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ONTOLOGY REPORT - ANNOTATIONS

Term:glucan biosynthetic process
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Accession:GO:0009250 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.
Synonyms:exact_synonym: glucan anabolism;   glucan biosynthesis;   glucan formation;   glucan synthesis


show annotations for term's descendants           Sort by:
glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO
IEA		 (MGI:4412440|PMID:18459129)
GO_REF:0000107		 RGD
Ensembl		 PMID:18459129 GO_REF:0000107 MGI:4412440 NCBI chr 2:242,858,865...242,883,036
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:204,705,053...204,760,966
Ensembl chr 2:204,705,053...204,760,828 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in IMP
IEA		 PMID:10400692
GO_REF:0000043		 UniProt PMID:10400692 GO_REF:0000043, RGD:8553850 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817 		JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2145264 (PMID:28536304)
MGI:6118039 (PMID:17118331), (PMID:18040046), (PMID:31042462)		 Ensembl
RGD		 PMID:17118331 PMID:18040046 PMID:28536304 PMID:31042462 GO_REF:0000107 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555 		JBrowse link
G Epm2aip1 EPM2A interacting protein 1 acts_upstream_of ISO MGI:3857785 (PMID:24142699) RGD PMID:24142699 NCBI chr 8:111,233,871...111,241,219
Ensembl chr 8:111,233,826...111,241,871 		JBrowse link
G Gbe1 1,4-alpha-glucan branching enzyme 1 involved_in IDA
ISO
IBA		 MGI:4868492|MGI:5293612|MGI:5767122 (PMID:21075835), (PMID:21856731), (PMID:31042462)
GO_REF:0000033
(PMID:26199317)		 RGD
GO_Central		 PMID:21075835 PMID:21856731 PMID:26199317 PMID:31042462 PMID:6449198 GO_REF:0000033, RGD:1642743 NCBI chr11:8,734,806...9,000,226
Ensembl chr11:8,734,820...9,000,210 		JBrowse link
G Gck glucokinase IDA RGD PMID:17028192 RGD:1581879 NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995 		JBrowse link
G Gyg1 glycogenin 1 involved_in IDA
ISO
IBA
IEA		 MGI:4364071 (PMID:33219378)
GO_REF:0000033
GO_REF:0000117
GO_REF:0000041
(PMID:22160680)		 RGD
GO_Central
UniProt		 PMID:22160680 PMID:33219378 PMID:8224611 PMID:10710493 GO_REF:0000033 GO_REF:0000041 GO_REF:0000117, RGD:2303736, RGD:2304070 NCBI chr 2:102,611,888...102,653,916
Ensembl chr 2:102,598,496...102,653,797 		JBrowse link
G Gys1 glycogen synthase 1 involved_in
acts_upstream_of_or_within		 IDA
IBA
ISO
IEA		 GO_REF:0000033
MGI:3052742 (PMID:15282316)
MGI:4432767 (PMID:17118331), (PMID:20300197), (PMID:21356517), (PMID:33219378)
GO_REF:0000041		 GO_Central
RGD
UniProt		 PMID:15282316 PMID:17118331 PMID:20300197 PMID:21356517 PMID:33219378 More... GO_REF:0000033 GO_REF:0000041, RGD:2303748, RGD:1642743 NCBI chr 1:95,915,443...95,935,292
Ensembl chr 1:95,915,443...95,935,292 		JBrowse link
G Gys2 glycogen synthase 2 involved_in IDA
IBA
ISO
IEA		 GO_REF:0000033
MGI:4462836 (PMID:28483921)
(PMID:1731614), (PMID:9691087)
PMID:11415431
GO_REF:0000041		 GO_Central
RGD
UniProt		 PMID:1731614 PMID:9691087 PMID:28483921 PMID:15138155 PMID:11415431 More... GO_REF:0000033 GO_REF:0000041, RGD:1582633, RGD:8554625, RGD:8554840, RGD:1642743, RGD:2304128 NCBI chr 4:175,365,054...175,406,228
Ensembl chr 4:175,365,054...175,406,228 		JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in		 ISO MGI:1341085 (PMID:28536304)
MGI:3808349|MGI:5312923 (PMID:20538597), (PMID:31042462)		 RGD PMID:20538597 PMID:28536304 PMID:31042462 NCBI chr17:17,674,303...17,677,144
Ensembl chr17:17,674,319...17,677,148 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
UniProtKB:O54943 (MGI:4429726|PMID:20159955)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20159955 GO_REF:0000024 GO_REF:0000107 MGI:4429726 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q3UV55 (MGI:4429726|PMID:20159955)		 UniProt
RGD		 PMID:20159955 GO_REF:0000024 MGI:4429726 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Pgm2 phosphoglucomutase 2 involved_in ISO MGI:95909 (PMID:24265765) RGD PMID:24265765 NCBI chr14:44,166,314...44,199,828
Ensembl chr14:44,164,425...44,199,967 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:10683377)
(PMID:9045612)
GO_REF:0000104		 UniProt
RGD		 PMID:9045612 PMID:10683377 GO_REF:0000024 GO_REF:0000104 NCBI chr 1:234,460,958...234,465,961
Ensembl chr 1:234,460,652...234,465,961 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G acts_upstream_of ISO (PMID:21471512) RGD PMID:21471512 NCBI chr17:28,874,956...28,878,288
Ensembl chr17:28,876,482...28,877,525 		JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:76,295,715...76,304,959
Ensembl chr 9:76,295,715...76,304,959 		JBrowse link
G Ptges3 prostaglandin E synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3701300 (PMID:17438133)		 Ensembl
RGD		 PMID:17438133 GO_REF:0000107 NCBI chr 7:490,698...507,759
Ensembl chr 7:490,656...508,084 		JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in IEA
ISO		 GO_REF:0000041
(PMID:32286295)
(PMID:31820119)		 UniProt
RGD		 PMID:31820119 PMID:32286295 GO_REF:0000041 NCBI chr14:95,456,330...95,497,483
Ensembl chr14:95,456,330...95,496,830 		JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:11289049) RGD PMID:11289049 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IMP RGD PMID:8349040 RGD:1625425 NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:119,496,714...119,546,471 		JBrowse link
G Grb10 growth factor receptor bound protein 10 involved_in IDA PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chr14:86,495,051...86,602,800
Ensembl chr14:86,495,054...86,602,806 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO
IBA		 (PMID:12556481)
GO_REF:0000033
(MGI:5294535|PMID:19250614)		 RGD
GO_Central		 PMID:12556481 PMID:19250614 GO_REF:0000033 MGI:5294535 NCBI chr10:60,474,262...60,495,813
Ensembl chr10:60,475,897...60,496,773 		JBrowse link
G Insr insulin receptor IEP RGD PMID:26300412 RGD:11529553 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Mir15b microRNA 15b acts_upstream_of ISO (PMID:26179126) RGD PMID:26179126 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297 		JBrowse link
G Mir195 microRNA 195 acts_upstream_of ISO (PMID:25240198) RGD PMID:25240198 NCBI chr10:54,951,838...54,951,924
Ensembl chr10:54,951,838...54,951,924 		JBrowse link
G Pask PAS domain containing serine/threonine kinase involved_in ISO
IBA		 (PMID:16275910)
GO_REF:0000033		 RGD
GO_Central		 PMID:16275910 GO_REF:0000033 NCBI chr 9:93,844,275...93,886,036
Ensembl chr 9:93,844,278...93,885,111 		JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within ISO MGI:3055131 (PMID:15857891) RGD PMID:15857891 NCBI chr 9:76,295,715...76,304,959
Ensembl chr 9:76,295,715...76,304,959 		JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817 		JBrowse link
G C1qtnf2 C1q and TNF related 2 acts_upstream_of_or_within ISO (PMID:15231994) RGD PMID:15231994 NCBI chr10:27,941,948...27,958,926
Ensembl chr10:27,941,948...27,959,185 		JBrowse link
G Cd36 CD36 molecule IDA RGD PMID:14640889 RGD:1600636 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903 		JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in ISO (PMID:11311121) RGD PMID:11311121 NCBI chr 7:54,348,724...54,381,363
Ensembl chr 7:54,349,610...54,380,106 		JBrowse link
G Epm2aip1 EPM2A interacting protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3857785 (PMID:24142699)		 GO_Central
RGD		 PMID:24142699 GO_REF:0000033 NCBI chr 8:111,233,871...111,241,219
Ensembl chr 8:111,233,826...111,241,871 		JBrowse link
G Esrrb estrogen-related receptor beta involved_in IDA
ISO		 PMID:24481529
(MGI:5905261|PMID:24481529)		 RGD PMID:24481529 PMID:24481529 MGI:5905261, RGD:12910990 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Gck glucokinase involved_in ISO
ISS
IEA		 (PMID:8878425)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:8878425 GO_REF:0000024 GO_REF:0000107 NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
ISS
IEA		 (PMID:21076856)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:21076856 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Igf2 insulin-like growth factor 2 acts_upstream_of ISO (MGI:4438697|PMID:20032056) RGD PMID:20032056 MGI:4438697 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:17925406) RGD PMID:17925406 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Insr insulin receptor involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:17925406)
(MGI:4438697|PMID:20032056)		 Ensembl
RGD		 PMID:17925406 PMID:20032056 GO_REF:0000107 MGI:4438697 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 9:83,552,964...83,605,797
Ensembl chr 9:83,548,944...83,606,122 		JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) RGD PMID:16814735 NCBI chr16:78,488,249...78,512,482
Ensembl chr16:78,485,045...78,512,482 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E involved_in IMP PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chr15:28,348,443...28,349,603
Ensembl chr15:28,347,854...28,349,603 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G acts_upstream_of_or_within ISO (PMID:21471512) RGD PMID:21471512 NCBI chr17:28,874,956...28,878,288
Ensembl chr17:28,876,482...28,877,525 		JBrowse link
G Pth parathyroid hormone involved_in ISS
ISO		 GO_REF:0000024
(PMID:21076856)		 UniProt
RGD		 PMID:21076856 GO_REF:0000024 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530 		JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in ISO (MGI:3690172|PMID:11001060) RGD PMID:11001060 MGI:3690172 NCBI chr 1:239,107,882...239,330,276
Ensembl chr 1:239,108,777...239,330,169 		JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:8940145) RGD PMID:8940145 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (MGI:5294535|PMID:19250614) RGD PMID:19250614 MGI:5294535 NCBI chr10:60,474,262...60,495,813
Ensembl chr10:60,475,897...60,496,773 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IDA
IMP		 RGD PMID:17142137 PMID:17142137 RGD:1625611, RGD:1625611 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha IDA RGD PMID:7720853 RGD:2304267 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta IDA RGD PMID:7720853 RGD:2304267 NCBI chr 6:23,958,813...23,992,841
Ensembl chr 6:23,960,998...23,992,824 		JBrowse link
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:42,937,353...42,980,195
Ensembl chr 4:42,939,599...42,980,638 		JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7720853 PMID:11716774 GO_REF:0000033, RGD:2304267, RGD:2306167 NCBI chr16:56,830,011...56,842,395
Ensembl chr16:56,829,660...56,842,406 		JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11716774 GO_REF:0000033, RGD:2306167 NCBI chr 1:234,460,958...234,465,961
Ensembl chr 1:234,460,652...234,465,961 		JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11716774 GO_REF:0000033, RGD:2306167 NCBI chr 3:165,502,384...165,505,455
Ensembl chr 3:165,502,384...165,505,455 		JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:15752363 GO_REF:0000033, RGD:2306166 NCBI chr15:28,348,443...28,349,603
Ensembl chr15:28,347,854...28,349,603 		JBrowse link
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F acts_upstream_of_or_within ISO (PMID:21668450) RGD PMID:21668450 NCBI chr  X:14,915,740...14,945,249
Ensembl chr  X:14,929,323...14,945,193 		JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:28,874,956...28,878,288
Ensembl chr17:28,876,482...28,877,525 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19870
    metabolic process 11602
      macromolecule metabolic process 9394
        polysaccharide metabolic process 118
          glucan metabolic process 97
            glucan biosynthetic process 47
              alpha-glucan biosynthetic process + 0
              beta-glucan biosynthetic process + 0
              glycogen biosynthetic process + 47
              osmoregulated periplasmic glucan biosynthetic process 0
              pullulan biosynthetic process 0
              regulation of glucan biosynthetic process + 34
              starch biosynthetic process + 0
              xyloglucan biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 19870
    metabolic process 11602
      primary metabolic process 10139
        carbohydrate metabolic process 627
          polysaccharide metabolic process 118
            polysaccharide biosynthetic process 67
              glucan biosynthetic process 47
                alpha-glucan biosynthetic process + 0
                beta-glucan biosynthetic process + 0
                glycogen biosynthetic process + 47
                osmoregulated periplasmic glucan biosynthetic process 0
                pullulan biosynthetic process 0
                regulation of glucan biosynthetic process + 34
                starch biosynthetic process + 0
                xyloglucan biosynthetic process 0
paths to the root