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Gene: Stom (stomatin) Rattus norvegicus
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Symbol: Stom
Name: stomatin
Description: Predicted to have RNA polymerase binding activity and protein homodimerization activity. Predicted to be involved in positive regulation by host of viral genome replication; positive regulation of protein targeting to membrane; and regulation of acid-sensing ion channel activity. Predicted to localize to several cellular components, including endoplasmic reticulum; membrane raft; and perinuclear region of cytoplasm. Orthologous to human STOM (stomatin); INTERACTS WITH acetamide; acrylamide; benzene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: erythrocyte band 7 integral membrane protein; LOC296655
Orthologs:
Homo sapiens (human) : STOM (stomatin)  HGNC  Alliance
Mus musculus (house mouse) : Stom (stomatin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Stom (stomatin)
Pan paniscus (bonobo/pygmy chimpanzee) : STOM (stomatin)
Canis lupus familiaris (dog) : STOM (stomatin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Stom (stomatin)
Sus scrofa (pig) : STOM (stomatin)
Chlorocebus sabaeus (African green monkey) : STOM (stomatin)
Heterocephalus glaber (naked mole-rat) : Stom (stomatin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0314,515,576 - 14,538,199 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl314,514,868 - 14,538,241 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0319,833,117 - 19,855,740 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4314,392,978 - 14,415,288 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1314,289,349 - 14,311,660 (-)NCBI
Celera313,358,166 - 13,380,297 (-)NCBICelera
Cytogenetic Map3p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Stom
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305109
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.