ANO6 (anoctamin 6) - Rat Genome Database

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Gene: ANO6 (anoctamin 6) Sus scrofa
Analyze
Symbol: ANO6
Name: anoctamin 6
RGD ID: 14146244
Description: ENCODES a protein that exhibits identical protein binding (ortholog); intracellular calcium activated chloride channel activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone mineralization involved in bone maturation (ortholog); calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); Experimental Liver Cirrhosis (ortholog); inflammatory bowel disease (ortholog); FOUND IN integral component of plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: anoctamin-6; Transmembrane protein 16F
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl576,113,243 - 76,337,073 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1576,112,428 - 76,337,073 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2578,998,214 - 79,219,973 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:14681463  


Genomics

Comparative Map Data
ANO6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl576,113,243 - 76,337,073 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1576,112,428 - 76,337,073 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2578,998,214 - 79,219,973 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANO6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1245,215,987 - 45,482,280 (+)EnsemblGRCh38hg38GRCh38
GRCh381245,216,033 - 45,440,404 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371245,609,878 - 45,834,187 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361243,896,170 - 44,112,399 (+)NCBINCBI36hg18NCBI36
Celera1244,413,462 - 44,637,876 (+)NCBI
Cytogenetic Map12q12NCBI
HuRef1242,638,190 - 42,862,629 (+)NCBIHuRef
CHM1_11245,574,740 - 45,799,189 (+)NCBICHM1_1
Ano6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391595,688,724 - 95,873,353 (+)NCBIGRCm39mm39
GRCm39 Ensembl1595,688,724 - 95,872,632 (+)Ensembl
GRCm381595,790,843 - 95,975,472 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1595,790,843 - 95,974,751 (+)EnsemblGRCm38mm10GRCm38
MGSCv371595,621,274 - 95,805,205 (+)NCBIGRCm37mm9NCBIm37
MGSCv361595,618,877 - 95,802,808 (+)NCBImm8
Celera1597,939,179 - 98,118,870 (+)NCBICelera
Cytogenetic Map15E3- F1NCBI
Ano6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.27126,933,629 - 127,113,589 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl7126,933,936 - 127,113,589 (+)Ensembl
Rnor_6.07137,142,063 - 137,335,208 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7137,142,170 - 137,335,208 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07136,781,570 - 136,973,259 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47134,434,775 - 134,624,126 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17134,511,298 - 134,697,841 (+)NCBI
Celera7123,442,149 - 123,619,990 (+)NCBICelera
Cytogenetic Map7q35NCBI
Ano6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555004,462,524 - 4,652,782 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555004,462,314 - 4,652,634 (+)NCBIChiLan1.0ChiLan1.0
ANO6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11244,164,375 - 44,380,261 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1244,164,375 - 44,303,259 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01243,295,928 - 43,512,073 (-)NCBIMhudiblu_PPA_v0panPan3
ANO6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1278,882,691 - 9,067,057 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl278,884,062 - 9,066,934 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2737,246,426 - 37,430,774 (+)NCBI
ROS_Cfam_1.0279,072,368 - 9,257,318 (-)NCBI
UMICH_Zoey_3.1278,878,877 - 9,063,444 (-)NCBI
UNSW_CanFamBas_1.0278,918,866 - 9,103,666 (-)NCBI
UU_Cfam_GSD_1.02737,484,107 - 37,668,815 (+)NCBI
Ano6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494569,429,550 - 69,515,718 (-)NCBI
SpeTri2.0NW_0049365123,649,103 - 3,736,274 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANO6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11141,420,206 - 41,633,323 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1141,419,901 - 41,633,347 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037204,821,696 - 205,033,977 (-)NCBIVero_WHO_p1.0
Ano6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248166,896,176 - 7,077,758 (-)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 8 2 3 5 2 3 2 3 3
Low 2 2 20
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000000873   ⟹   ENSSSCP00000000856
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl576,113,539 - 76,334,024 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000045644   ⟹   ENSSSCP00000040479
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl576,113,243 - 76,334,024 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000077680   ⟹   ENSSSCP00000062517
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl576,241,854 - 76,337,073 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000084586   ⟹   ENSSSCP00000064125
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl576,239,991 - 76,337,073 (+)Ensembl
RefSeq Acc Id: XM_005655713   ⟹   XP_005655770
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1576,112,428 - 76,337,073 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005655770 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005655770   ⟸   XM_005655713
- Sequence:
RefSeq Acc Id: ENSSSCP00000000856   ⟸   ENSSSCT00000000873
RefSeq Acc Id: ENSSSCP00000064125   ⟸   ENSSSCT00000084586
RefSeq Acc Id: ENSSSCP00000040479   ⟸   ENSSSCT00000045644
RefSeq Acc Id: ENSSSCP00000062517   ⟸   ENSSSCT00000077680
Protein Domains
Anoct_dimer


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000000804 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000000856 UniProtKB/TrEMBL
  ENSSSCP00000040479 UniProtKB/TrEMBL
  ENSSSCP00000062517 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000064125 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000000873 UniProtKB/TrEMBL
  ENSSSCT00000045644 UniProtKB/TrEMBL
  ENSSSCT00000077680 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000084586 UniProtKB/TrEMBL
InterPro Anoct_dimer UniProtKB/TrEMBL
  Anoctamin UniProtKB/TrEMBL
  Anoctamin-6 UniProtKB/TrEMBL
NCBI Gene ANO6 ENTREZGENE
PANTHER PTHR12308 UniProtKB/TrEMBL
  PTHR12308:SF21 UniProtKB/TrEMBL
Pfam Anoct_dimer UniProtKB/TrEMBL
  Anoctamin UniProtKB/TrEMBL
UniProt A0A287A905_PIG UniProtKB/TrEMBL
  A0A5G2QI83_PIG UniProtKB/TrEMBL
  A0A5G2QKC6_PIG UniProtKB/TrEMBL
  F1SGY1_PIG UniProtKB/TrEMBL
VGNC ID VGNC:85359 ENTREZGENE