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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:Barth syndrome
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Accession:DOID:0050476 term browser browse the term
Definition:A 3-methylglutaconic aciduria that has_material_basis_in X-linked inheritance of the tafazzin gene and is characterized by decreased production of an enzyme required to produce cardiolipin. (DO)
Synonyms:exact_synonym: 3 methylglutaconicaciduria type 2;   3-Methylglutaconicaciduria Type II;   3-methylglutaconic aciduria type 2;   3-methylglutaconic aciduria type II;   BTHS;   MGA type 2;   MGA type II;   MGA2;   MGCA2;   X-linked cardioskeletal myopathy and neutropenia;   cardioskeletal myopathy with neutropenia and abnormal mitochondria;   cardioskeletal myopathy-neutropenia syndrome
 primary_id: MESH:D056889
 alt_id: OMIM:302060
 xref: GARD:5890;   ICD10CM:E78.71;   NCI:C84585;   ORDO:111
For additional species annotation, visit the Alliance of Genome Resources.


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Barth syndrome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnase1l1 deoxyribonuclease 1-like 1 ISO ClinVar Annotator: match by term: 3-Methylglutaconic aciduria type 2 | ClinVar Annotator: match by term: Cardioskeletal myopathy with neutropenia and abnormal mitochondria ClinVar PMID:1719174 PMID:9345098 PMID:9536098 PMID:11238270 PMID:15793838 More... NCBI chr  X:152,056,942...152,065,518
Ensembl chr  X:152,056,942...152,065,518 		JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A ISS OMIM:302060 MouseDO NCBI chr 3:140,040,359...140,060,107
Ensembl chr 3:140,040,278...140,060,743 		JBrowse link
G Mest mesoderm specific transcript ISS OMIM:302060 MouseDO NCBI chr 4:59,354,445...59,364,919
Ensembl chr 4:59,354,447...59,366,145 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: 3-Methylglutaconic aciduria type 2 | ClinVar Annotator: match by term: Cardioskeletal myopathy with neutropenia and abnormal mitochondria | ClinVar Annotator: match by term: MGA type II		 OMIM
CTD
ClinVar		 PMID:1719174 PMID:1998334 PMID:4685904 PMID:6142097 PMID:7616547 More... NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18246
    syndrome 9798
      Barth syndrome 4
        Dilated Cardiomyopathy, Neutropenia, Skeletal Myopathy, and Abnormal Mitochondria 0
        Noncompaction of Left Ventricular Myocardium, Familial Isolated, X-Linked 0
Path 2
Term Annotations click to browse term
  disease 18246
    Developmental Disease 13102
      Congenital, Hereditary, and Neonatal Diseases and Abnormalities 11857
        genetic disease 11365
          inherited metabolic disorder 4713
            amino acid metabolic disorder 831
              organic acidemia 97
                3-methylglutaconic aciduria 14
                  Barth syndrome 4
                    Dilated Cardiomyopathy, Neutropenia, Skeletal Myopathy, and Abnormal Mitochondria 0
                    Noncompaction of Left Ventricular Myocardium, Familial Isolated, X-Linked 0
paths to the root