1 binding enables IDA
IBA
ISO
IEA
PMID:21873635
(PMID:15728574)
GO_REF:0000107
RGD
Ensembl
PMID:15728574, PMID:16354680, PMID:21873635 GO_REF:0000107, RGD:1625606, RGD:13792537 NCBI chr 4:6,827,429...6,873,384
Ensembl chr 4:6,827,429...6,873,383
JBrowse link
G Rhebl1 RHEB like 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,552,704...140,556,980
Ensembl chr 7:140,552,733...140,556,639
JBrowse link
G Rhoa ras homolog family member A IDA RGD PMID:20472934 RGD:7242691 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rhob ras homolog family member B enables ISO (MGI:84225|PMID:8939998) RGD PMID:8939998 MGI:84225 NCBI chr 6:33,689,127...33,691,301
Ensembl chr 6:33,689,127...33,691,301
JBrowse link
G Rit1 Ras-like without CAAX 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:188,087,486...188,099,444
Ensembl chr 2:188,087,486...188,099,444
JBrowse link
G Rit2 Ras-like without CAAX 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,700,012...24,057,917
Ensembl chr18:23,700,013...24,057,917
JBrowse link
G Rragc Ras-related GTP binding C enables ISO (PMID:11073942), (PMID:22424946) RGD PMID:11073942 PMID:22424946 NCBI chr 5:141,572,536...141,590,784
Ensembl chr 5:141,572,536...141,590,781
JBrowse link
G Rragd Ras-related GTP binding D enables ISO (PMID:22424946) RGD PMID:22424946 NCBI chr 5:48,224,994...48,260,691
Ensembl chr 5:48,224,994...48,260,685
JBrowse link
G Rras RAS related enables IBA
ISO
PMID:21873635
(PMID:16773572), (PMID:24705357)
RGD PMID:16773572 PMID:24705357, PMID:21873635 RGD:13792537 NCBI chr 1:101,012,822...101,016,720
Ensembl chr 1:101,012,822...101,016,720
JBrowse link
G Rras2 RAS related 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:178,940,515...179,010,257
Ensembl chr 1:178,940,516...179,010,257
JBrowse link
G Septin5 septin 5 enables IDA PMID:17685441 UniProt PMID:17685441 RGD:8553835 NCBI chr11:86,516,377...86,522,169
Ensembl chr11:86,512,797...86,522,168
JBrowse link
G Srp54a signal recognition particle 54A enables ISO (PMID:8622769) RGD PMID:8622769 NCBI chr 6:75,996,629...76,035,768
Ensembl chr 6:75,996,643...76,034,083
JBrowse link
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha IDA RGD PMID:7430155 RGD:2306879 NCBI chr 4:101,181,315...101,210,692
Ensembl chr 4:101,180,404...101,210,746
JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta IDA RGD PMID:7430155 RGD:2306879 NCBI chr 4:127,552,100...127,824,970
Ensembl chr 4:127,552,101...127,824,970
JBrowse link
G Trim23 tripartite motif-containing 23 enables IEA
ISO
ISS
GO_REF:0000107
(PMID:8700863)
GO_REF:0000024
Ensembl
RGD
HGNC-UCL
PMID:8700863 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:34,255,300...34,288,140
Ensembl chr 2:34,255,305...34,288,139
JBrowse link
G Ucp1 uncoupling protein 1 enables IDA PMID:22952235 UniProt PMID:22952235 RGD:11541104 NCBI chr19:24,456,976...24,464,808
Ensembl chr19:24,456,976...24,464,807
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20083
    binding 17057
      ion binding 5274
        anion binding 2377
          GDP binding 79
Path 2
Term Annotations click to browse term
  molecular_function 20083
    binding 17057
      heterocyclic compound binding 5675
        nucleoside phosphate binding 2150
          nucleotide binding 2150
            purine nucleotide binding 1871
              purine ribonucleotide binding 1853
                guanyl ribonucleotide binding 399
                  GDP binding 79
paths to the root