Ppih (peptidylprolyl isomerase H) - Rat Genome Database

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Gene: Ppih (peptidylprolyl isomerase H) Rattus norvegicus
Analyze
Symbol: Ppih
Name: peptidylprolyl isomerase H
RGD ID: 1564921
Description: Predicted to enable peptidyl-prolyl cis-trans isomerase activity and ribonucleoprotein complex binding activity. Predicted to be involved in positive regulation of viral genome replication. Predicted to be located in cytoplasm and nuclear speck. Predicted to be part of U4/U6 snRNP and U4/U6 x U5 tri-snRNP complex. Orthologous to human PPIH (peptidylprolyl isomerase H); PARTICIPATES IN spliceosome pathway; INTERACTS WITH 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil; alpha-Zearalanol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC366461; peptidyl-prolyl cis-trans isomerase H; peptidylprolyl isomerase H (cyclophilin H); RGD1564921; similar to peptidyl prolyl isomerase H
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85138,191,624 - 138,209,625 (-)NCBIGRCr8
mRatBN7.25132,906,324 - 132,924,341 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5132,906,328 - 132,924,267 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5135,633,875 - 135,652,694 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05137,390,334 - 137,409,153 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05137,410,930 - 137,429,749 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05138,343,934 - 138,361,743 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5138,352,916 - 138,361,702 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05142,160,007 - 142,178,024 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45139,959,365 - 139,969,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5131,431,800 - 131,449,612 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
17alpha-ethynylestradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3-dimethoxynaphthalene-1,4-dione  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
alpha-Zearalanol  (EXP)
antimony(0)  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chlorpyrifos  (ISO)
chromium atom  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
dextran sulfate  (ISO)
diarsenic trioxide  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
doxorubicin  (ISO)
Evodiamine  (ISO)
ivermectin  (ISO)
mercury atom  (ISO)
mercury(0)  (ISO)
methamphetamine  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
ozone  (ISO)
paracetamol  (ISO)
perfluorooctanoic acid  (EXP)
phenethyl isothiocyanate  (EXP)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tamoxifen  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (EXP)
titanium dioxide  (ISO)
Tributyltin oxide  (ISO)
trimellitic anhydride  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
Yessotoxin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Spliceosomal immunophilins. Mesa A, etal., FEBS Lett. 2008 Jul 9;582(16):2345-51. doi: 10.1016/j.febslet.2008.06.006. Epub 2008 Jun 9.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:9570313   PMID:19932913   PMID:20676357  


Genomics

Comparative Map Data
Ppih
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85138,191,624 - 138,209,625 (-)NCBIGRCr8
mRatBN7.25132,906,324 - 132,924,341 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5132,906,328 - 132,924,267 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5135,633,875 - 135,652,694 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05137,390,334 - 137,409,153 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05137,410,930 - 137,429,749 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05138,343,934 - 138,361,743 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5138,352,916 - 138,361,702 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05142,160,007 - 142,178,024 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45139,959,365 - 139,969,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5131,431,800 - 131,449,612 (-)NCBICelera
Cytogenetic Map5q36NCBI
PPIH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38142,658,423 - 42,681,654 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl142,658,335 - 42,676,758 (+)EnsemblGRCh38hg38GRCh38
GRCh37143,124,094 - 43,142,429 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36142,896,635 - 42,915,016 (+)NCBINCBI36Build 36hg18NCBI36
Build 34142,793,140 - 42,811,521NCBI
Celera141,405,975 - 41,424,356 (+)NCBICelera
Cytogenetic Map1p34.2NCBI
HuRef141,244,218 - 41,262,600 (+)NCBIHuRef
CHM1_1143,240,906 - 43,259,287 (+)NCBICHM1_1
T2T-CHM13v2.0142,528,918 - 42,552,149 (+)NCBIT2T-CHM13v2.0
Ppih
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394119,157,207 - 119,177,720 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4119,157,207 - 119,177,743 (-)EnsemblGRCm39 Ensembl
GRCm384119,300,010 - 119,320,523 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4119,300,010 - 119,320,546 (-)EnsemblGRCm38mm10GRCm38
MGSCv374118,972,615 - 118,993,128 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364118,797,947 - 118,818,411 (-)NCBIMGSCv36mm8
Celera4118,027,842 - 118,048,366 (-)NCBICelera
Cytogenetic Map4D2.1NCBI
cM Map455.34NCBI
Ppih
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555372,211,410 - 2,230,452 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555372,211,566 - 2,229,444 (+)NCBIChiLan1.0ChiLan1.0
PPIH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21184,130,421 - 184,153,502 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11183,272,085 - 183,295,157 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0141,958,260 - 41,981,598 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1143,336,039 - 43,354,609 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl143,336,039 - 43,353,898 (+)Ensemblpanpan1.1panPan2
PPIH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.115671,323 - 689,627 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl15671,324 - 689,544 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha15926,045 - 944,371 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.015752,681 - 771,039 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl15752,682 - 770,962 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.115662,128 - 680,381 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.015723,569 - 741,836 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.015738,714 - 757,011 (-)NCBIUU_Cfam_GSD_1.0
Ppih
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505858,179,131 - 58,200,103 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647424,003,827 - 24,024,922 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647424,003,963 - 24,024,885 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPIH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6168,742,005 - 168,760,286 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16168,741,999 - 168,760,350 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26156,223,015 - 156,241,360 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PPIH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12090,250,959 - 90,275,275 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2090,256,081 - 90,274,751 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603326,635,055 - 26,659,466 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ppih
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248921,916,912 - 1,935,875 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248921,916,873 - 1,935,458 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:132
Count of miRNA genes:102
Interacting mature miRNAs:109
Transcripts:ENSRNOT00000064712, ENSRNOT00000067943
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)5102105698152749382Rat
2303586Gluco52Glucose level QTL 522blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)5100826632145826632Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5130249266172190305Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)544924861153890773Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5116702075161702075Rat
1354583Despr3Despair related QTL34.980.0002locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)5132930505172190305Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5130678987145274255Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)599905133172190305Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5134369218156289444Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5133789363172190305Rat
1331803Rf32Renal function QTL 322.798kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)5134369199172190305Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)565089051166764498Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5136631198172190305Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5112142946157142946Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5112142946157142946Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5110770739155770739Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5133081618172190305Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)551657967166600247Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5138002522170842766Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5112142946157142946Rat
1581505Rf54Renal function QTL 54kidney physiology trait (VT:0002136)kidney 20-HETE level (CMO:0001854)5133270647172190305Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5133789363172190305Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)598972960143972960Rat
1581510Cm54Cardiac mass QTL 543.40.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)5125969677172190305Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
2303618Vencon1Ventilatory control QTL 13.8respiration trait (VT:0001943)oxygen consumption (CMO:0002169)5100826632145826632Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5111236572156236572Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)594034903139034903Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5131708216172190305Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5114131300159131300Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5125969677156302135Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5112142946157142946Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5116702075161702075Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5112142946157142946Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5116702075161702075Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)574335621156302135Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5116702075161702075Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5114131300159131300Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133081618172190305Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)5104262817153890625Rat

Markers in Region
D5Got61  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25132,914,427 - 132,914,706 (+)MAPPERmRatBN7.2
Rnor_6.05138,351,877 - 138,352,155NCBIRnor6.0
Rnor_5.05142,168,168 - 142,168,446UniSTSRnor5.0
RGSC_v3.45139,891,233 - 139,891,512RGDRGSC3.4
RGSC_v3.45139,891,234 - 139,891,512UniSTSRGSC3.4
RGSC_v3.15139,896,460 - 139,896,738RGD
Celera5131,439,743 - 131,440,021UniSTS
RH 3.4 Map5870.8UniSTS
RH 3.4 Map5870.8RGD
RH 2.0 Map5863.1RGD
Cytogenetic Map5q36UniSTS
RH138343  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25132,912,194 - 132,912,346 (+)MAPPERmRatBN7.2
Rnor_6.05138,349,644 - 138,349,795NCBIRnor6.0
Rnor_5.05142,165,717 - 142,165,868UniSTSRnor5.0
RGSC_v3.45139,889,001 - 139,889,152UniSTSRGSC3.4
Celera5131,437,510 - 131,437,661UniSTS
RH 3.4 Map5866.2UniSTS
RH 3.4 Map5868.5UniSTS
Cytogenetic Map5q36UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000064712   ⟹   ENSRNOP00000063468
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,916,003 - 132,924,267 (-)Ensembl
Rnor_6.0 Ensembl5138,353,452 - 138,361,702 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000067943   ⟹   ENSRNOP00000059353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,915,467 - 132,924,267 (-)Ensembl
Rnor_6.0 Ensembl5138,352,916 - 138,361,702 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098415   ⟹   ENSRNOP00000076976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,915,757 - 132,924,267 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108155   ⟹   ENSRNOP00000088556
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,906,328 - 132,924,265 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112897   ⟹   ENSRNOP00000079411
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5132,912,180 - 132,924,265 (-)Ensembl
RefSeq Acc Id: NM_001399453   ⟹   NP_001386382
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85138,191,624 - 138,209,580 (-)NCBI
mRatBN7.25132,906,324 - 132,924,280 (-)NCBI
RefSeq Acc Id: XM_006238771   ⟹   XP_006238833
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85138,197,493 - 138,209,625 (-)NCBI
mRatBN7.25132,912,046 - 132,924,341 (-)NCBI
Rnor_6.05138,349,495 - 138,361,743 (-)NCBI
Rnor_5.05142,160,007 - 142,178,024 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006238772   ⟹   XP_006238834
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85138,197,493 - 138,209,625 (-)NCBI
mRatBN7.25132,912,046 - 132,924,341 (-)NCBI
Rnor_6.05138,349,495 - 138,361,743 (-)NCBI
Rnor_5.05142,160,007 - 142,178,024 (-)NCBI
Sequence:
RefSeq Acc Id: XP_006238833   ⟸   XM_006238771
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZMT9 (UniProtKB/TrEMBL),   A6JZN2 (UniProtKB/TrEMBL),   A0A8I6A6F0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006238834   ⟸   XM_006238772
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZMT9 (UniProtKB/TrEMBL),   A6JZN2 (UniProtKB/TrEMBL),   A0A8I6A6F0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000059353   ⟸   ENSRNOT00000067943
Ensembl Acc Id: ENSRNOP00000063468   ⟸   ENSRNOT00000064712
Ensembl Acc Id: ENSRNOP00000088556   ⟸   ENSRNOT00000108155
Ensembl Acc Id: ENSRNOP00000076976   ⟸   ENSRNOT00000098415
Ensembl Acc Id: ENSRNOP00000079411   ⟸   ENSRNOT00000112897
RefSeq Acc Id: NP_001386382   ⟸   NM_001399453
- UniProtKB: A0A8I6A6F0 (UniProtKB/TrEMBL),   A0A8I5ZMT9 (UniProtKB/TrEMBL),   A6JZN2 (UniProtKB/TrEMBL)
Protein Domains
PPIase cyclophilin-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A5R0-F1-model_v2 AlphaFold D4A5R0 1-176 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693984
Promoter ID:EPDNEW_R4505
Type:multiple initiation site
Name:Ppih_1
Description:peptidylprolyl isomerase H
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05138,361,727 - 138,361,787EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564921 AgrOrtholog
BioCyc Gene G2FUF-40090 BioCyc
Ensembl Genes ENSRNOG00000008489 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000064712.3 UniProtKB/TrEMBL
  ENSRNOT00000067943.5 UniProtKB/TrEMBL
  ENSRNOT00000098415.1 UniProtKB/TrEMBL
  ENSRNOT00000108155.1 UniProtKB/TrEMBL
  ENSRNOT00000112897.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.100.10 UniProtKB/TrEMBL
InterPro Cyclophilin-like_dom UniProtKB/TrEMBL
  Cyclophilin-type_PPIase UniProtKB/TrEMBL
  Pep-Pro_Isoase_cyclophilin_CS UniProtKB/TrEMBL
  PPIase_cyclophilin UniProtKB/TrEMBL
NCBI Gene 366461 ENTREZGENE
PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE UniProtKB/TrEMBL
  PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D-RELATED UniProtKB/TrEMBL
Pfam Pro_isomerase UniProtKB/TrEMBL
PhenoGen Ppih PhenoGen
PIRSF Peptidylpro_ismrse UniProtKB/TrEMBL
PRINTS CSAPPISMRASE UniProtKB/TrEMBL
PROSITE CSA_PPIASE_1 UniProtKB/TrEMBL
  CSA_PPIASE_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008489 RatGTEx
Superfamily-SCOP SSF50891 UniProtKB/TrEMBL
UniProt A0A8I5Y5S4_RAT UniProtKB/TrEMBL
  A0A8I5ZMT9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A6F0 ENTREZGENE, UniProtKB/TrEMBL
  A6JZN2 ENTREZGENE, UniProtKB/TrEMBL
  D3ZUZ9_RAT UniProtKB/TrEMBL
  D4A5R0_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-21 Ppih  peptidylprolyl isomerase H  Ppih  peptidylprolyl isomerase H (cyclophilin H)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 Ppih  peptidylprolyl isomerase H (cyclophilin H)  RGD1564921  similar to peptidyl prolyl isomerase H  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1564921  similar to peptidyl prolyl isomerase H   RGD1564921_predicted  similar to peptidyl prolyl isomerase H (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1564921_predicted  similar to peptidyl prolyl isomerase H (predicted)  LOC366461  similar to peptidyl prolyl isomerase H  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC366461  similar to peptidyl prolyl isomerase H      Symbol and Name status set to provisional 70820 PROVISIONAL