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ONTOLOGY REPORT - ANNOTATIONS

Term:tooth mineralization
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Accession:GO:0034505 term browser browse the term
Definition:The process in which calcium salts are deposited into calcareous tooth structures such as dental enamel, dentin and cementum.
Synonyms:exact_synonym: tooth calcification


show annotations for term's descendants           Sort by:
tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMELX amelogenin X-linked involved_in ISO (PMID:1483698)
(PMID:11406633) 		BHF-UCL PMID:1483698 PMID:11406633 NCBI chr  X:8,055,246...8,063,457
Ensembl chr  X:8,055,782...8,063,449 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29533727) MGI PMID:29533727 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G TSPEAR thrombospondin type laminin G domain and EAR repeats involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:207,285,878...207,412,523
Ensembl chr13:207,285,886...207,412,511 		JBrowse link
cementum mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALPL alkaline phosphatase, biomineralization associated ISO RGD PMID:17043865 RGD:2316162 NCBI chr 6:79,589,695...79,649,646
Ensembl chr 6:79,589,045...79,649,644 		JBrowse link
G ANKH ANKH inorganic pyrophosphate transport regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:4,095,582...4,271,073
Ensembl chr16:4,105,165...4,271,170 		JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,724 		JBrowse link
G HACD1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO (PMID:25263524) UniProt PMID:25263524 NCBI chr10:43,901,590...43,929,441
Ensembl chr10:43,897,162...43,929,409 		JBrowse link
G SP7 Sp7 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:18,541,368...18,566,668
Ensembl chr 5:18,543,534...18,565,776 		JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (PMID:31059863) MGI PMID:31059863 NCBI chr 6:144,242,639...144,529,659
Ensembl chr 6:144,399,926...144,555,880 		JBrowse link
dentin mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:4,844,627...4,860,562
Ensembl chr 2:4,844,637...4,860,498 		JBrowse link
enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMELX amelogenin X-linked involved_in IMP
IBA 		(PMID:21653221) CAFA
GO_Central		 PMID:21653221 GO_REF:0000033 NCBI chr  X:8,055,246...8,063,457
Ensembl chr  X:8,055,782...8,063,449 		JBrowse link
G AMELY amelogenin, Y-linked involved_in IMP
IBA 		(PMID:21653221) CAFA
GO_Central		 PMID:21653221 GO_REF:0000033 NCBI chr  Y:10,124,811...10,132,684
Ensembl chr  Y:10,124,811...10,132,684 		JBrowse link
G CFTR CF transmembrane conductance regulator ISO RGD PMID:31942562 RGD:126928119 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950 		JBrowse link
G CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 3:56,814,823...56,858,460
Ensembl chr 3:56,814,832...56,858,453 		JBrowse link
G FAM20A FAM20A golgi associated secretory pathway pseudokinase involved_in
acts_upstream_of_or_within 		IBA
IEA 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:11,606,469...11,663,086
Ensembl chr12:11,607,034...11,657,737 		JBrowse link
G FAM20C FAM20C golgi associated secretory pathway kinase involved_in
acts_upstream_of_or_within 		IBA
ISO 		(PMID:22732358) GO_Central
MGI		 PMID:22732358 GO_REF:0000033 NCBI chr 3:159,107...200,462
Ensembl chr 3:163,421...200,459 		JBrowse link
G FOXO1 forkhead box O1 ISO RGD PMID:25183529 RGD:10044263 NCBI chr11:15,317,222...15,410,059
Ensembl chr11:15,317,124...15,410,473 		JBrowse link
G ITGB6 integrin subunit beta 6 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr15:67,041,516...67,175,409
Ensembl chr15:67,041,522...67,175,234 		JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (PMID:10742104) MGI PMID:10742104 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,765,910...49,771,789 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,304 		JBrowse link
G PPARA peroxisome proliferator activated receptor alpha acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,741...3,364,239 		JBrowse link
G ROGDI rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) MGI PMID:38172607 NCBI chr 3:37,592,982...37,600,004
Ensembl chr 3:37,591,815...37,602,112 		JBrowse link
G STIM1 stromal interaction molecule 1 involved_in ISO (PMID:24621671) UniProt PMID:24621671 NCBI chr 9:6,066,612...6,270,090
Ensembl chr 9:6,066,617...6,270,575 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:19233155) MGI PMID:19233155 NCBI chr14:51,289,376...51,297,110
Ensembl chr14:51,289,321...51,296,725 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 2:4,844,627...4,860,562
Ensembl chr 2:4,844,637...4,860,498 		JBrowse link
G WDR72 WD repeat domain 72 acts_upstream_of_or_within ISO (PMID:25008349)
(PMID:26247047) 		MGI PMID:25008349 PMID:26247047 NCBI chr 1:117,946,022...118,161,827
Ensembl chr 1:117,946,048...118,160,286 		JBrowse link
negative regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPN asporin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:42,165,553...42,192,902
Ensembl chr 3:42,165,561...42,192,813 		JBrowse link
G BCOR BCL6 corepressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:35,768,013...35,891,013
Ensembl chr  X:35,768,017...35,814,833 		JBrowse link
positive regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMTN amelotin involved_in IEA
IBA 		Ensembl
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:67,312,108...67,327,775
Ensembl chr 8:67,312,972...67,326,730 		JBrowse link
G CFTR CF transmembrane conductance regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950 		JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:16014627) MGI PMID:16014627 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761 		JBrowse link
G ENAM enamelin involved_in
acts_upstream_of_or_within 		IBA
ISO 		(PMID:24603688) GO_Central
MGI		 PMID:24603688 GO_REF:0000033 NCBI chr 8:67,416,482...67,431,196
Ensembl chr 8:67,416,469...67,433,086 		JBrowse link
G ODAPH odontogenesis associated phosphoprotein involved_in IEA
IBA 		Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:71,215,091...71,225,787
Ensembl chr 8:71,215,152...71,226,319 		JBrowse link
G SLC4A2 solute carrier family 4 member 2 involved_in ISO (PMID:26403673) ARUK-UCL PMID:26403673 NCBI chr18:6,149,459...6,166,622
Ensembl chr18:6,149,459...6,165,212 		JBrowse link
positive regulation of tooth mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G WNT6 Wnt family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:120,901,471...120,917,359
Ensembl chr15:120,901,376...120,917,486 		JBrowse link
regulation of enamel mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:20102707) MGI PMID:20102707 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,365,802...116,411,224 		JBrowse link
G DMP1 dentin matrix acidic phosphoprotein 1 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chr 8:131,285,238...131,319,398
Ensembl chr 8:131,285,330...131,313,130 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of IEA Ensembl GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18945
    developmental process 6804
      anatomical structure development 6384
        tissue development 2245
          biomineral tissue development 190
            tooth mineralization 37
              cementum mineralization 7
              dentin mineralization 1
              enamel mineralization + 24
              negative regulation of tooth mineralization + 2
              positive regulation of tooth mineralization + 8
              regulation of tooth mineralization + 13
Path 2
Term Annotations click to browse term
  biological_process 18945
    developmental process 6804
      anatomical structure development 6384
        anatomical structure morphogenesis 2959
          animal organ morphogenesis 1152
            odontogenesis 152
              tooth mineralization 37
                cementum mineralization 7
                dentin mineralization 1
                enamel mineralization + 24
                negative regulation of tooth mineralization + 2
                positive regulation of tooth mineralization + 8
                regulation of tooth mineralization + 13
paths to the root