DICER1 (dicer 1, ribonuclease III) - Rat Genome Database

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Gene: DICER1 (dicer 1, ribonuclease III) Sus scrofa
Analyze
Symbol: DICER1
Name: dicer 1, ribonuclease III
RGD ID: 14047912
Description: ENCODES a protein that exhibits miRNA binding (ortholog); pre-miRNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cardiac muscle cell development (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 103 (ortholog); autosomal recessive nonsyndromic deafness 111 (ortholog); breast cancer (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); INTERACTS WITH 3,3',5,5'-tetrabromobisphenol A; bisphenol A; Tetrachlorobisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: dicer 1, ribonuclease type III; endoribonuclease Dicer
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7116,365,802 - 116,411,224 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17116,361,630 - 116,436,471 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27123,581,725 - 123,652,553 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (ISO)
apoptotic DNA fragmentation  (IEA)
branching morphogenesis of an epithelial tube  (ISO)
cardiac muscle cell development  (ISO)
cardiac neural crest cell development involved in outflow tract morphogenesis  (ISO)
cartilage development  (ISO)
cell population proliferation  (ISO)
cellular component organization  (IEA)
cellular response to glucose stimulus  (ISO)
cellular response to hydrogen peroxide  (ISO)
cellular response to hypoxia  (ISO)
cellular response to tumor necrosis factor  (ISO)
cerebral cortex development  (ISO)
defense response to virus  (ISO)
digestive tract development  (ISO)
embryonic hindlimb morphogenesis  (ISO)
embryonic limb morphogenesis  (ISO)
epidermis morphogenesis  (ISO)
ganglion development  (ISO)
gene expression  (ISO)
global gene silencing by mRNA cleavage  (IEA)
hair follicle cell proliferation  (ISO)
hair follicle development  (ISO)
hair follicle morphogenesis  (ISO)
inner ear receptor cell development  (ISO)
intestinal epithelial cell development  (ISO)
lung development  (ISO)
meiotic spindle organization  (ISO)
miRNA processing  (IEA,ISO)
mRNA stabilization  (ISO)
multicellular organism growth  (ISO)
myoblast differentiation involved in skeletal muscle regeneration  (ISO)
negative regulation of gene expression  (IEA,ISO)
negative regulation of glial cell proliferation  (ISO)
negative regulation of Schwann cell proliferation  (ISO)
negative regulation of transcription by RNA polymerase II  (ISO)
negative regulation of tumor necrosis factor production  (IEA,ISO)
negative regulation of tumor necrosis factor-mediated signaling pathway  (IEA,ISO)
nerve development  (ISO)
neuron projection morphogenesis  (ISO)
olfactory bulb interneuron differentiation  (ISO)
pericentric heterochromatin formation  (ISO)
peripheral nervous system myelin formation  (ISO)
positive regulation of collagen biosynthetic process  (ISO)
positive regulation of endothelial cell migration  (ISO)
positive regulation of endothelial cell-matrix adhesion via fibronectin  (ISO)
positive regulation of establishment of endothelial barrier  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of hepatic stellate cell proliferation  (ISO)
positive regulation of miRNA metabolic process  (ISO)
positive regulation of myelination  (ISO)
positive regulation of Schwann cell differentiation  (ISO)
positive regulation of transcription by RNA polymerase II  (ISO)
positive regulation of vascular endothelial cell proliferation  (ISO)
post-embryonic development  (ISO)
pre-miRNA processing  (IEA,ISO)
regulation of cell cycle  (ISO)
regulation of enamel mineralization  (ISO)
regulation of epithelial cell differentiation  (ISO)
regulation of gene expression  (ISO)
regulation of inflammatory response  (ISO)
regulation of miRNA metabolic process  (ISO)
regulation of muscle cell apoptotic process  (ISO)
regulation of myelination  (ISO)
regulation of neurogenesis  (ISO)
regulation of neuron differentiation  (ISO)
regulation of odontogenesis of dentin-containing tooth  (ISO)
regulation of oligodendrocyte differentiation  (ISO)
regulation of protein phosphorylation  (ISO)
regulation of regulatory T cell differentiation  (ISO)
regulation of RNA metabolic process  (ISO)
regulation of stem cell differentiation  (ISO)
regulation of viral genome replication  (ISO)
regulatory ncRNA-mediated gene silencing  (IEA)
regulatory ncRNA-mediated post-transcriptional gene silencing  (ISO)
reproductive structure development  (ISO)
RISC complex assembly  (IEA)
RNA processing  (IEA,ISO)
siRNA processing  (IEA,ISO)
spermatogonial cell division  (ISO)
spinal cord motor neuron differentiation  (ISO)
spindle assembly  (ISO)
spleen development  (ISO)
stem cell population maintenance  (ISO)
trophectodermal cell proliferation  (ISO)
zygote asymmetric cell division  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:22498362   PMID:26433267   PMID:30032202  


Genomics

Comparative Map Data
DICER1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7116,365,802 - 116,411,224 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17116,361,630 - 116,436,471 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27123,581,725 - 123,652,553 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DICER1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381495,086,228 - 95,158,010 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1495,086,228 - 95,158,010 (-)EnsemblGRCh38hg38GRCh38
GRCh371495,552,565 - 95,624,347 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361494,622,319 - 94,693,512 (-)NCBINCBI36Build 36hg18NCBI36
Build 341494,622,318 - 94,693,512NCBI
Celera1475,608,684 - 75,679,876 (-)NCBICelera
Cytogenetic Map14q32.13NCBI
HuRef1475,736,521 - 75,807,615 (-)NCBIHuRef
CHM1_11495,490,915 - 95,561,989 (-)NCBICHM1_1
T2T-CHM13v2.01489,316,445 - 89,388,228 (-)NCBIT2T-CHM13v2.0
Dicer1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912104,654,001 - 104,718,331 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12104,654,001 - 104,718,211 (-)EnsemblGRCm39 Ensembl
GRCm3812104,687,740 - 104,751,968 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12104,687,742 - 104,751,952 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712105,925,952 - 105,990,162 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612105,092,486 - 105,153,002 (-)NCBIMGSCv36mm8
Celera12105,918,245 - 105,982,441 (-)NCBICelera
Cytogenetic Map12ENCBI
cM Map1254.83NCBI
Dicer1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86129,392,298 - 129,457,252 (-)NCBIGRCr8
mRatBN7.26123,627,529 - 123,692,278 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6123,631,250 - 123,693,965 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.06128,388,084 - 128,453,234 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6128,388,053 - 128,434,183 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06137,586,335 - 137,633,706 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46128,777,468 - 128,838,780 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16128,781,378 - 128,842,495 (-)NCBI
Celera6121,106,680 - 121,167,957 (-)NCBICelera
Cytogenetic Map6q32NCBI
Dicer1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543817,382,493 - 17,431,797 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543817,374,899 - 17,431,599 (+)NCBIChiLan1.0ChiLan1.0
DICER1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21596,234,748 - 96,307,196 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11495,451,254 - 95,523,061 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01475,709,029 - 75,780,779 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11495,036,385 - 95,107,940 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1495,036,385 - 95,107,940 (-)Ensemblpanpan1.1panPan2
DICER1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1863,970,245 - 64,029,438 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl863,972,027 - 64,019,879 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha863,546,706 - 63,619,316 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0864,236,992 - 64,309,618 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl864,238,043 - 64,309,589 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1863,912,041 - 63,984,637 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0863,970,646 - 64,043,228 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0864,295,524 - 64,368,151 (-)NCBIUU_Cfam_GSD_1.0
Dicer1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864010,443,874 - 10,504,962 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936846532,972 - 575,689 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936846528,768 - 584,599 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DICER1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12472,915,550 - 72,986,658 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2472,915,499 - 72,963,006 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605360,107,379 - 60,178,341 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dicer1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247347,608,273 - 7,651,819 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247347,604,049 - 7,681,481 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in DICER1
2833 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2 2 3 5 2 16 2 3 3
Low 8 2 7
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001197194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013989222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_013989223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021098183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK350610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK350823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK398572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01075229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ184403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSSCT00000022914   ⟹   ENSSSCP00000019791
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl7116,361,639 - 116,436,318 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000038351   ⟹   ENSSSCP00000035303
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl7116,365,802 - 116,411,224 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000039889   ⟹   ENSSSCP00000038025
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl7116,361,630 - 116,436,304 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000049913   ⟹   ENSSSCP00000044594
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl7116,361,641 - 116,436,338 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000050852   ⟹   ENSSSCP00000034079
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl7116,365,802 - 116,411,224 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000059204   ⟹   ENSSSCP00000058194
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl7116,361,635 - 116,436,519 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000082343   ⟹   ENSSSCP00000072051
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl7116,361,633 - 116,436,371 (-)Ensembl
RefSeq Acc Id: NM_001197194   ⟹   NP_001184123
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,365,740 - 116,408,546 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013989222   ⟹   XP_013844676
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,639 - 116,436,455 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013989223   ⟹   XP_013844677
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,639 - 116,436,344 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098166   ⟹   XP_020953825
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,344 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098167   ⟹   XP_020953826
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098168   ⟹   XP_020953827
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098170   ⟹   XP_020953829
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098171   ⟹   XP_020953830
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098172   ⟹   XP_020953831
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,403 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098173   ⟹   XP_020953832
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,403 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098174   ⟹   XP_020953833
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098175   ⟹   XP_020953834
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,361 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098176   ⟹   XP_020953835
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098177   ⟹   XP_020953836
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,403 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098178   ⟹   XP_020953837
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,630 - 116,436,420 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098180   ⟹   XP_020953839
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,639 - 116,436,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098181   ⟹   XP_020953840
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,639 - 116,436,403 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098182   ⟹   XP_020953841
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,639 - 116,436,403 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021098183   ⟹   XP_020953842
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17116,361,639 - 116,436,471 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001184123 (Get FASTA)   NCBI Sequence Viewer  
  XP_013844676 (Get FASTA)   NCBI Sequence Viewer  
  XP_013844677 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953825 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953826 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953827 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953829 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953830 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953831 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953832 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953833 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953834 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953835 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953836 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953837 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953839 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953840 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953841 (Get FASTA)   NCBI Sequence Viewer  
  XP_020953842 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ADN88174 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000034079.2
  ENSSSCP00000035303
  ENSSSCP00000035303.1
  ENSSSCP00005021989.1
  ENSSSCP00005022024.1
  ENSSSCP00005022052.1
  ENSSSCP00015018472.1
  ENSSSCP00015018578.1
  ENSSSCP00015018635.1
  ENSSSCP00015018788.1
  ENSSSCP00025045797.1
  ENSSSCP00025045866.1
  ENSSSCP00025045920.1
  ENSSSCP00025045984.1
  ENSSSCP00025046046.1
  ENSSSCP00035012319.1
  ENSSSCP00035012347.1
  ENSSSCP00035012386.1
  ENSSSCP00040038002.1
  ENSSSCP00040038104.1
  ENSSSCP00040038257.1
  ENSSSCP00040038445.1
  ENSSSCP00040038565.1
  ENSSSCP00050012510.1
  ENSSSCP00050012572.1
  ENSSSCP00050012611.1
  ENSSSCP00055048042.1
  ENSSSCP00055048051.1
  ENSSSCP00055048065.1
  ENSSSCP00055048085.1
  ENSSSCP00055048093.1
  ENSSSCP00065038888.1
  ENSSSCP00065038890.1
  ENSSSCP00065038898.1
  ENSSSCP00070000853.1
  ENSSSCP00070000858.1
  ENSSSCP00070000869.1
  ENSSSCP00070000874.1
  ENSSSCP00070000877.1
  ENSSSCP00070000884.1
  ENSSSCP00070000901.1
  ENSSSCP00070000924.1
RefSeq Acc Id: XP_020953837   ⟸   XM_021098178
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953836   ⟸   XM_021098177
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953832   ⟸   XM_021098173
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953831   ⟸   XM_021098172
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953834   ⟸   XM_021098175
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953825   ⟸   XM_021098166
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953833   ⟸   XM_021098174
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953826   ⟸   XM_021098167
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953827   ⟸   XM_021098168
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953835   ⟸   XM_021098176
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953829   ⟸   XM_021098170
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953830   ⟸   XM_021098171
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SFI0 (UniProtKB/TrEMBL),   A0A8D1CQ91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953842   ⟸   XM_021098183
- Peptide Label: isoform X2
- UniProtKB: A0A286ZUG4 (UniProtKB/TrEMBL),   A0A4X1SFG5 (UniProtKB/TrEMBL),   A0A8D1FLS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013844676   ⟸   XM_013989222
- Peptide Label: isoform X2
- UniProtKB: A0A286ZUG4 (UniProtKB/TrEMBL),   A0A4X1SFG5 (UniProtKB/TrEMBL),   A0A8D1FLS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953840   ⟸   XM_021098181
- Peptide Label: isoform X2
- UniProtKB: A0A286ZUG4 (UniProtKB/TrEMBL),   A0A4X1SFG5 (UniProtKB/TrEMBL),   A0A8D1FLS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953841   ⟸   XM_021098182
- Peptide Label: isoform X2
- UniProtKB: A0A286ZUG4 (UniProtKB/TrEMBL),   A0A4X1SFG5 (UniProtKB/TrEMBL),   A0A8D1FLS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013844677   ⟸   XM_013989223
- Peptide Label: isoform X2
- UniProtKB: A0A286ZUG4 (UniProtKB/TrEMBL),   A0A4X1SFG5 (UniProtKB/TrEMBL),   A0A8D1FLS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020953839   ⟸   XM_021098180
- Peptide Label: isoform X2
- UniProtKB: A0A286ZUG4 (UniProtKB/TrEMBL),   A0A4X1SFG5 (UniProtKB/TrEMBL),   A0A8D1FLS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001184123   ⟸   NM_001197194
- UniProtKB: E2JE26 (UniProtKB/TrEMBL),   A0A8D1FLS7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000038025   ⟸   ENSSSCT00000039889
RefSeq Acc Id: ENSSSCP00000034079   ⟸   ENSSSCT00000050852
RefSeq Acc Id: ENSSSCP00000058194   ⟸   ENSSSCT00000059204
RefSeq Acc Id: ENSSSCP00000044594   ⟸   ENSSSCT00000049913
RefSeq Acc Id: ENSSSCP00000019791   ⟸   ENSSSCT00000022914
RefSeq Acc Id: ENSSSCP00000035303   ⟸   ENSSSCT00000038351
RefSeq Acc Id: ENSSSCP00000072051   ⟸   ENSSSCT00000082343

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000028225 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005021839 UniProtKB/TrEMBL
  ENSSSCG00015035142 UniProtKB/TrEMBL
  ENSSSCG00025074920 UniProtKB/TrEMBL
  ENSSSCG00035023960 UniProtKB/TrEMBL
  ENSSSCG00040061719 UniProtKB/TrEMBL
  ENSSSCG00050022316 UniProtKB/TrEMBL
  ENSSSCG00055030140 UniProtKB/TrEMBL
  ENSSSCG00065064724 UniProtKB/TrEMBL
  ENSSSCG00070000362 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000038351 ENTREZGENE
  ENSSSCT00000038351.3 UniProtKB/TrEMBL
  ENSSSCT00000050852.3 UniProtKB/TrEMBL
  ENSSSCT00005036077.1 UniProtKB/TrEMBL
  ENSSSCT00005036124.1 UniProtKB/TrEMBL
  ENSSSCT00005036157.1 UniProtKB/TrEMBL
  ENSSSCT00015046734.1 UniProtKB/TrEMBL
  ENSSSCT00015046989.1 UniProtKB/TrEMBL
  ENSSSCT00015047134.1 UniProtKB/TrEMBL
  ENSSSCT00015047458.1 UniProtKB/TrEMBL
  ENSSSCT00025103351.1 UniProtKB/TrEMBL
  ENSSSCT00025103509.1 UniProtKB/TrEMBL
  ENSSSCT00025103628.1 UniProtKB/TrEMBL
  ENSSSCT00025103726.1 UniProtKB/TrEMBL
  ENSSSCT00025103826.1 UniProtKB/TrEMBL
  ENSSSCT00035031449.1 UniProtKB/TrEMBL
  ENSSSCT00035031522.1 UniProtKB/TrEMBL
  ENSSSCT00035031608.1 UniProtKB/TrEMBL
  ENSSSCT00040086633.1 UniProtKB/TrEMBL
  ENSSSCT00040086825.1 UniProtKB/TrEMBL
  ENSSSCT00040087124.1 UniProtKB/TrEMBL
  ENSSSCT00040087508.1 UniProtKB/TrEMBL
  ENSSSCT00040087767.1 UniProtKB/TrEMBL
  ENSSSCT00050030094.1 UniProtKB/TrEMBL
  ENSSSCT00050030204.1 UniProtKB/TrEMBL
  ENSSSCT00050030279.1 UniProtKB/TrEMBL
  ENSSSCT00055059959.1 UniProtKB/TrEMBL
  ENSSSCT00055059972.1 UniProtKB/TrEMBL
  ENSSSCT00055059987.1 UniProtKB/TrEMBL
  ENSSSCT00055060009.1 UniProtKB/TrEMBL
  ENSSSCT00055060017.1 UniProtKB/TrEMBL
  ENSSSCT00065088920.1 UniProtKB/TrEMBL
  ENSSSCT00065088929.1 UniProtKB/TrEMBL
  ENSSSCT00065088944.1 UniProtKB/TrEMBL
  ENSSSCT00070000976.1 UniProtKB/TrEMBL
  ENSSSCT00070000981.1 UniProtKB/TrEMBL
  ENSSSCT00070000992.1 UniProtKB/TrEMBL
  ENSSSCT00070000997.1 UniProtKB/TrEMBL
  ENSSSCT00070001000.1 UniProtKB/TrEMBL
  ENSSSCT00070001007.1 UniProtKB/TrEMBL
  ENSSSCT00070001026.1 UniProtKB/TrEMBL
  ENSSSCT00070001052.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1520.10 UniProtKB/TrEMBL
  3.30.160.20 UniProtKB/TrEMBL
  3.30.160.380 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  paz domain UniProtKB/TrEMBL
InterPro DEAD/DEAH_box_helicase_dom UniProtKB/TrEMBL
  Dicer_dimer_sf UniProtKB/TrEMBL
  Dicer_dimerisation_dom UniProtKB/TrEMBL
  DICER_DSRM UniProtKB/TrEMBL
  Dicer_PBD UniProtKB/TrEMBL
  Dicer_platform UniProtKB/TrEMBL
  dsRBD_dom UniProtKB/TrEMBL
  Helicase_ATP-bd UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  PAZ_dom UniProtKB/TrEMBL
  PAZ_dom_sf UniProtKB/TrEMBL
  RNase_III_dom UniProtKB/TrEMBL
  RNase_III_sf UniProtKB/TrEMBL
KEGG Report ssc:100505387 UniProtKB/TrEMBL
NCBI Gene DICER1 ENTREZGENE
PANTHER DICER-RELATED UniProtKB/TrEMBL
  ENDORIBONUCLEASE DICER UniProtKB/TrEMBL
Pfam DEAD UniProtKB/TrEMBL
  Dicer_dimer UniProtKB/TrEMBL
  Dicer_dsRBD UniProtKB/TrEMBL
  Dicer_PBD UniProtKB/TrEMBL
  Dicer_platform UniProtKB/TrEMBL
  Helicase_C UniProtKB/TrEMBL
  PAZ UniProtKB/TrEMBL
  Ribonuclease_3 UniProtKB/TrEMBL
PROSITE DICER_DSRBF UniProtKB/TrEMBL
  DS_RBD UniProtKB/TrEMBL
  HELICASE_ATP_BIND_1 UniProtKB/TrEMBL
  HELICASE_CTER UniProtKB/TrEMBL
  PAZ UniProtKB/TrEMBL
  RNASE_3_1 UniProtKB/TrEMBL
  RNASE_3_2 UniProtKB/TrEMBL
SMART DEXDc UniProtKB/TrEMBL
  DSRM UniProtKB/TrEMBL
  HELICc UniProtKB/TrEMBL
  PAZ UniProtKB/TrEMBL
  RIBOc UniProtKB/TrEMBL
Superfamily-SCOP dsRNA-binding domain-like UniProtKB/TrEMBL
  SSF101690 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
  SSF69065 UniProtKB/TrEMBL
UniProt A0A286ZR26_PIG UniProtKB/TrEMBL
  A0A286ZUG4 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SFG5 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SFI0 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SFK5_PIG UniProtKB/TrEMBL
  A0A4X1SFM3_PIG UniProtKB/TrEMBL
  A0A4X1SFR9_PIG UniProtKB/TrEMBL
  A0A8D0J5A6_PIG UniProtKB/TrEMBL
  A0A8D0JBH5_PIG UniProtKB/TrEMBL
  A0A8D1CQ91 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1FLS7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1S667_PIG UniProtKB/TrEMBL
  A0A8D1SB63_PIG UniProtKB/TrEMBL
  A0A8D1T9U2_PIG UniProtKB/TrEMBL
  E2JE26 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:87302 ENTREZGENE