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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of viral process
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Accession:GO:0048524 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of a multi-organism process in which a virus is a participant.
Synonyms:narrow_synonym: activation of viral life cycle;   positive regulation of viral life cycle;   positive regulation of viral reproduction;   stimulation of viral life cycle;   up regulation of viral life cycle;   upregulation of viral life cycle


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positive regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family involved_in ISO
IEA 		(PMID:22072966)
GO_REF:0000107 		RGD
Ensembl		 PMID:22072966 GO_REF:0000107 NCBI chr 4:122,019,281...122,068,067
Ensembl chr 4:121,983,938...122,064,185 		JBrowse link
G Stom stomatin involved_in ISO
IEA 		(PMID:25262680)
GO_REF:0000107 		RGD
Ensembl		 PMID:25262680 GO_REF:0000107 NCBI chr 3:39,042,503...39,064,818
Ensembl chr 3:39,042,503...39,064,818 		JBrowse link
G Tmem250 transmembrane protein 250 involved_in ISO
IEA 		(PMID:21667337)
GO_REF:0000107 		RGD
Ensembl		 PMID:21667337 GO_REF:0000107 NCBI chr 3:29,360,770...29,364,756
Ensembl chr 3:29,360,770...29,364,462 		JBrowse link
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:23137809) RGD PMID:23137809 NCBI chr 1:216,677,810...216,703,605
Ensembl chr 1:216,677,810...216,703,596 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO
IEA 		(PMID:18160438)
GO_REF:0000107 		RGD
Ensembl		 PMID:18160438 GO_REF:0000107 NCBI chr 8:74,396,441...74,433,700
Ensembl chr 8:74,396,442...74,433,700 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO
IEA 		(PMID:23907398)
GO_REF:0000107 		RGD
Ensembl		 PMID:23907398 GO_REF:0000107 NCBI chr 3:176,099,053...176,144,947
Ensembl chr 3:176,099,053...176,144,947 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 involved_in ISO
IEA 		(PMID:17686842)
GO_REF:0000107 		RGD
Ensembl		 PMID:17686842 GO_REF:0000107 NCBI chr 3:161,228,699...161,247,319
Ensembl chr 3:161,228,785...161,247,316 		JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO
IEA 		(PMID:24514761)
GO_REF:0000107 		RGD
Ensembl		 PMID:24514761 GO_REF:0000107 NCBI chr  X:152,284,857...152,322,686
Ensembl chr  X:152,284,841...152,322,675 		JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Top2a DNA topoisomerase II alpha involved_in IEA
ISO 		GO_REF:0000107
(PMID:16712776) 		Ensembl
RGD		 PMID:16712776 GO_REF:0000107 NCBI chr10:84,441,954...84,473,093
Ensembl chr10:84,441,954...84,473,366 		JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO
IEA 		(PMID:16712776)
GO_REF:0000107 		RGD
Ensembl		 PMID:16712776 GO_REF:0000107 NCBI chr15:11,482,089...11,542,464
Ensembl chr15:11,482,089...11,542,464 		JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 involved_in ISO
IEA 		(PMID:11595185)
GO_REF:0000107 		RGD
Ensembl		 PMID:11595185 GO_REF:0000107 NCBI chr 1:106,549,035...106,578,859
Ensembl chr 1:106,535,021...106,578,775 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr12:38,220,973...38,249,935
Ensembl chr12:38,220,959...38,249,935 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO
IEA 		(PMID:24878737)
GO_REF:0000107 		RGD
Ensembl		 PMID:24878737 GO_REF:0000107 NCBI chr19:51,838,411...51,858,639
Ensembl chr19:51,833,914...51,872,423 		JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin involved_in ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr 7:10,643,788...10,651,005
Ensembl chr 7:10,643,789...10,651,005 		JBrowse link
G Cd4 Cd4 molecule involved_in ISO
IEA 		(PMID:24942581)
GO_REF:0000107 		RGD
Ensembl		 PMID:24942581 GO_REF:0000107 NCBI chr 4:159,355,147...159,381,636
Ensembl chr 4:159,356,337...159,381,461 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr18:56,527,071...56,536,406
Ensembl chr18:56,527,132...56,536,410 		JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:143,757,389...143,770,430
Ensembl chr 1:143,757,391...143,773,497 		JBrowse link
G Lgals1 galectin 1 involved_in ISO
IEA 		(PMID:21670307)
GO_REF:0000107 		RGD
Ensembl		 PMID:21670307 GO_REF:0000107 NCBI chr 7:112,365,695...112,368,801
Ensembl chr 7:112,361,850...112,368,800 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:64,405,044...64,428,249
Ensembl chr10:64,405,044...64,428,070 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:52,998,662...53,061,745
Ensembl chr 8:52,998,662...53,086,664 		JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO
IEA 		(PMID:21670307)
GO_REF:0000107 		RGD
Ensembl		 PMID:21670307 GO_REF:0000107 NCBI chr10:106,335,300...106,346,911
Ensembl chr10:106,335,300...106,346,911 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,550,594...4,560,182
Ensembl chr20:4,550,596...4,560,165 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:169,304,772...169,308,615
Ensembl chr 1:169,304,708...169,308,614 		JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:54,372,805...54,405,157
Ensembl chr 8:54,372,805...54,405,157 		JBrowse link
G Trim11 tripartite motif-containing 11 involved_in ISO
IEA 		(PMID:18248090)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:18248090 GO_REF:0000107 GO_REF:0000117 NCBI chr10:44,255,019...44,270,711
Ensembl chr10:44,257,874...44,270,711 		JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:166,376,829...166,399,441
Ensembl chr 1:166,376,829...166,399,449 		JBrowse link
G Trim38 tripartite motif containing 38 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:41,774,419...41,787,709 JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:18362360)
(PMID:18362360), (PMID:19651874) 		UniProt
Ensembl
RGD		 PMID:18362360 PMID:19651874 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:177,436,076...177,475,969
Ensembl chr 2:177,436,094...177,475,971 		JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:21289159)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:21289159 GO_REF:0000024 GO_REF:0000107 NCBI chr20:11,222,171...11,350,416
Ensembl chr20:11,222,164...11,350,415 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO
IEA 		(PMID:23386060)
GO_REF:0000107 		RGD
Ensembl		 PMID:23386060 GO_REF:0000107 NCBI chr16:58,478,882...58,498,046
Ensembl chr16:58,478,900...58,498,046 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO (PMID:23137809) RGD PMID:23137809 NCBI chr 1:216,677,810...216,703,605
Ensembl chr 1:216,677,810...216,703,596 		JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked involved_in ISO (PMID:20862261) RGD PMID:20862261 NCBI chr  X:12,152,346...12,165,983
Ensembl chr  X:12,152,346...12,165,983 		JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 involved_in ISO
IEA 		(PMID:26567527)
GO_REF:0000107 		RGD
Ensembl		 PMID:26567527 GO_REF:0000107 NCBI chr12:26,947,443...27,026,913
Ensembl chr12:26,947,384...27,026,913 		JBrowse link
G Gbp7 guanylate binding protein 7 involved_in ISO (PMID:33408175) RGD PMID:33408175 NCBI chr 2:233,948,774...233,970,532
Ensembl chr 2:233,948,677...233,970,526 		JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO
IEA 		(PMID:18160438)
GO_REF:0000107 		RGD
Ensembl		 PMID:18160438 GO_REF:0000107 NCBI chr 8:74,396,441...74,433,700
Ensembl chr 8:74,396,442...74,433,700 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO
IEA 		(PMID:26735137)
GO_REF:0000107 		RGD
Ensembl		 PMID:26735137 GO_REF:0000107 NCBI chr10:42,691,833...42,746,816
Ensembl chr10:42,691,600...42,746,816 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO
IEA 		(PMID:21191019)
GO_REF:0000107 		RGD
Ensembl		 PMID:21191019 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:29,676,171...29,721,613 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 involved_in ISO
IEA 		(PMID:19264593)
GO_REF:0000107 		RGD
Ensembl		 PMID:19264593 GO_REF:0000107 NCBI chr13:50,865,253...50,985,107
Ensembl chr13:50,867,920...50,984,938 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:26735137) RGD PMID:26735137 NCBI chr 7:69,662,513...69,674,806
Ensembl chr 7:69,663,068...69,675,050 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15231837) 		Ensembl
RGD		 PMID:15231837 GO_REF:0000107 NCBI chr16:1,926,807...1,932,383
Ensembl chr16:1,922,131...1,932,611 		JBrowse link
G Pkn2 protein kinase N2 involved_in ISO (PMID:15364941) RGD PMID:15364941 NCBI chr 2:234,454,001...234,559,369
Ensembl chr 2:234,454,001...234,594,649 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr14:85,491,223...85,496,884
Ensembl chr14:85,492,484...85,497,115 		JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 2:167,025,985...167,037,998
Ensembl chr 2:167,025,931...167,054,493 		JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:140,691,285...140,704,347
Ensembl chr 5:140,683,801...140,740,767 		JBrowse link
G Ppih peptidylprolyl isomerase H involved_in ISO
IEA 		(PMID:19932913)
GO_REF:0000107 		RGD
Ensembl		 PMID:19932913 GO_REF:0000107 NCBI chr 5:138,191,624...138,209,625
Ensembl chr 5:138,191,624...138,209,580 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO
IEA 		(PMID:20614012)
GO_REF:0000107 		RGD
Ensembl		 PMID:20614012 GO_REF:0000107 NCBI chr19:40,219,235...40,225,543
Ensembl chr19:40,219,636...40,225,543 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO
IEA 		(PMID:20498328)
GO_REF:0000107 		RGD
Ensembl		 PMID:20498328 GO_REF:0000107 NCBI chr20:6,647,539...6,684,129
Ensembl chr20:6,649,450...6,683,835 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO
IEA 		(PMID:20498328)
GO_REF:0000107 		RGD
Ensembl		 PMID:20498328 GO_REF:0000107 NCBI chr 4:12,356,983...12,548,345
Ensembl chr 4:12,357,053...12,548,342 		JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO
IEA 		(PMID:23907398)
GO_REF:0000107 		RGD
Ensembl		 PMID:23907398 GO_REF:0000107 NCBI chr 3:176,099,053...176,144,947
Ensembl chr 3:176,099,053...176,144,947 		JBrowse link
G Tarbp2 Tarbp2 subunit of RISC loading complex involved_in ISO
IEA
ISS 		(PMID:11641396)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:11641396 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:135,527,710...135,532,826
Ensembl chr 7:135,527,589...135,533,323 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IEA 		(PMID:31849860)
GO_REF:0000107 		RGD
Ensembl		 PMID:31849860 GO_REF:0000107 NCBI chr11:75,666,154...75,695,486
Ensembl chr11:75,666,154...75,695,486 		JBrowse link
G Trim38 tripartite motif containing 38 acts_upstream_of_or_within ISO (PMID:22539786) RGD PMID:22539786 NCBI chr17:41,774,419...41,787,709 JBrowse link
G Vapb VAMP associated protein B and C involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:16227268) 		UniProt
Ensembl
RGD		 PMID:16227268 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:182,954,247...182,997,018
Ensembl chr 3:182,954,240...183,028,619 		JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:78,986,252...79,022,638
Ensembl chr 8:78,986,242...79,022,631 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:90,392,864...90,424,009 		JBrowse link
G Cd209d CD209d molecule involved_in ISO (PMID:22673088) RGD PMID:22673088 NCBI chr12:6,689,002...6,695,452
Ensembl chr12:6,689,002...6,698,976 		JBrowse link
G Clec4g C-type lectin domain family 4, member G involved_in ISO
IEA 		(PMID:22673088)
GO_REF:0000107 		RGD
Ensembl		 PMID:22673088 GO_REF:0000107 NCBI chr12:6,578,266...6,582,913
Ensembl chr12:6,578,258...6,582,894 		JBrowse link
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:28189564)
GO_REF:0000117 		RGD
UniProt		 PMID:28189564 GO_REF:0000117 NCBI chr10:92,433,678...92,445,841
Ensembl chr10:92,433,679...92,445,937 		JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO
IEA 		(PMID:28189564)
GO_REF:0000107
MGI:3856636 (PMID:28189564) 		RGD
Ensembl		 PMID:28189564 GO_REF:0000107 NCBI chr 5:147,272,466...147,307,523
Ensembl chr 5:147,275,918...147,305,851 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO
IEA 		(PMID:22673088)
GO_REF:0000107 		RGD
Ensembl		 PMID:22673088 GO_REF:0000107 NCBI chr 3:127,231,468...127,254,806
Ensembl chr 3:127,231,903...127,250,943 		JBrowse link
positive regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO
IEA 		(PMID:11096080)
GO_REF:0000107 		RGD
Ensembl		 PMID:11096080 GO_REF:0000107 NCBI chr13:68,152,813...68,189,580
Ensembl chr13:68,152,813...68,189,546 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 IDA from cytomegalovirus immediate-early promoter RGD PMID:11746500 RGD:2293493 NCBI chr 2:45,081,889...45,150,555
Ensembl chr 2:45,081,889...45,149,897 		JBrowse link
G Mdfic MyoD family inhibitor domain containing involved_in ISO
IEA 		(PMID:10671520)
GO_REF:0000107 		RGD
Ensembl		 PMID:10671520 GO_REF:0000107 NCBI chr 4:44,938,301...45,018,157
Ensembl chr 4:44,938,480...45,018,156 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:21191019) RGD PMID:21191019 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:29,676,171...29,721,613 		JBrowse link
G Pfn1 profilin 1 IMP RGD PMID:12740026 RGD:2324854 NCBI chr10:55,863,882...55,866,587
Ensembl chr10:55,863,881...55,868,611 		JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO
IEA 		(PMID:11788598)
GO_REF:0000107 		RGD
Ensembl		 PMID:11788598 GO_REF:0000107 NCBI chr 1:161,303,596...161,426,326
Ensembl chr 1:161,303,660...161,420,290 		JBrowse link
positive regulation of viral translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in ISO (PMID:19666601) RGD PMID:19666601 NCBI chr18:41,638,841...41,649,311
Ensembl chr18:41,635,835...41,649,261 		JBrowse link
G Atg5 autophagy related 5 involved_in ISO
IEA 		(PMID:19666601)
GO_REF:0000107 		RGD
Ensembl		 PMID:19666601 GO_REF:0000107 NCBI chr20:49,380,835...49,471,826
Ensembl chr20:49,380,813...49,471,821 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    positive regulation of biological process 6854
      positive regulation of viral process 63
        positive regulation by virus of viral protein levels in host cell 4
        positive regulation of viral genome replication + 28
        positive regulation of viral life cycle + 25
        positive regulation of viral transcription 6
        positive regulation of viral translation 2
Path 2
Term Annotations click to browse term
  biological_process 20668
    biological regulation 13898
      regulation of biological process 13474
        positive regulation of biological process 6854
          positive regulation of viral process 63
            positive regulation by virus of viral protein levels in host cell 4
            positive regulation of viral genome replication + 28
            positive regulation of viral life cycle + 25
            positive regulation of viral transcription 6
            positive regulation of viral translation 2
paths to the root