Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:biomineral tissue development
go back to main search page
Accession:GO:0031214 term browser browse the term
Definition:Formation of hard tissues that consist mainly of inorganic compounds, and also contain a small amounts of organic matrices that are believed to play important roles in their formation.
Synonyms:xref: Wikipedia:Biomineralization


show annotations for term's descendants           Sort by:
biomineral tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALPL alkaline phosphatase, biomineralization associated involved_in IBA
IEA		 GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 NCBI chr 6:79,589,695...79,649,646
Ensembl chr 6:79,589,045...79,649,644 		JBrowse link
G AMBN ameloblastin involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:67,381,137...67,394,394
Ensembl chr 8:67,381,137...67,394,394 		JBrowse link
G AMELX amelogenin X-linked involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:8,055,246...8,063,457
Ensembl chr  X:8,055,782...8,063,449 		JBrowse link
G AMELY amelogenin, Y-linked involved_in IEA UniProt GO_REF:0000043 NCBI chr  Y:10,124,811...10,132,684
Ensembl chr  Y:10,124,811...10,132,684 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:93,807,703...93,808,806
Ensembl chr 4:93,807,706...93,808,968 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:87,749,738...87,911,818
Ensembl chr 4:87,756,168...87,911,296 		JBrowse link
G DSPP dentin sialophosphoprotein ISO RGD PMID:20425127 RGD:4110819 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761 		JBrowse link
G ENAM enamelin involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:67,416,482...67,431,196
Ensembl chr 8:67,416,469...67,433,086 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:22359666)
(PMID:25260930)		 MGI PMID:22359666 PMID:25260930 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G FAM20A FAM20A golgi associated secretory pathway pseudokinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:11,606,469...11,663,086
Ensembl chr12:11,607,034...11,657,737 		JBrowse link
G FAM20C FAM20C golgi associated secretory pathway kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:159,107...200,462
Ensembl chr 3:163,421...200,459 		JBrowse link
G IBSP integrin binding sialoprotein involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:131,208,281...131,222,048
Ensembl chr 8:131,208,282...131,241,266 		JBrowse link
G MEPE matrix extracellular phosphoglycoprotein involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:131,186,563...131,198,418
Ensembl chr 8:131,186,888...131,200,330 		JBrowse link
G ODAM odontogenic, ameloblast associated involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:67,059,284...67,068,117
Ensembl chr 8:67,058,472...67,066,564 		JBrowse link
G SLC20A1 solute carrier family 20 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27812542) Ensembl
MGI		 PMID:27812542 GO_REF:0000107 NCBI chr 3:43,844,716...43,860,547
Ensembl chr 3:43,844,722...43,860,547 		JBrowse link
G SPP1 secreted phosphoprotein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:131,077,786...131,085,334
Ensembl chr 8:131,077,786...131,085,340 		JBrowse link
G TFIP11 tuftelin interacting protein 11 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:44,097,026...44,113,760
Ensembl chr14:44,096,264...44,113,682 		JBrowse link
G TUFT1 tuftelin 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:97,648,817...97,704,654
Ensembl chr 4:97,648,818...97,703,592 		JBrowse link
bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,401,861...52,414,913
Ensembl chr12:52,401,810...52,414,903 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:52,287,174...52,295,873
Ensembl chr12:52,287,160...52,295,871 		JBrowse link
G ALPL alkaline phosphatase, biomineralization associated involved_in ISO (PMID:12082181), (PMID:15920156)
(PMID:10620060), (PMID:11028439), (PMID:12082181), (PMID:14982838), (PMID:20684022), (PMID:26457330), (PMID:9056646)
(PMID:15920156)		 MGI PMID:9056646 PMID:10620060 PMID:11028439 PMID:12082181 PMID:14982838 More... NCBI chr 6:79,589,695...79,649,646
Ensembl chr 6:79,589,045...79,649,644 		JBrowse link
G ANKH ANKH inorganic pyrophosphate transport regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:4,095,582...4,271,073
Ensembl chr16:4,105,165...4,271,170 		JBrowse link
G ASGR2 asialoglycoprotein receptor 2 ISO RGD PMID:19841953 RGD:2316850 NCBI chr12:52,479,404...52,506,569
Ensembl chr12:52,464,689...52,506,574 		JBrowse link
G ASPN asporin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:42,165,553...42,192,902
Ensembl chr 3:42,165,561...42,192,813 		JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,742,967...8,745,368 		JBrowse link
G AXIN2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19623616) Ensembl
MGI		 PMID:19623616 GO_REF:0000107 NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,298...12,343,200 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15657444), (PMID:19213727)
(PMID:19213727)		 Ensembl
MGI		 PMID:15657444 PMID:19213727 GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:207,817,095...207,821,800
Ensembl chr 1:207,818,175...207,822,291 		JBrowse link
G CLEC3B C-type lectin domain family 3 member B involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:28,219,241...28,229,113
Ensembl chr13:28,219,500...28,229,096 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22910579) Ensembl
MGI		 PMID:22910579 GO_REF:0000107 NCBI chr 9:74,174,484...74,210,407
Ensembl chr 9:74,173,931...74,210,397 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27151399) Ensembl
MGI		 PMID:27151399 GO_REF:0000107 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:23,053,129...23,058,865
Ensembl chr 5:23,053,892...23,058,470 		JBrowse link
G DLK1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:21308776) MGI PMID:21308776 NCBI chr 7:121,565,844...121,577,493
Ensembl chr 7:121,565,854...121,576,654 		JBrowse link
G DUOX2 dual oxidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17440044) Ensembl
MGI		 PMID:17440044 GO_REF:0000107 NCBI chr 1:126,620,468...126,641,406
Ensembl chr 1:126,620,510...126,641,406 		JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (PMID:11997520) MGI PMID:11997520 NCBI chr 3:57,423,894...57,506,247
Ensembl chr 3:57,423,943...57,506,245 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21930712) Ensembl
MGI		 PMID:21930712 GO_REF:0000107 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17020410) Ensembl
MGI		 PMID:17020410 GO_REF:0000107 NCBI chr 6:51,734,318...51,757,508
Ensembl chr 6:51,734,320...51,757,553 		JBrowse link
G FBXL15 F-box and leucine rich repeat protein 15 involved_in ISO PMID:21572392 UniProt PMID:21572392 RGD:8554771 NCBI chr14:113,430,169...113,434,345
Ensembl chr14:113,430,401...113,434,347 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:12756187) UniProt
MGI		 PMID:12756187 GO_REF:0000024 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 involved_in ISO (PMID:20582225) BHF-UCL PMID:20582225 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964 		JBrowse link
G FGR FGR proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16964445) Ensembl
MGI		 PMID:16964445 GO_REF:0000107 NCBI chr 6:84,809,534...84,830,401
Ensembl chr 6:84,809,542...84,830,361 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27109613), (PMID:29571322) Ensembl
MGI		 PMID:27109613 PMID:29571322 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15509771) Ensembl
MGI		 PMID:15509771 GO_REF:0000107 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068 		JBrowse link
G GATA1 GATA binding protein 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15005853) Ensembl
MGI		 PMID:15005853 GO_REF:0000107 NCBI chr  X:42,898,431...42,905,939
Ensembl chr  X:42,898,442...42,905,976 		JBrowse link
G GLA galactosidase alpha NOT|acts_upstream_of_or_within ISO (PMID:16697974) MGI PMID:16697974 NCBI chr  X:83,024,582...83,032,273
Ensembl chr  X:83,023,903...83,032,570 		JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15936336) Ensembl
MGI		 PMID:15936336 GO_REF:0000107 NCBI chr  X:109,536,495...109,973,605
Ensembl chr  X:109,536,504...109,973,607 		JBrowse link
G GPNMB glycoprotein nmb ISO RGD PMID:11746512 RGD:632991 NCBI chr 9:92,037,428...92,071,501
Ensembl chr 9:92,037,509...92,071,499 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17181398) Ensembl
MGI		 PMID:17181398 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G IBSP integrin binding sialoprotein involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:25464126) Ensembl
MGI
GO_Central		 PMID:25464126 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:131,208,281...131,222,048
Ensembl chr 8:131,208,282...131,241,266 		JBrowse link
G ICMT isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO (PMID:23686339) MGI PMID:23686339 NCBI chr 6:67,116,943...67,125,908
Ensembl chr 6:67,116,946...67,123,810 		JBrowse link
G IFITM5 interferon induced transmembrane protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18442316) Ensembl
MGI
GO_Central		 PMID:18442316 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:107,035...109,116
Ensembl chr 2:107,042...108,460 		JBrowse link
G KLF10 KLF transcription factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15657444) Ensembl
MGI		 PMID:15657444 GO_REF:0000107 NCBI chr 4:34,430,132...34,435,990
Ensembl chr 4:34,429,941...34,436,004 		JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148 		JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:19248115) MGI PMID:19248115 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19458888) Ensembl
MGI		 PMID:19458888 GO_REF:0000107 NCBI chr 2:125,595,115...125,607,026
Ensembl chr 2:125,591,789...125,607,594 		JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:11790802) Ensembl
MGI		 PMID:11790802 GO_REF:0000107 NCBI chr 2:6,701,455...6,720,191
Ensembl chr 2:6,701,510...6,720,153 		JBrowse link
G MEPE matrix extracellular phosphoglycoprotein acts_upstream_of ISO (PMID:12421822) MGI PMID:12421822 NCBI chr 8:131,186,563...131,198,418
Ensembl chr 8:131,186,888...131,200,330 		JBrowse link
G MINPP1 multiple inositol-polyphosphate phosphatase 1 NOT|involved_in ISO (PMID:10938126) UniProt PMID:10938126 NCBI chr14:99,574,426...99,628,388
Ensembl chr14:99,574,440...99,628,173 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,549,003...33,616,700
Ensembl chr 9:33,549,008...33,561,162 		JBrowse link
G MTSS1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within ISO (PMID:21406566) MGI PMID:21406566 NCBI chr 4:14,933,290...15,103,256
Ensembl chr 4:14,933,331...15,103,253 		JBrowse link
G NFE2 nuclear factor, erythroid 2 acts_upstream_of ISO (PMID:15005853) MGI PMID:15005853 NCBI chr 5:19,494,672...19,501,810
Ensembl chr 5:19,494,677...19,501,810 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:17353270) MGI PMID:17353270 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567 		JBrowse link
G PHEX phosphate regulating endopeptidase X-linked involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15843468) Ensembl
MGI		 PMID:15843468 GO_REF:0000107 NCBI chr  X:18,199,396...18,420,985
Ensembl chr  X:18,203,174...18,418,004 		JBrowse link
G PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 involved_in ISO (PMID:17227223), (PMID:20684022), (PMID:26457330) UniProt PMID:17227223 PMID:20684022 PMID:26457330 NCBI chr12:25,441,564...25,449,267 JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21553379) Ensembl
MGI		 PMID:21553379 GO_REF:0000107 NCBI chr 3:98,258,456...98,268,539
Ensembl chr 3:98,258,463...98,268,553 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 acts_upstream_of_or_within ISO PMID:18519738 MGI PMID:18519738 RGD:8554572 NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884 		JBrowse link
G PTH parathyroid hormone involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19968565) Ensembl
MGI		 PMID:19968565 GO_REF:0000107 NCBI chr 2:45,757,398...45,760,433
Ensembl chr 2:45,757,398...45,760,415 		JBrowse link
G PTH1R parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11606467), (PMID:9832460) Ensembl
MGI		 PMID:9832460 PMID:11606467 GO_REF:0000107 NCBI chr13:29,749,940...29,775,361
Ensembl chr13:29,753,326...29,775,348 		JBrowse link
G PTHLH parathyroid hormone like hormone involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:11606467)
(PMID:19968565)		 InterPro
MGI		 PMID:11606467 PMID:19968565 GO_REF:0000002 NCBI chr 5:45,750,968...45,763,421
Ensembl chr 5:45,751,292...45,763,415 		JBrowse link
G PTN pleiotrophin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12413943) Ensembl
MGI		 PMID:12413943 GO_REF:0000107 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,787...12,309,044 		JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) MGI PMID:38172607 NCBI chr 3:37,592,982...37,600,004
Ensembl chr 3:37,591,815...37,602,112 		JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 ISO RGD PMID:23337931 RGD:11537369 NCBI chr14:2,803,840...3,035,384
Ensembl chr14:2,804,061...3,035,296 		JBrowse link
G RSPO2 R-spondin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19213727) Ensembl
MGI		 PMID:19213727 GO_REF:0000107 NCBI chr 4:29,415,774...29,577,890
Ensembl chr 4:29,414,752...29,579,674 		JBrowse link
G RUNX2 RUNX family transcription factor 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21930712) Ensembl
MGI		 PMID:21930712 GO_REF:0000107 NCBI chr 7:40,106,581...40,353,304
Ensembl chr 7:40,106,532...40,460,687 		JBrowse link
G SBDS SBDS ribosome maturation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:16,161,524...16,168,619
Ensembl chr 3:16,161,580...16,169,453 		JBrowse link
G SBNO2 strawberry notch homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23980096) Ensembl
MGI		 PMID:23980096 GO_REF:0000107 NCBI chr 2:77,278,059...77,320,371
Ensembl chr 2:77,275,013...77,320,367 		JBrowse link
G SLC24A3 solute carrier family 24 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28602864) Ensembl
ARUK-UCL		 PMID:28602864 GO_REF:0000107 NCBI chr17:27,270,232...27,780,535
Ensembl chr17:27,270,093...27,780,526 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21788370)
(PMID:24585429)		 Ensembl
MGI		 PMID:21788370 PMID:24585429 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:11371614) Ensembl
MGI		 PMID:11371614 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SPP1 secreted phosphoprotein 1 involved_in ISO (PMID:12817751) MGI PMID:12817751 NCBI chr 8:131,077,786...131,085,334
Ensembl chr 8:131,077,786...131,085,340 		JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:19213727) MGI PMID:19213727 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,412...123,546,417 		JBrowse link
G TMEM38B transmembrane protein 38B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27188440) Ensembl
MGI		 PMID:27188440 GO_REF:0000107 NCBI chr 1:246,973,447...247,024,019
Ensembl chr 1:246,973,436...247,027,527 		JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19213727) Ensembl
MGI		 PMID:19213727 GO_REF:0000107 NCBI chr 9:10,413,182...10,435,158
Ensembl chr 9:10,413,263...10,435,100 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23686339) Ensembl
MGI		 PMID:23686339 GO_REF:0000107 NCBI chr 6:96,008,307...96,057,131
Ensembl chr 6:96,008,455...96,062,951 		JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANO6 anoctamin 6 acts_upstream_of_or_within ISO (PMID:22936354) MGI PMID:22936354 NCBI chr 5:76,112,428...76,337,073
Ensembl chr 5:76,113,212...76,356,544 		JBrowse link
G ASXL2 ASXL transcriptional regulator 2 acts_upstream_of ISO (PMID:21490954) MGI PMID:21490954 NCBI chr 3:113,044,788...113,184,809
Ensembl chr 3:113,044,836...113,180,742 		JBrowse link
G CCDC154 coiled-coil domain containing 154 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:20121924) Ensembl
MGI
GO_Central		 PMID:20121924 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:40,420,339...40,429,787
Ensembl chr 3:40,422,892...40,429,844 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:22359666)
(PMID:25260930)		 MGI PMID:22359666 PMID:25260930 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G IFT80 intraflagellar transport 80 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26996322) Ensembl
MGI		 PMID:26996322 GO_REF:0000107 NCBI chr13:99,943,203...100,078,148
Ensembl chr13:99,943,208...100,078,148 		JBrowse link
G IGF1 insulin like growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,033 		JBrowse link
G LEP leptin ISO RGD PMID:21353474 RGD:5128507 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323 		JBrowse link
G LOC102158609 phosphoethanolamine/phosphocholine phosphatase involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:25,315,628...25,321,976 JBrowse link
G PHOSPHO1 phosphoethanolamine/phosphocholine phosphatase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21272676) MGI
GO_Central		 PMID:21272676 GO_REF:0000033 NCBI chr12:25,441,564...25,449,267 JBrowse link
G SNX10 sorting nexin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25811986) Ensembl
MGI		 PMID:25811986 GO_REF:0000107 NCBI chr18:46,064,575...46,142,983
Ensembl chr18:46,064,580...46,142,945 		JBrowse link
cementum mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALPL alkaline phosphatase, biomineralization associated ISO RGD PMID:17043865 RGD:2316162 NCBI chr 6:79,589,695...79,649,646
Ensembl chr 6:79,589,045...79,649,644 		JBrowse link
G ANKH ANKH inorganic pyrophosphate transport regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:4,095,582...4,271,073
Ensembl chr16:4,105,165...4,271,170 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G HACD1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO (PMID:25263524) UniProt PMID:25263524 NCBI chr10:43,901,590...43,929,441
Ensembl chr10:43,897,162...43,929,409 		JBrowse link
G SP7 Sp7 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:18,541,368...18,566,668
Ensembl chr 5:18,543,534...18,565,776 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chr 6:144,242,639...144,529,659
Ensembl chr 6:144,399,926...144,555,880 		JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23174213) Ensembl
MGI		 PMID:23174213 GO_REF:0000107 NCBI chr 2:4,844,627...4,860,562
Ensembl chr 2:4,844,637...4,860,498 		JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMELX amelogenin X-linked involved_in IMP
IBA		 (PMID:21653221) CAFA
GO_Central		 PMID:21653221 GO_REF:0000033 NCBI chr  X:8,055,246...8,063,457
Ensembl chr  X:8,055,782...8,063,449 		JBrowse link
G AMELY amelogenin, Y-linked involved_in IMP
IBA		 (PMID:21653221) CAFA
GO_Central		 PMID:21653221 GO_REF:0000033 NCBI chr  Y:10,124,811...10,132,684
Ensembl chr  Y:10,124,811...10,132,684 		JBrowse link
G CFTR CF transmembrane conductance regulator ISO RGD PMID:31942562 RGD:126928119 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950 		JBrowse link
G CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24339795) Ensembl
MGI		 PMID:24339795 GO_REF:0000107 NCBI chr 3:56,814,823...56,858,460
Ensembl chr 3:56,814,832...56,858,453 		JBrowse link
G FAM20A FAM20A golgi associated secretory pathway pseudokinase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22732358) Ensembl
MGI
GO_Central		 PMID:22732358 GO_REF:0000033 GO_REF:0000107 NCBI chr12:11,606,469...11,663,086
Ensembl chr12:11,607,034...11,657,737 		JBrowse link
G FAM20C FAM20C golgi associated secretory pathway kinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:22732358) GO_Central
MGI		 PMID:22732358 GO_REF:0000033 NCBI chr 3:159,107...200,462
Ensembl chr 3:163,421...200,459 		JBrowse link
G FOXO1 forkhead box O1 ISO RGD PMID:25183529 RGD:10044263 NCBI chr11:15,317,222...15,410,059
Ensembl chr11:15,317,124...15,410,473 		JBrowse link
G ITGB6 integrin subunit beta 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23264742) Ensembl
MGI		 PMID:23264742 GO_REF:0000107 NCBI chr15:67,041,516...67,175,409
Ensembl chr15:67,041,522...67,175,234 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:10742104) MGI PMID:10742104 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18703497) Ensembl
MGI		 PMID:18703497 GO_REF:0000107 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,304 		JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19320717) Ensembl
MGI		 PMID:19320717 GO_REF:0000107 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,741...3,364,239 		JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) MGI PMID:38172607 NCBI chr 3:37,592,982...37,600,004
Ensembl chr 3:37,591,815...37,602,112 		JBrowse link
G STIM1 stromal interaction molecule 1 involved_in ISO (PMID:24621671) UniProt PMID:24621671 NCBI chr 9:6,066,612...6,270,090
Ensembl chr 9:6,066,617...6,270,575 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:19233155) MGI PMID:19233155 NCBI chr14:51,289,376...51,297,110
Ensembl chr14:51,289,321...51,296,725 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23174213) Ensembl
MGI		 PMID:23174213 GO_REF:0000107 NCBI chr 2:4,844,627...4,860,562
Ensembl chr 2:4,844,637...4,860,498 		JBrowse link
G WDR72 WD repeat domain 72 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26247047)
(PMID:25008349)		 Ensembl
MGI		 PMID:25008349 PMID:26247047 GO_REF:0000107 NCBI chr 1:117,946,022...118,161,827
Ensembl chr 1:117,946,048...118,160,286 		JBrowse link
negative regulation of biomineral tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,848,797...78,880,733
Ensembl chr11:78,848,797...78,881,284 		JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:22110751) BHF-UCL PMID:22110751 NCBI chr 4:56,859,640...56,863,807
Ensembl chr 4:56,859,663...56,863,788 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:37,219,887...37,231,321
Ensembl chr 1:37,219,883...37,231,385 		JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,158...6,228,943 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IGI (PMID:26634652) BHF-UCL PMID:26634652 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,989...106,314,944 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IGI (PMID:26634652) BHF-UCL PMID:26634652 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,352,920...125,493,362 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
negative regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHSG alpha 2-HS glycoprotein involved_in ISO
IBA
ISS		 RGD
GO_Central
UniProt		 PMID:8702833 GO_REF:0000024 GO_REF:0000033 RGD:1626074 NCBI chr13:124,426,313...124,438,848
Ensembl chr13:124,426,308...124,438,840 		JBrowse link
G BCOR BCL6 corepressor involved_in ISO (PMID:19578371) UniProt PMID:19578371 NCBI chr  X:35,768,013...35,891,013
Ensembl chr  X:35,768,017...35,814,833 		JBrowse link
G CCL3L1 chemokine (C-C motif) ligand 3-like 1 involved_in ISO (PMID:21403648) UniProt PMID:21403648 NCBI chr12:39,491,999...39,493,345
Ensembl chr12:39,491,914...39,493,774 		JBrowse link
G CCR1 C-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:29,227,218...29,233,862
Ensembl chr13:29,227,222...29,233,960 		JBrowse link
G ECM1 extracellular matrix protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,615,776...98,633,081
Ensembl chr 4:98,615,778...98,621,836 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:22510396), (PMID:25479107), (PMID:30111653) UniProt PMID:22510396 PMID:25479107 PMID:30111653 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G FGF23 fibroblast growth factor 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,028,591...66,038,078
Ensembl chr 5:66,028,776...66,038,740 		JBrowse link
G GATA1 GATA binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15005853) Ensembl
MGI		 PMID:15005853 GO_REF:0000107 NCBI chr  X:42,898,431...42,905,939
Ensembl chr  X:42,898,442...42,905,976 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17181398) Ensembl
MGI		 PMID:17181398 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G LTBP3 latent transforming growth factor beta binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11790802) Ensembl
MGI		 PMID:11790802 GO_REF:0000107 NCBI chr 2:6,701,455...6,720,191
Ensembl chr 2:6,701,510...6,720,153 		JBrowse link
G MEPE matrix extracellular phosphoglycoprotein acts_upstream_of_or_within ISO (PMID:12421822), (PMID:15843468)
(PMID:22766095)		 MGI PMID:12421822 PMID:15843468 PMID:22766095 NCBI chr 8:131,186,563...131,198,418
Ensembl chr 8:131,186,888...131,200,330 		JBrowse link
G NFE2 nuclear factor, erythroid 2 acts_upstream_of_or_within ISO (PMID:15005853) MGI PMID:15005853 NCBI chr 5:19,494,672...19,501,810
Ensembl chr 5:19,494,677...19,501,810 		JBrowse link
G PTK2B protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:11,063,662...11,194,196
Ensembl chr14:11,064,492...11,194,192 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11371614) Ensembl
MGI		 PMID:11371614 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SRGN serglycin involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:72,183,368...72,199,262
Ensembl chr14:72,183,363...72,199,250 		JBrowse link
G TRPM4 transient receptor potential cation channel subfamily M member 4 ISO RGD PMID:23081848 RGD:10003033 NCBI chr 6:54,342,774...54,377,557
Ensembl chr 6:54,342,784...54,377,155 		JBrowse link
negative regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G PTH parathyroid hormone involved_in ISO PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr 2:45,757,398...45,760,433
Ensembl chr 2:45,757,398...45,760,415 		JBrowse link
G RFLNA refilin A involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:28,823,571...28,841,281
Ensembl chr14:28,823,575...28,845,719 		JBrowse link
G RFLNB refilin B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:24436304) Ensembl
MGI
GO_Central		 PMID:24436304 GO_REF:0000033 GO_REF:0000107 NCBI chr12:47,307,657...47,316,652
Ensembl chr12:47,307,637...47,314,589 		JBrowse link
negative regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPN asporin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:42,165,553...42,192,902
Ensembl chr 3:42,165,561...42,192,813 		JBrowse link
G BCOR BCL6 corepressor involved_in ISO (PMID:19578371) UniProt PMID:19578371 NCBI chr  X:35,768,013...35,891,013
Ensembl chr  X:35,768,017...35,814,833 		JBrowse link
otolith mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:9668038) MGI PMID:9668038 NCBI chr13:66,526,508...66,897,125
Ensembl chr13:66,528,323...66,897,128 		JBrowse link
G OC90 otoconin 90 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:9,028,483...9,054,503
Ensembl chr 4:9,018,994...9,053,372 		JBrowse link
G OTOL1 otolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:101,140,167...101,193,710
Ensembl chr13:101,134,663...101,194,230 		JBrowse link
otolith mineralization completed early in development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG4B autophagy related 4B cysteine peptidase involved_in ISO (PMID:20577052) UniProt PMID:20577052 NCBI chr15:140,223,903...140,245,590
Ensembl chr15:140,223,904...140,246,321 		JBrowse link
positive regulation of biomineral tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMTN amelotin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:67,312,108...67,327,775
Ensembl chr 8:67,312,972...67,326,730 		JBrowse link
G ATF4 activating transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27812542) Ensembl
MGI		 PMID:27812542 GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,742,967...8,745,368 		JBrowse link
G CEBPB CCAAT enhancer binding protein beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27812542) MGI
Ensembl		 PMID:27812542 GO_REF:0000107 NCBI chr17:51,722,633...51,723,673
Ensembl chr17:51,722,426...51,724,305 		JBrowse link
G FBXO5 F-box protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,466,961...13,478,496
Ensembl chr 1:13,467,501...13,505,928 		JBrowse link
G ODAPH odontogenesis associated phosphoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:71,215,091...71,225,787
Ensembl chr 8:71,215,152...71,226,319 		JBrowse link
positive regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,750,796...64,891,544 		JBrowse link
G ACVR2A activin A receptor type 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,177,333...4,259,056
Ensembl chr15:4,173,805...4,259,706 		JBrowse link
G ACVR2B activin A receptor type 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,237,699...23,276,086
Ensembl chr13:23,237,699...23,267,373 		JBrowse link
G ADGRV1 adhesion G protein-coupled receptor V1 involved_in ISO (PMID:22419726) UniProt PMID:22419726 NCBI chr 2:97,703,648...98,277,847
Ensembl chr 2:97,735,053...98,275,748 		JBrowse link
G ADRB2 adrenoceptor beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15724149) Ensembl
MGI		 PMID:15724149 GO_REF:0000107 NCBI chr 2:150,032,649...150,035,591
Ensembl chr 2:150,033,579...150,040,731 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:90,859,209...90,907,084
Ensembl chr14:90,859,019...90,907,090 		JBrowse link
G ANO6 anoctamin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,112,428...76,337,073
Ensembl chr 5:76,113,212...76,356,544 		JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:92,935,688...93,061,406
Ensembl chr 5:92,935,694...93,061,405 		JBrowse link
G ATRAID all-trans retinoic acid induced differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:111,914,710...111,919,766
Ensembl chr 3:111,914,708...111,919,946 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:14749725) RGD
Ensembl
MGI		 PMID:14749725 PMID:15352071 GO_REF:0000107 RGD:9068399 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,210,270 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,790 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:130,392,404...130,395,179
Ensembl chr 4:130,392,407...130,395,150 		JBrowse link
G CD276 CD276 molecule acts_upstream_of_or_within ISO (PMID:15317945) MGI PMID:15317945 NCBI chr 7:59,703,283...59,733,910
Ensembl chr 7:59,703,289...59,733,777 		JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO RGD PMID:18434589 RGD:151665814 NCBI chr 2:151,102,138...151,130,311
Ensembl chr 2:151,102,147...151,147,633 		JBrowse link
G FAM20C FAM20C golgi associated secretory pathway kinase acts_upstream_of_or_within ISO (PMID:17369251), (PMID:22615579) MGI PMID:17369251 PMID:22615579 NCBI chr 3:159,107...200,462
Ensembl chr 3:163,421...200,459 		JBrowse link
G FBN2 fibrillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:131,150,665...131,370,241
Ensembl chr 2:131,150,667...131,370,466 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:20053668) MGI PMID:20053668 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964 		JBrowse link
G FZD9 frizzled class receptor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,753,294...10,762,812
Ensembl chr 3:10,754,783...10,757,147 		JBrowse link
G GPM6B glycoprotein M6B involved_in ISO (PMID:21638316) UniProt PMID:21638316 NCBI chr  X:10,429,496...10,582,768
Ensembl chr  X:10,430,301...10,582,354 		JBrowse link
G ISG15 ISG15 ubiquitin like modifier involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,363,201...63,364,211
Ensembl chr 6:63,363,173...63,364,208 		JBrowse link
G KL klotho involved_in ISO (PMID:12110410) UniProt PMID:12110410 NCBI chr11:9,427,236...9,479,251
Ensembl chr11:9,427,037...9,479,228 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,124,168...96,296,810 		JBrowse link
G MIA3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO (PMID:21606205) MGI PMID:21606205 NCBI chr10:11,362,489...11,428,844
Ensembl chr10:11,377,846...11,429,015 		JBrowse link
G NELL1 neural EGFL like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:37,809,080...38,754,520
Ensembl chr 2:37,809,008...38,754,525 		JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,368,471...118,765,107
Ensembl chr 3:118,757,920...118,765,102 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G P2RX7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12677010), (PMID:18519738) Ensembl
MGI		 PMID:12677010 PMID:18519738 GO_REF:0000107 NCBI chr14:31,415,188...31,476,502
Ensembl chr14:31,415,193...31,476,472 		JBrowse link
G PKDCC protein kinase domain containing, cytoplasmic involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:98,258,456...98,268,539
Ensembl chr 3:98,258,463...98,268,553 		JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:10807497 RGD:1642474 NCBI chr 9:127,853,581...128,164,825
Ensembl chr 9:127,859,051...128,162,638 		JBrowse link
G PTH parathyroid hormone involved_in ISO
IEA		 RGD
Ensembl		 PMID:15758479 PMID:22445539 GO_REF:0000107 RGD:7207452 RGD:7242906 NCBI chr 2:45,757,398...45,760,433
Ensembl chr 2:45,757,398...45,760,415 		JBrowse link
G PTN pleiotrophin involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,787...12,309,044 		JBrowse link
G SLC20A2 solute carrier family 20 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,435,435...11,549,623
Ensembl chr17:11,435,442...11,486,581 		JBrowse link
G SLC8A1 solute carrier family 8 member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:99,823,503...100,257,306
Ensembl chr 3:99,897,162...100,244,759 		JBrowse link
G SMAD3 SMAD family member 3 ISO rat gene expressed in mouse osteoblastic cell line MC3T3-E1; TGF-beta down-regulates this activity RGD PMID:12096832 RGD:727387 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G TENT5A terminal nucleotidyltransferase 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:84,545,033...84,552,138
Ensembl chr 1:84,545,202...84,552,134 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TMEM119 transmembrane protein 119 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:42,190,958...42,197,384 JBrowse link
G WNT10B Wnt family member 10B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728361) Ensembl
MGI		 PMID:15728361 GO_REF:0000107 NCBI chr 5:14,997,377...15,013,928
Ensembl chr 5:14,997,381...15,003,567 		JBrowse link
G WNT4 Wnt family member 4 involved_in ISO (PMID:17720811) BHF-UCL PMID:17720811 NCBI chr 6:80,110,238...80,138,165 JBrowse link
positive regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,860,386...5,873,779
Ensembl chr 2:5,860,391...5,874,124 		JBrowse link
G ASXL2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO (PMID:21490954) MGI PMID:21490954 NCBI chr 3:113,044,788...113,184,809
Ensembl chr 3:113,044,836...113,180,742 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G LTF lactotransferrin involved_in ISS UniProt GO_REF:0000024 NCBI chr13:29,413,886...29,445,751
Ensembl chr13:29,413,886...29,445,739 		JBrowse link
positive regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMTN amelotin involved_in IEA
IBA		 Ensembl
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:67,312,108...67,327,775
Ensembl chr 8:67,312,972...67,326,730 		JBrowse link
G CFTR CF transmembrane conductance regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950 		JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16014627) MGI PMID:16014627 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761 		JBrowse link
G ENAM enamelin involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:24603688) GO_Central
MGI		 PMID:24603688 GO_REF:0000033 NCBI chr 8:67,416,482...67,431,196
Ensembl chr 8:67,416,469...67,433,086 		JBrowse link
G ODAPH odontogenesis associated phosphoprotein involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:71,215,091...71,225,787
Ensembl chr 8:71,215,152...71,226,319 		JBrowse link
G SLC4A2 solute carrier family 4 member 2 involved_in ISO (PMID:26403673) ARUK-UCL PMID:26403673 NCBI chr18:6,149,459...6,166,622
Ensembl chr18:6,149,459...6,165,212 		JBrowse link
positive regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G WNT6 Wnt family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:120,901,471...120,917,359
Ensembl chr15:120,901,376...120,917,486 		JBrowse link
regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKH ANKH inorganic pyrophosphate transport regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10894769), (PMID:7276519) Ensembl
MGI		 PMID:7276519 PMID:10894769 GO_REF:0000107 NCBI chr16:4,095,582...4,271,073
Ensembl chr16:4,105,165...4,271,170 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:93,807,703...93,808,806
Ensembl chr 4:93,807,706...93,808,968 		JBrowse link
G BMP2K BMP2 inducible kinase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11500515) Ensembl
MGI
GO_Central		 PMID:11500515 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:138,671,240...138,789,966
Ensembl chr 8:138,674,823...138,790,083 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21350216) Ensembl
MGI		 PMID:21350216 GO_REF:0000107 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:23,053,129...23,058,865
Ensembl chr 5:23,053,892...23,058,470 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:87,749,738...87,911,818
Ensembl chr 4:87,756,168...87,911,296 		JBrowse link
G ECM1 extracellular matrix protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:20138147) Ensembl
MGI
GO_Central		 PMID:20138147 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:98,615,776...98,633,081
Ensembl chr 4:98,615,778...98,621,836 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G FGF23 fibroblast growth factor 23 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15579309) Ensembl
MGI		 PMID:15579309 GO_REF:0000107 NCBI chr 5:66,028,591...66,038,078
Ensembl chr 5:66,028,776...66,038,740 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21346198) Ensembl
MGI		 PMID:21346198 GO_REF:0000107 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,528...41,002,156 		JBrowse link
G MATN1 matrilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16877353) Ensembl
MGI		 PMID:16877353 GO_REF:0000107 NCBI chr 6:87,342,030...87,351,483
Ensembl chr 6:87,341,472...87,351,501 		JBrowse link
G MGP matrix Gla protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:57,665,272...57,669,360
Ensembl chr 5:57,665,248...57,669,764 		JBrowse link
G NBR1 NBR1 autophagy cargo receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:19,755,733...19,789,014
Ensembl chr12:19,755,738...19,788,960 		JBrowse link
G NOTUM notum, palmitoleoyl-protein carboxylesterase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:30622831) MGI
Ensembl		 PMID:30622831 GO_REF:0000107 NCBI chr12:1,033,814...1,044,412
Ensembl chr12:1,036,488...1,044,397 		JBrowse link
G S1PR1 sphingosine-1-phosphate receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:117,064,632...117,069,724
Ensembl chr 4:117,064,755...117,069,650 		JBrowse link
G SGMS2 sphingomyelin synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:114,052,726...114,145,946
Ensembl chr 8:114,057,603...114,076,154 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:23695662) MGI PMID:23695662 NCBI chr  X:42,797,309...42,811,457
Ensembl chr  X:42,797,828...42,811,461 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
G TXLNG taxilin gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:13,229,680...13,292,371
Ensembl chr  X:13,229,754...13,290,147 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23695662) Ensembl
MGI		 PMID:23695662 GO_REF:0000107 NCBI chr 6:96,008,307...96,057,131
Ensembl chr 6:96,008,455...96,062,951 		JBrowse link
regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:20102707) MGI PMID:20102707 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224 		JBrowse link
G DMP1 dentin matrix acidic phosphoprotein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16014627) Ensembl
MGI		 PMID:16014627 GO_REF:0000107 NCBI chr 8:131,285,238...131,319,398
Ensembl chr 8:131,285,330...131,313,130 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:30243146), (PMID:31336344) MGI
Ensembl		 PMID:30243146 PMID:31336344 GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMELX amelogenin X-linked involved_in ISO (PMID:1483698)
(PMID:11406633)		 BHF-UCL PMID:1483698 PMID:11406633 NCBI chr  X:8,055,246...8,063,457
Ensembl chr  X:8,055,782...8,063,449 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29533727) MGI PMID:29533727 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G TSPEAR thrombospondin type laminin G domain and EAR repeats involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:207,285,878...207,412,523
Ensembl chr13:207,285,886...207,412,511 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18929
    developmental process 6754
      anatomical structure development 6338
        animal organ development 3516
          biomineral tissue development 187
            bone mineralization + 140
            chitin-based cuticle sclerotization by biomineralization 0
            negative regulation of biomineral tissue development + 29
            otolith mineralization + 4
            positive regulation of biomineral tissue development + 57
            regulation of biomineral tissue development + 104
            shell calcification + 0
            tooth mineralization + 37
paths to the root