Symbol:
ALOX5
Name:
arachidonate 5-lipoxygenase
RGD ID:
14296073
Description:
ENCODES a protein that exhibits arachidonate 5-lipoxygenase activity (inferred); dioxygenase activity (inferred); iron ion binding (inferred); INVOLVED IN positive regulation of cytochrome-c oxidase activity (ortholog); positive regulation of vasoconstriction (ortholog); response to hyperoxia (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN dendrite (ortholog); nuclear envelope (ortholog); sarcolemma (ortholog); INTERACTS WITH cadmium dichloride; deoxynivalenol; ethanol
Type:
protein-coding
RefSeq Status:
MODEL
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 14 90,859,019 - 90,907,090 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 14 90,859,209 - 90,907,084 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 14 98,902,267 - 98,950,236 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Annotations - SMPDB
ALOX5 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 14 90,859,019 - 90,907,090 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 14 90,859,209 - 90,907,084 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 14 98,902,267 - 98,950,236 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
ALOX5 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 10 45,374,216 - 45,446,117 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 10 45,374,176 - 45,446,119 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 10 45,869,664 - 45,941,565 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 10 45,189,635 - 45,261,571 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 10 45,189,691 - 45,261,567 NCBI Celera 10 41,889,257 - 41,939,521 (+) NCBI Celera Cytogenetic Map 10 q11.21 NCBI HuRef 10 42,394,884 - 42,467,216 (+) NCBI HuRef CHM1_1 10 45,908,843 - 45,980,778 (+) NCBI CHM1_1 T2T-CHM13v2.0 10 46,255,243 - 46,327,106 (+) NCBI T2T-CHM13v2.0
Alox5 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 6 116,387,030 - 116,438,139 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 6 116,387,038 - 116,438,139 (-) Ensembl GRCm39 Ensembl GRCm38 6 116,410,071 - 116,461,178 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 6 116,410,077 - 116,461,178 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 6 116,360,089 - 116,411,196 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 6 116,375,696 - 116,426,797 (-) NCBI MGSCv36 mm8 Celera 6 118,247,670 - 118,299,116 (-) NCBI Celera Cytogenetic Map 6 E3 NCBI cM Map 6 53.79 NCBI
Alox5 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 4 151,203,948 - 151,251,126 (-) NCBI GRCr8 mRatBN7.2 4 149,531,329 - 149,578,696 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 4 149,531,515 - 149,578,743 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 4 155,763,428 - 155,810,585 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 4 151,547,462 - 151,594,624 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 4 150,170,360 - 150,217,527 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 4 148,398,004 - 148,446,308 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 4 148,398,892 - 148,446,303 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 4 214,345,956 - 214,393,337 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 4 152,610,283 - 152,657,891 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 4 152,855,123 - 152,902,732 (-) NCBI Celera 4 138,415,564 - 138,454,485 (-) NCBI Celera Cytogenetic Map 4 q42 NCBI
Alox5 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955546 2,494,819 - 2,550,909 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955546 2,495,226 - 2,550,909 (+) NCBI ChiLan1.0 ChiLan1.0
ALOX5 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 8 58,201,690 - 58,271,880 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 10 58,207,019 - 58,277,209 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 10 42,461,398 - 42,531,576 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 10 45,639,946 - 45,710,016 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 10 45,639,946 - 45,710,016 (+) Ensembl panpan1.1 panPan2
ALOX5 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 28 2,170,920 - 2,218,765 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 28 2,170,920 - 2,219,609 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 28 2,405,370 - 2,462,571 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 28 2,349,844 - 2,407,164 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 28 2,349,846 - 2,407,125 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 28 2,147,070 - 2,204,281 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 28 2,183,953 - 2,241,179 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 28 2,315,780 - 2,373,040 (-) NCBI UU_Cfam_GSD_1.0
Alox5 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024407213 81,798,191 - 81,858,352 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936554 7,808,355 - 7,867,931 (-) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936554 7,807,914 - 7,848,691 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
ALOX5 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 9 41,085,257 - 41,145,760 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 9 41,085,361 - 41,145,331 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666048 764,154 - 824,908 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Alox5
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
10
4
23
3
2
5
14
12
23
3
6
3
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSSSCT00000033520 ⟹ ENSSSCP00000030319
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 Ensembl 14 90,859,019 - 90,907,090 (-) Ensembl
RefSeq Acc Id:
XM_021072736 ⟹ XP_020928395
Type:
CODING
Position:
Pig Assembly Chr Position (strand) Source Sscrofa11.1 14 90,859,209 - 90,907,084 (-) NCBI
Sequence:
GGGGCGCCCGACGGCGGAGAGAGGAAGCAGCTGTGCTGCGCAGGCTAGGTGCTGTCGCGCGGACCGGCACGTCGAGGCTGCCAGTGCTCGCTGCGCACACGACCCTCGCTGCCCGCCGCTATGCCCTC
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RefSeq Acc Id:
XP_020928395 ⟸ XM_021072736
- UniProtKB:
A0A480QV34 (UniProtKB/TrEMBL), A0A4X1V7S0 (UniProtKB/TrEMBL)
- Sequence:
MPSYTVTVATGSQWFAGTDDYIYLSLVGSAGCSEKHLLDKPFYNDFERGAVDSYDVTVDEELGDIQLIKIEKRKYWLHDDWYLKYITLKTPCGDYIEFPCYRWISGEGEIVLRDGRAKLACDDQIHVL
hide sequence
Ensembl Acc Id:
ENSSSCP00000030319 ⟸ ENSSSCT00000033520
